BAC Information

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BAC

Clone NameB6Ng01-277B11
Chromosome7 (Build37)
Map Location 48,285,521 - 48,286,619
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628161, LOC100039094, 2900093B09Rik, 4930433I11Rik
Downstream geneEG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277B11.bB6Ng01-277B11.g
ACCGA077702GA077703
length1,123804
definitionB6Ng01-277B11.b B6Ng01-277B11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaggatagttctccatcaaaggccttccctcagatctaagag
aagcacacagttgtggatatgaaatgaatatatgagccaggtggtgtgga
agacacgtcaacaaggtcctctgaataaaaaaataaaaataaaagctctt
cccagctaagagacactaaagtggtaggcagagtccctacatatgtctgg
aacaggtcctttgcatatatatcatttcaatattagtttagtatttttat
gggaatagtagctatgaggacaagtaggtctcttattttgatgactgcac
gtgggcctcttttactcctatcatttagccatattacactttgaaatgat
aaatttcctccttctcagtatattttttatttgtttgtttgtttgttgtc
cttgtaaagcctgttctttcctaatgaaagatgcaaactgaagggaaact
gaggagtgaggggtttggaatgagcaagaatgtagagataaatgaatcta
aaatcaggatacattctaaaagggaaaattaaatgaatcaatgtaaaaaa
ttttaaatgaataaacagaatgagattaaaaagtacaagttacattctct
ctctttgtatctaccccttttctctctgtatgcatgtgtttcttgtgttt
gcctgtttccttcttcctctccctcctctactccatctatctcttctctc
aatctgcttaatttcagactcctggcaatactaatcttgagtctacaatg
ctacagaaggacaatgtttttttttttttccctgtgccatctacaaccag
gagcatactttcaagcatgatcttggcaaatgtgtcaattatttaacagc
tgacagaagaggagtgaatctcattttctgacgtcatgtggaaaataaca
ttcttactgcagaaatttgtcccaactaaacaacttccactgtcggcatg
gagggacatttgtacagaactaggcatgcagctgcattaaacagcaccag
ctcagagtaaaagccctgagttaacattctagacctcatgtgactgctgg
agacagttaaatggctctatatcaattttaatattcacactgttgtatta
gtcatgccttggtggaggtagat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattccttagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtattcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
ggagaatgaagactgaagtgtgggacactatgcccctccttagattggga
acaaaacacccatggaagagttacagagacggagtttgagctgacatgaa
agatggaccatgtagagactgccatagcagggatccaccccgtaatcagt
ctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48285521_48286619
seq2: B6Ng01-277B11.b_77_1167

seq1  TTCCCTCAGATCTAAGAGAAGCACACAGTTGTGGATATGAAATGAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAGATCTAAGAGAAGCACACAGTTGTGGATATGAAATGAATATA  50

seq1  TGAGCCAGGTGGTGTGGAAGACACGTCAACAAGGTCCTCTGAATAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGGTGGTGTGGAAGACACGTCAACAAGGTCCTCTGAATAAAAAA  100

seq1  ATAAAAATAAAAGCTCTTCCCAGCTAAGAGACACTAAAGTGGTAGGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAAAGCTCTTCCCAGCTAAGAGACACTAAAGTGGTAGGCAGA  150

seq1  GTCCCTACATATGTCTGGAACAGGTCCTTTGCATATATATCATTTCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTACATATGTCTGGAACAGGTCCTTTGCATATATATCATTTCAATA  200

seq1  TTAGTTTAGTATTTTTATGGGAATAGTAGCTATGAGGACAAGTAGGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAGTATTTTTATGGGAATAGTAGCTATGAGGACAAGTAGGTCTC  250

seq1  TTATTTTGATGACTGCACGTGGGCCTCTTTTACTCCTATCATTTAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGATGACTGCACGTGGGCCTCTTTTACTCCTATCATTTAGCCAT  300

seq1  ATTACACTTTGAAATGATAAATTTCCTCCTTCTCAGTATATTTTTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTTTGAAATGATAAATTTCCTCCTTCTCAGTATATTTTTTATTT  350

seq1  GTTTGTTTGTTTGTTGTCCTTGTAAAGCCTGTTCTTTCCTAATGAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTGTCCTTGTAAAGCCTGTTCTTTCCTAATGAAAGAT  400

seq1  GCAAACTGAAGGGAAACTGAGGAGTGAGGGGTTTGGAATGAGCAAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTGAAGGGAAACTGAGGAGTGAGGGGTTTGGAATGAGCAAGAATG  450

seq1  TAGAGATAAATGAATCTAAAATCAGGATACATTCTAAAAGGGAAAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATAAATGAATCTAAAATCAGGATACATTCTAAAAGGGAAAATTAA  500

seq1  ATGAATCAATGTAAAAAATTTTAAATGAATAAACAGAATGAGATTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCAATGTAAAAAATTTTAAATGAATAAACAGAATGAGATTAAAAA  550

seq1  GTACAAGTTACATTCTCTCTCTTTGTATCTACCCCTTTTCTCTCTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTTACATTCTCTCTCTTTGTATCTACCCCTTTTCTCTCTGTATG  600

seq1  CATGTGTTTCTTGTGTTTGCCTGTTTCCTTCTTCCTCTCCCTCCTCTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTCTTGTGTTTGCCTGTTTCCTTCTTCCTCTCCCTCCTCTACT  650

seq1  CCATCTATCTCTTCTCTCAATCTGCTTAATTTCAGACTCCTGGCAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTATCTCTTCTCTCAATCTGCTTAATTTCAGACTCCTGGCAATACT  700

seq1  AATCTTGAGTCTACAATGCTACAGAAGGACAATGTTTTTTTTTTTTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGAGTCTACAATGCTACAGAAGGACAATGTTTTTTTTTTTTTCCC  750

seq1  TGTGCCATCTACAACCAGGAGCATACTTTCAAGCATGATCTTGGCAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCATCTACAACCAGGAGCATACTTTCAAGCATGATCTTGGCAAATG  800

seq1  TGTCAAATTATTTAACAGCTGACAGAAGAGGAGTGAATCTCA-TTTCTGA  849
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTC-AATTATTTAACAGCTGACAGAAGAGGAGTGAATCTCATTTTCTGA  849

seq1  CGTCATGTGGAAAATAACATTCTTACTGCAGAAATTTGTCCCAAACTAAA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CGTCATGTGGAAAATAACATTCTTACTGCAGAAATTTGTCCC-AACTAAA  898

seq1  CAACTTTCCACTGTCGGCATGGAGGGACATTTGTACAGAACTAGGCATGC  949
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAC-TTCCACTGTCGGCATGGAGGGACATTTGTACAGAACTAGGCATGC  947

seq1  AGCTGCATTAAACAGCACCAGCTCAGAGTAAAAGCCCCTGAGTAAACATT  999
      |||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  AGCTGCATTAAACAGCACCAGCTCAGAGTAAAAG-CCCTGAGTTAACATT  996

seq1  CTAGAACCTCATGTGACTGCTGGAGGACAGTTAAAATGGCTCTAATATCA  1049
      |||| ||||||||||||||||||| ||||||| |||||||||| ||||||
seq2  CTAG-ACCTCATGTGACTGCTGGA-GACAGTT-AAATGGCTCT-ATATCA  1042

seq1  TTTTTAATTAATCAACACTGTTGTATTAGTTAATGCTTTGT-GAGGTAGA  1098
       |||||||  ||  |||||||||||||||| |   ||| || ||||||||
seq2  ATTTTAAT--ATTCACACTGTTGTATTAGTCATGCCTTGGTGGAGGTAGA  1090

seq1  T  1099
      |
seq2  T  1091