BAC Information

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BAC

Clone NameB6Ng01-277B04
Chromosome7 (Build37)
Map Location 60,052,605 - 60,234,331
singlet/doubletdoublet
Overlap geneLOC100040692
Upstream geneLOC100040608, Gas2, 1700015G11Rik, EG668783, EG620782
Downstream geneGm1865, LOC100040718, LOC668789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277B04.bB6Ng01-277B04.g
ACCGA077688GA077689
length1,1741,143
definitionB6Ng01-277B04.b B6Ng01-277B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,052,605 - 60,053,788)(60,233,181 - 60,234,331)
sequence
gaattctcacctgatgaataccgattgactgaaaagcacctgaaaaaatg
ttcagcatccttaatcatcaggaaaatacaaatcaaaacaaccctgagat
tccacctcacaatagtcagaatggctaagaccaaaaattcaggtgacaac
agatgctggctaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaaacttgtacaaccactgtggaattcagtctggtgtttcctca
gaaaattagatatattactacgggtggatcccgcaatacctcttctaagc
atatatccaactggtaaaaaggacacatgctccactatgttcatagcagc
cttattctatatgcttttgaaatgtgaatgaatgtggcaattagtctgaa
gtctgaaaaaaattatttattttcttattcatttcactagagggtaaata
atttgtctagtattgtctagattattttctttaacctttctctatttcca
tgttcatataatgtaatgatcgcccaatatacgtgtactattagattggc
aagctaaaattatgggctcccatcacatattctacctctgtccacaatat
ggtgtggtacccagtaacatcactgtgccctatggaacctcagaaaataa
aatggatacagggcttacatagtgctttcagttcggggtttcaagttatt
tgcatacaaggaatctatgtaggattgacttgctgaggacaaaggggcta
tgttagacagtacctacatggaagtaagatcactctggatttcctatcat
tataatattagacatatcagttatagctgcacatggtccactgagaacag
agtaacactctgagagaaatacatggtggttcccttaagctattatattt
tagggtcatttattaaatattatgagcttattggtcaaatgtgtcctgtc
tgcttaaaatcaatttcgtgattgccttatttcaccaggagtgaacacct
ttcctacagtaagaagccattagctatgtctgagctctcctcaatctttt
tttctgacgaaaaaattatattttttgaataacattattgagacttggta
gcattggcctttcttgaacttactatgtagaacagactgaattccaactc
cagttatctgactgctgctgtctc

gaattcaacagattcttgtttatatttataactttttctaggcagtcaat
atttaacccaatccttggacacctgtaaattcatgaagattataaacttt
tatattctacttttaaaaagtcaggaaaaagtggtttgaatatatttgac
tcatgggcagtggcactattagaaggtatggctctgttggaataggtatg
gccctgttgaaggaagtatttcactatgtgggtgggctttgaggactctt
aatgctcaggctctgcccactacaaaagaaaccccctcctggttgccttc
caacaagatgtaaaactctcatctccttctagagcaccaggtctgcctta
atactgtgatgcttcctgccatgataatgaactgaacctctgaaaatgta
agtcaccctcaagttaatgttttctttggtaagagagaaaagaaaggaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagag
agagagagagagggagagagagagagagagagaatggaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggaa
ggaaggaaggaaggaaggaaggaaggaagaaagagagaggtaaaatttga
aaaccatggctctcaattcactgtgtaatctatagattgagccttggtcc
ttattggtgctaatcaattttccaaaacaagaaatacccctgtttttctt
ttatgcactaaagttcctctcattcccacagagacagattgctgaaagtc
ttggctttgacctcagttttgtactgggaagcacataaaactcaacattt
cttaatgccttctctgagccactcccagcctctcaggaagatgtgagact
cacatcaccctgaagatgtgagactttgttctactctattcagttccaga
aatgacttgaaattgatggcactttcaccattatcacacatcttttcctc
cctctactcctaaatactctcatatatatctcaatatcatatggtgactt
gctctcatcaactaggctcttaagatttttcctcttcgggatccaatttt
gttaagcactggatagctctgaagtctgatctccgaacatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60052605_60053788
seq2: B6Ng01-277B04.b_48_1221

seq1  GAATTCTCACCTGATGAATACCGATTGACTGAAAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGATGAATACCGATTGACTGAAAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCCTTAATCATCAGGAAAATACAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGGAAAATACAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACAATAGTCAGAATGGCTAAGACCAAAAATTCAGGTGACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACAATAGTCAGAATGGCTAAGACCAAAAATTCAGGTGACAAC  150

seq1  AGATGCTGGCTAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCTAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAAACTTGTACAACCACTGTGGAATTCAGTCTGGTGTTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAACTTGTACAACCACTGTGGAATTCAGTCTGGTGTTTCCTCA  250

seq1  GAAAATTAGATATATTACTACGGGTGGATCCCGCAATACCTCTTCTAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAGATATATTACTACGGGTGGATCCCGCAATACCTCTTCTAAGC  300

seq1  ATATATCCAACTGGTAAAAAGGACACATGCTCCACTATGTTCATAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAACTGGTAAAAAGGACACATGCTCCACTATGTTCATAGCAGC  350

seq1  CTTATTCTATATGCTTTTGAAATGTGAATGAATGTGGCAATTAGTCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTATATGCTTTTGAAATGTGAATGAATGTGGCAATTAGTCTGAA  400

seq1  GTCTGAAAAAAATTATTTATTTTCTTATTCATTTCACTAGAGGGTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAAAAAATTATTTATTTTCTTATTCATTTCACTAGAGGGTAAATA  450

seq1  ATTTGTCTAGTATTGTCTAGATTATTTTCTTTAACCTTTCTCTATTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTAGTATTGTCTAGATTATTTTCTTTAACCTTTCTCTATTTCCA  500

seq1  TGTTCATATAATGTAATGATCGCCCAATATACGTGTACTATTAGATTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATATAATGTAATGATCGCCCAATATACGTGTACTATTAGATTGGC  550

seq1  AAGCTAAAATTATGGGCTCCCATCACATATTCTACCTCTGTCCACAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAAAATTATGGGCTCCCATCACATATTCTACCTCTGTCCACAATAT  600

seq1  GGTGTGGTACCCAGTAACATCACTGTGCCCTATGGAACCTCAGAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGTACCCAGTAACATCACTGTGCCCTATGGAACCTCAGAAAATAA  650

seq1  AATGGATACAGGGCTTACATAGTGCTTTCAGTTCGGGGTTTCAAGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATACAGGGCTTACATAGTGCTTTCAGTTCGGGGTTTCAAGTTATT  700

seq1  TGCATACAAGGAATCTATGTAGGATTGACTTGCTGAGGACAAAGGGGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACAAGGAATCTATGTAGGATTGACTTGCTGAGGACAAAGGGGCTA  750

seq1  TGTTAGACAGTACCTACATGGAAGTAAGATCACTCTGGATTTCCTATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGACAGTACCTACATGGAAGTAAGATCACTCTGGATTTCCTATCAT  800

seq1  TATAATATTAGACATATCAGTTATAGCTGCACATGGTCCACTGAGAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTAGACATATCAGTTATAGCTGCACATGGTCCACTGAGAACAG  850

seq1  AGTAACACTCTGAGAGAAATACATGGTGGTTCCCTTAAGCTATTATATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACACTCTGAGAGAAATACATGGTGGTTCCCTTAAGCTATTATATTT  900

seq1  TAGGGTCATTTATTAAATATTATGAGCTTATTGGTCAAATGTGTCCTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCATTTATTAAATATTATGAGCTTATTGGTCAAATGTGTCCTGTC  950

seq1  TGCTTTAAAAATCAATTTCGTGATTTGCCTTATTTCACCAGGAGTGAACA  1000
      |||||  |||||||||||||||| ||||||||||||||||||||||||| 
seq2  TGCTT--AAAATCAATTTCGTGA-TTGCCTTATTTCACCAGGAGTGAAC-  996

seq1  ACCTTTCCTACAGTAAG-AGCCATTAGCTATGTCTTGAGGCTCTCCTCCA  1049
      ||||||||||||||||| |||||||||||||||| ||| ||||||||| |
seq2  ACCTTTCCTACAGTAAGAAGCCATTAGCTATGTC-TGA-GCTCTCCTCAA  1044

seq1  TCTTTTTTTCTGACGAAAAAAATTATA-TTTTTGAATAACATTTTATTTT  1098
      ||||||||||||||| ||||||||||| ||||||||||||||    | ||
seq2  TCTTTTTTTCTGACG-AAAAAATTATATTTTTTGAATAACAT----TATT  1089

seq1  GAGACTGGGTAGCCATGGCTGTCCTTGAACTTACTATGTAGACAAGACTG  1148
      |||||| ||||||  ||||  | |||||||||||||||||||  ||||||
seq2  GAGACTTGGTAGCATTGGCCTTTCTTGAACTTACTATGTAGAACAGACTG  1139

seq1  ATCTCAAACTCACAGTTATCTGCCTGCTGCTGTCTC  1184
      |  || ||||| |||||||||| |||||||||||||
seq2  AATTCCAACTC-CAGTTATCTGACTGCTGCTGTCTC  1174


seq1: chr7_60233181_60234331
seq2: B6Ng01-277B04.g_68_1210 (reverse)

seq1  TTCATGTT-TGAGAACAAGAATTCAGAGCTAT-CAGTGCTT-ACAAAAAT  47
      ||||||||  |||| | ||| ||||||||||| |||||||| |||||| |
seq2  TTCATGTTCGGAGATC-AGACTTCAGAGCTATCCAGTGCTTAACAAAATT  49

seq1  GGAT-CCGAAGA-GAAAAATCTAAAGGAGCTAGTTGATGGAGGAGCAGGT  95
      |||| ||||||| ||||||||| |||   ||||||||||   ||||| ||
seq2  GGATCCCGAAGAGGAAAAATCTTAAGAGCCTAGTTGATG--AGAGCAAGT  97

seq1  CACCATAATGATAATGAGATAATATATGAGAGTAATTTAGGAGTAGGAGG  145
      |||||| |||||| |||||| |||||||||||| ||||||||||| ||||
seq2  CACCAT-ATGATATTGAGAT-ATATATGAGAGT-ATTTAGGAGTA-GAGG  143

seq1  GAGGAAAAGATGTGTGATAATGGTGAAAGTGCCAATCAATTTCAAAGTCA  195
      ||||||||||||||||||||||||||||||||| ||||||||| ||||| 
seq2  GAGGAAAAGATGTGTGATAATGGTGAAAGTGCC-ATCAATTTC-AAGTC-  190

seq1  ATTTCTGGAACTG-ATAGAGTAGAACAAAGTCTCACATCTTCAGGGTGAT  244
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGAACTGAATAGAGTAGAACAAAGTCTCACATCTTCAGGGTGAT  240

seq1  GTGAGTCTCACATCTTCCTGAGAGGCTGGGAGTGGCTCAGAGAAGGCATT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCTCACATCTTCCTGAGAGGCTGGGAGTGGCTCAGAGAAGGCATT  290

seq1  AAGAAATGTTGAGTTTTATGTGCTTCCCAGTACAAAACTGAGGTCAAAGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTTGAGTTTTATGTGCTTCCCAGTACAAAACTGAGGTCAAAGC  340

seq1  CAAGACTTTCAGCAATCTGTCTCTGTGGGAATGAGAGGAACTTTAGTGCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTTCAGCAATCTGTCTCTGTGGGAATGAGAGGAACTTTAGTGCA  390

seq1  TAAAAGAAAAACAGGGGTATTTCTTGTTTTGGAAAATTGATTAGCACCAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAAAACAGGGGTATTTCTTGTTTTGGAAAATTGATTAGCACCAA  440

seq1  TAAGGACCAAGGCTCAATCTATAGATTACACAGTGAATTGAGAGCCATGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACCAAGGCTCAATCTATAGATTACACAGTGAATTGAGAGCCATGG  490

seq1  TTTTCAAATTTTACCTCTCTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATTTTACCTCTCTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCT  540

seq1  TCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  594
      ||||||    ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTC----CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  586

seq1  CTTTCTTTCTTTCTTTCTTTCCATTCTCTCTCTCTCTCTCTCTCCCTCTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCCATTCTCTCTCTCTCTCTCTCTCCCTCTC  636

seq1  TCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  686

seq1  TTTCTTTCTTCCTTTCTTTTCTCTCTTACCAAAGAAAACATTAACTTGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTCCTTTCTTTTCTCTCTTACCAAAGAAAACATTAACTTGAG  736

seq1  GGTGACTTACATTTTCAGAGGTTCAGTTCATTATCATGGCAGGAAGCATC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTTACATTTTCAGAGGTTCAGTTCATTATCATGGCAGGAAGCATC  786

seq1  ACAGTATTAAGGCAGACCTGGTGCTCTAGAAGGAGATGAGAGTTTTACAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATTAAGGCAGACCTGGTGCTCTAGAAGGAGATGAGAGTTTTACAT  836

seq1  CTTGTTGGAAGGCAACCAGGAGGGGGTTTCTTTTGTAGTGGGCAGAGCCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGAAGGCAACCAGGAGGGGGTTTCTTTTGTAGTGGGCAGAGCCT  886

seq1  GAGCATTAAGAGTCCTCAAAGCCCACCCACATAGTGAAATACTTCCTTCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTAAGAGTCCTCAAAGCCCACCCACATAGTGAAATACTTCCTTCA  936

seq1  ACAGGGCCATACCTATTCCAACAGAGCCATACCTTCTAATAGTGCCACTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCCATACCTATTCCAACAGAGCCATACCTTCTAATAGTGCCACTG  986

seq1  CCCATGAGTCAAATATATTCAAACCACTTTTTCCTGACTTTTTAAAAGTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGTCAAATATATTCAAACCACTTTTTCCTGACTTTTTAAAAGTA  1036

seq1  GAATATAAAAGTTTATAATCTTCATGAATTTACAGGTGTCCAAGGATTGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAAAAGTTTATAATCTTCATGAATTTACAGGTGTCCAAGGATTGG  1086

seq1  GTTAAATATTGACTGCCTAGAAAAAGTTATAAATATAAACAAGAATCTGT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATATTGACTGCCTAGAAAAAGTTATAAATATAAACAAGAATCTGT  1136

seq1  TGAATTC  1151
      |||||||
seq2  TGAATTC  1143


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