BAC Information

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BAC

Clone NameB6Ng01-278B11
Chromosome7 (Build37)
Map Location 26,871,737 - 26,872,900
singlet/doubletsinglet
Overlap geneCyp2b13
Upstream genePou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, EG668047
Downstream geneLOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278B11.bB6Ng01-278B11.g
ACCGA078427GA078428
length9921,178
definitionB6Ng01-278B11.b B6Ng01-278B11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcattgatacagaaagggcagtttgcaaattcacgtggaataa
tacaaaaactaggatagcaaaaactattctcaacaataaaagaacctctg
gtggaatcaccaggcctgatattaagctgtactacagaggaattctgata
aaaactgcatggtactggtactttgacagacaggtagatcaatggaatag
aattgaagacccagaaatgaatccacacatgtatggtcacttgatctttg
acaagggagataaaaccatccagtggaaaaatgacagcattttcaaaaaa
tggtgctggcacaacaggcggttatcatgtagaagaatggtaattgattc
attcttatctccttgtataaacctcaagtctaagtggatcaagaaactcc
acttaaaaccagagacactaaaacttacagaggagaatgtagggaaaagc
ctcgaagatatgggcataggggaaaaattcctgaatagaacagcagtagc
ttgtgctgaaagatcaaggattgacaaatgggacctcataaaattgctgt
gcttatataaggcaaaagactgttaataagacaaaaaggccaccaagaga
ttgggaaagaatctttaccaatcctaaatcagataggggactaatatcca
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatctagaaatagggagtataaaatggggtacagagc
taaaacaaagaattttcaactgaggaataacaaatggctgagaagcaccc
tgaaaaatgttcaacatacttatcatcagggaaatgcaaataaaacaacc
ctgagttgcacctcacaccagtcagaatagctagatcaaaaataaagtga
ctgctttgcttggcgaggatgtgaagagaggacactccttcattgttggt
aggagtgtcagcgttgtacagacgcacttatgaaagtaagtt
gaattctgaaggctttgctatacttctatactaaggcagtggctggtggt
gtgtgaatgaacactcagctgaccagttttctgttattttcccctatcac
taaaagttttatccaatcatctatccatccatccacctactcctccattt
atccattttctgtccatctatcaatctattcattcatctatcccccatgc
acctgtatgccatccatccatccatccatccttccattcatcaatgtatc
attcctttcttccctccatctcttccttccaccttccttcaatctttaca
ttcatatattattcatatttctatacatccacttctccatcaatctactt
atactgttcatccacccacctatttgtacacccatcaatgaacctgtcat
tggcctctctcttcagtcattctcacacaactaagcaccaacctacctaa
aggcctatttactcactcatccttctatcttcttgctaaacatttattca
caaatacacacatgaatggacagatgtatgtatgcacttgtgtgcatgtg
cccatgtatgcacacacacagagacacgggcacatgtatgtgtgcgaaca
cacacacacacacacacacacacacacacacacacacacacatacaaatc
ttcccagtcaaccatccaattctaaatcaactgattatttgtgtgcttat
tgattttttaatcaccaaagtaggcatttatttatttatttgaatgaatc
aacttaagtgttttcctttgatcagcagagttgaataaaatattgggcca
tcgattcattcatacactcatctctcattctatcaacaggtttcatttca
taatccttttcactaagtggcctttgattcccttttctgtttgtctattc
aaatcctcactcatccactaatttgaatcatttgttgacttacaagttga
atacacaatccagtactagtggtgttcattacttcaggaatctgtcaata
tatttcattttatcaatggattttccttaatataattcattttctaacat
ggtgtcctaatgaatggattatttactaatttaccaaacttctctctgta
acattctgtttggacctagccttcaggtcttaataaaggttcatgttcaa
gaaattggtgtgtgtgtgtcgtgatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_26871737_26872900
seq2: B6Ng01-278B11.g_68_1245

seq1  GAATTCTGAAGGCTTTGCTATACTTCTATACTAAGGCAGTGGCTGGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGGCTTTGCTATACTTCTATACTAAGGCAGTGGCTGGTGGT  50

seq1  GTGTGAATGAACACTCAGCTGACCAGTTTTCTGTTATTTTCCCCTATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAATGAACACTCAGCTGACCAGTTTTCTGTTATTTTCCCCTATCAC  100

seq1  TAAAAGTTTTATCCAATCATCTATCCATCCATCCACCTACTCCTCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTTTATCCAATCATCTATCCATCCATCCACCTACTCCTCCATTT  150

seq1  ATCCATTTTCTGTCCATCTATCAATCTATTCATTCATCTATCCCCCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTTCTGTCCATCTATCAATCTATTCATTCATCTATCCCCCATGC  200

seq1  ACCTGTATGCCATCCATCCATCCATCCATCCTTCCATTCATCAATGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTATGCCATCCATCCATCCATCCATCCTTCCATTCATCAATGTATC  250

seq1  ATTCCTTTCTTCCCTCCATCTCTTCCTTCCACCTTCCTTCAATCTTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCTTCCCTCCATCTCTTCCTTCCACCTTCCTTCAATCTTTACA  300

seq1  TTCATATATTATTCATATTTCTATACATCCACTTCTCCATCAATCTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATTATTCATATTTCTATACATCCACTTCTCCATCAATCTACTT  350

seq1  ATACTGTTCATCCACCCACCTATTTGTACACCCATCAATGAACCTGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTCATCCACCCACCTATTTGTACACCCATCAATGAACCTGTCAT  400

seq1  TGGCCTCTCTCTTCAGTCATTCTCACACAACTAAGCACCAACCTACCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCTCTCTTCAGTCATTCTCACACAACTAAGCACCAACCTACCTAA  450

seq1  AGGCCTATTTACTCACTCATCCTTCTATCTTCTTGCTAAACATTTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTATTTACTCACTCATCCTTCTATCTTCTTGCTAAACATTTATTCA  500

seq1  CAAATACACACATGAATGGACAGATGTATGTATGCACTTGTGTGCATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACACACATGAATGGACAGATGTATGTATGCACTTGTGTGCATGTG  550

seq1  CCCATGTATGCACACACACAGAGACACGGGCACATGTATGTGTGCGAACA  600
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CCCATGTATGCACACACACAGAGACACGGGCACATGTATGTGTGCGA---  597

seq1  CACACACACACACACACACACACACACACACACACACACACACACATACA  650
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ACACACACACACACACACACACACACACACACACACACACACACATACA  646

seq1  AATCTTCCCAGTCAACCATCCAATTCTAAATCAACTGATTATTTGTGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCCAGTCAACCATCCAATTCTAAATCAACTGATTATTTGTGTGC  696

seq1  TTATTGATTTTTTAATCACCAAAGTAGGCATTTATTTATTTATTTGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATTTTTTAATCACCAAAGTAGGCATTTATTTATTTATTTGAATG  746

seq1  AATCAACTTAAGTGTTTTCCTTTGATCAGCAGAGTTGAATAAAATATT-G  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATCAACTTAAGTGTTTTCCTTTGATCAGCAGAGTTGAATAAAATATTGG  796

seq1  GCCATCGATTCATTCATACACTCATCTCTCATTCTATCAACAGGTTTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCGATTCATTCATACACTCATCTCTCATTCTATCAACAGGTTTCAT  846

seq1  TTCATAATCC-TTTCACTAAGTGGCCTTTGATTCCCTTTTCTGTTTGTCT  898
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATCCTTTTCACTAAGTGGCCTTTGATTCCCTTTTCTGTTTGTCT  896

seq1  ATCCAATTCCTCACTCATCCACTAA-TTGAATCATTTGTTGACTTACAAG  947
      || ||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTCAAATCCTCACTCATCCACTAATTTGAATCATTTGTTGACTTACAAG  946

seq1  TTGAATACACAATCCAGTACTTAGT-GTGTTCATTAACTCAGGAATCTGT  996
      |||||||||||||||||||| |||| ||||||||||  ||||||||||||
seq2  TTGAATACACAATCCAGTAC-TAGTGGTGTTCATTACTTCAGGAATCTGT  995

seq1  CCATATA-TTCA-TTTATCCATTGATTTTC--TTATAT-ATTCA-TTTCT  1040
      | ||||| |||| |||||| || |||||||  | |||| ||||| |||||
seq2  CAATATATTTCATTTTATCAATGGATTTTCCTTAATATAATTCATTTTCT  1045

seq1  -ACAT-GTGT-CTATTGATTGATTAATTTACTAATTTACC-AACT--TCT  1084
       |||| |||| ||| ||| ||  | ||||||||||||||| ||||  |||
seq2  AACATGGTGTCCTAATGAATGGATTATTTACTAATTTACCAAACTTCTCT  1095

seq1  CTGTTACATTTCTGTT--GACATAGCTTCAAGTTCTTAATATAAAGTTCC  1132
      |||| ||| |||||||  ||| |||| |  || |||||  |||||| | |
seq2  CTGTAACA-TTCTGTTTGGACCTAGCCTTCAGGTCTTA--ATAAAGGTTC  1142

seq1  ATG-TCAAG-ATGTGGTGTGTGTGTG-CGTG-TGTG  1164
      ||| ||||| |  ||||||||||||| |||| ||||
seq2  ATGTTCAAGAAATTGGTGTGTGTGTGTCGTGATGTG  1178