BAC Information

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BAC

Clone NameB6Ng01-278D21
Chromosome7 (Build37)
Map Location 29,758,924 - 29,950,783
singlet/doubletdoublet
Overlap geneEif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3
Upstream geneZfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4
Downstream geneGgn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278D21.bB6Ng01-278D21.g
ACCGA078539GA078540
length1,058182
definitionB6Ng01-278D21.b B6Ng01-278D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,758,924 - 29,759,992)(29,950,602 - 29,950,783)
sequence
gaattccaggaggacagcactacacctggtcagggtgttttcgaggcagt
gtctcactacatagccctggttggccttgaactcatggagatacagaagg
caacatcctataccaaaccctcacccacactctggggcaggtaacaacct
cggaaaggtgcggtgggttcccctgagctgcctgaggccccatgccccaa
ccaccttttcctctcagactgacagaaacagcaccaggcctcaccagtca
ggtctccgagcatctcggccagcagccagcggtcgatgtgctggtacgtg
atgcccaccacgtggcagataactgtgagaatcaaaacaaagacagtcaa
gaggccgctggcacgtaatccaggaacggagctgtgtgagaattctgagg
gctcttctgtgtcccccgcaggtgtagtaaacagcaagggcttgctccag
attacacacagctgcttctgttattaaaaaaccacttccaagcgcagctt
tatcctcggggctgtatatggcttgaactttgggaactgtgctcgtatga
ccatgcttaactttcagaatataaacttatgctctaaataaaattggcta
ttgcacaaggcccagtctgcctcatttttaatcccccttctcccaagtcc
ctgctacactgccttaagccctcgggaacccaggctcccaggactcacat
tttcggacagagtcttcaaagccagttatgccttccagaaggtccatgtt
ctcatccagggcttgctgtggaagaaaggatgccccagtattaacactag
caccatcactcagcattaaccagtcagtgctgacgttgtggaggctgaga
caggagggatcaaaagttctgagtcagcagtgtgagcaatcccgggtaca
ggagatcgtgcctctgcctgcctgcctgcctgcccacctgcccgcccctg
tctctggtttagacaggtttctctgtgtagccctagcagtctggactgac
ctgaaaaccagtggcctttgactaaaaaatccacctgcctctgctggctg
ggcgtcca
agagatccacttccctctacctcccaagtgctgggattaaaggcgtgcac
caaaaccacccttgtatgaattgataattctatcttctacttactgctca
agctgcaggcttgtaaatttggagtcatctttgactccattgttcatttg
tttatttgttgggtttttttggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29758924_29759992
seq2: B6Ng01-278D21.b_46_1103

seq1  GAATTCCAGGAGGACAGCACTACACCTGGTCAGGGTGTTTTCGAGGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAGGACAGCACTACACCTGGTCAGGGTGTTTTCGAGGCAGT  50

seq1  GTCTCACTACATAGCCCTGGTTGGCCTTGAACTCATGGAGATACAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTACATAGCCCTGGTTGGCCTTGAACTCATGGAGATACAGAAGG  100

seq1  CAACATCCTATACCAAACCCTCACCCACACTCTGGGGCAGGTAACAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCTATACCAAACCCTCACCCACACTCTGGGGCAGGTAACAACCT  150

seq1  CGGAAAGGTGCGGTGGGTTCCCCTGAGCTGCCTGAGGCCCCATGCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAGGTGCGGTGGGTTCCCCTGAGCTGCCTGAGGCCCCATGCCCCAA  200

seq1  CCACCTTTTCCTCTCAGACTGACAGAAACAGCACCAGGCCTCACCAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTTTCCTCTCAGACTGACAGAAACAGCACCAGGCCTCACCAGTCA  250

seq1  GGTCTCCGAGCATCTCGGCCAGCAGCCAGCGGTCGATGTGCTGGTACGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCGAGCATCTCGGCCAGCAGCCAGCGGTCGATGTGCTGGTACGTG  300

seq1  ATGCCCACCACGTGGCAGATAACTGTGAGAATCAAAACAAAGACAGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCACCACGTGGCAGATAACTGTGAGAATCAAAACAAAGACAGTCAA  350

seq1  GAGGCCGCTGGCACGTAATCCAGGAACGGAGCTGTGTGAGAATTCTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCGCTGGCACGTAATCCAGGAACGGAGCTGTGTGAGAATTCTGAGG  400

seq1  GCTCTTCTGTGTCCCCCGCAGGTGTAGTAAACAGCAAGGGCTTGCTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTGTGTCCCCCGCAGGTGTAGTAAACAGCAAGGGCTTGCTCCAG  450

seq1  ATTACACACAGCTGCTTCTGTTATTAAAAAACCACTTCCAAGCGCAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACACAGCTGCTTCTGTTATTAAAAAACCACTTCCAAGCGCAGCTT  500

seq1  TATCCTCGGGGCTGTATATGGCTTGAACTTTGGGAACTGTGCTCGTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCGGGGCTGTATATGGCTTGAACTTTGGGAACTGTGCTCGTATGA  550

seq1  CCATGCTTAACTTTCAGAATATAAACTTATGCTCTAAATAAAATTGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTAACTTTCAGAATATAAACTTATGCTCTAAATAAAATTGGCTA  600

seq1  TTGCACAAGGCCCAGTCTGCCTCATTTTTAATCCCCCTTCTCCCAAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAAGGCCCAGTCTGCCTCATTTTTAATCCCCCTTCTCCCAAGTCC  650

seq1  CTGCTACACTGCCTTAAGCCCTCGGGAACCCAGGCTCCCAGGACTCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACACTGCCTTAAGCCCTCGGGAACCCAGGCTCCCAGGACTCACAT  700

seq1  TTTCGGACAGAGTCTTCAAAGCCAGTTATGCCTTCCAGAAGGTCCATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGACAGAGTCTTCAAAGCCAGTTATGCCTTCCAGAAGGTCCATGTT  750

seq1  CTCATCCAGGGCTTGCTGTGGAAGAAAGGATGCCCCAGTATTAACACTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCAGGGCTTGCTGTGGAAGAAAGGATGCCCCAGTATTAACACTAG  800

seq1  CACCATCACTCAGCATTAACCAGTCAGTGCTGACGTTGTGGAGGCTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACTCAGCATTAACCAGTCAGTGCTGACGTTGTGGAGGCTGAGA  850

seq1  CAGGAGGGATCAAAAGTTCTGAGTCAGCAGGTGTGAGCAAT-CCGGGTAC  899
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  CAGGAGGGATCAAAAGTTCTGAGTCAGCA-GTGTGAGCAATCCCGGGTAC  899

seq1  AGGAGATCGTGCCTCTGCCTGCCTGCCTGCCTGCCCACCTGCCCGCCCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCGTGCCTCTGCCTGCCTGCCTGCCTGCCCACCTGCCCGCCCCT  949

seq1  GTCTCTGGTTTAAGACAAGGTTTCTCTGTGTAGCCCTAGCAGTCCTGGAA  999
      ||||||||||| |||| |||||||||||||||||||||||||| |||| |
seq2  GTCTCTGGTTT-AGAC-AGGTTTCTCTGTGTAGCCCTAGCAGT-CTGG-A  995

seq1  CTGGCCCTGAAAAACCAGGTTGGCCTTGAACTAAAAAAATCCACCTGCCT  1049
      || | |||| ||||||||  |||||||  ||| |||||||||||||||||
seq2  CT-GACCTG-AAAACCAG--TGGCCTTTGACT-AAAAAATCCACCTGCCT  1040

seq1  CTGCCTGGCTGGGAAGTCCA  1069
      ||| |||||||||  |||||
seq2  CTG-CTGGCTGGG-CGTCCA  1058

seq1: chr7_29950602_29950783
seq2: B6Ng01-278D21.g_73_254 (reverse)

seq1  TCCCCCCCCCCCAAAAAAACCCAACAAATAAACAAATGAACAATGGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCCAAAAAAACCCAACAAATAAACAAATGAACAATGGAGTC  50

seq1  AAAGATGACTCCAAATTTACAAGCCTGCAGCTTGAGCAGTAAGTAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGACTCCAAATTTACAAGCCTGCAGCTTGAGCAGTAAGTAGAAGA  100

seq1  TAGAATTATCAATTCATACAAGGGTGGTTTTGGTGCACGCCTTTAATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTATCAATTCATACAAGGGTGGTTTTGGTGCACGCCTTTAATCCC  150

seq1  AGCACTTGGGAGGTAGAGGGAAGTGGATCTCT  182
      ||||||||||||||||||||||||||||||||
seq2  AGCACTTGGGAGGTAGAGGGAAGTGGATCTCT  182