BAC Information

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BAC

Clone NameB6Ng01-278O03
Chromosome7 (Build37)
Map Location 115,078,105 - 115,210,658
singlet/doubletdoublet
Overlap geneLOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480
Upstream geneOlfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473
Downstream geneOlfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278O03.bB6Ng01-278O03.g
ACCGA079010GA079011
length1,1281,119
definitionB6Ng01-278O03.b B6Ng01-278O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,078,105 - 115,079,233)(115,209,537 - 115,210,658)
sequence
gaattcacttatttctcacaacatcataaatatgtagtaccactgttttt
ttccctctttgtgtgtatgtataaattgcctgagtaaagacggaatgtag
attgcctatatagttgtgaaggcaagaattgatgtttttgttatctaagt
tgttgttctctcaagatctgtagtctctacatttaattttacaatgaatc
tattagattgggtattataaattactctgtttatagacaagaaaagtgac
tcttggagaaacaggatagatttctacagagaagtgtggatttagtggtg
atcctctgcatcatgcacttactgcacactccagcacaacctgtttagtg
gtgtcagcactgctatcatatagagaatgtattgagagttatcaatctta
agttagtgttgagtgaacctttctaataaatgttatgctaatattatcta
cgttacatatatcagagagtaagaaataatctcaaaaagccccagataaa
ttatcatttttttttaggaaaccaggtctttataacatatttagaagatt
tggcttgagttttagccatatttatgtacacacttgaaaacagtctttga
aatgatataaatattaatacttgaagagtgttagaaggggcatttaaaaa
tttccatgttgttgttaatggctgtgctagagtctgccaatacaaatcag
tgaataaattagaacttataaaaactactagaactattatcttggaatga
acttcacattgttcctgtgaacaagatctactttaactaatctgatcatc
atcatgatactggaaagattaagagttttgttaggtcatggattctttat
aaaaaatactgagaaaattatgatattagaaaataagatttataattcaa
gtcttttttcttagtgtaataggattagaaacagaggaaatagagatatt
tataaacttccacagacagaatatatttagttgtctataccattaaagtc
atagtattttttattgagatttatactgaagactgaaagcttacagatta
agttaaatggaattggattattgttagttttgcattttaagatttttttt
tcctatattaaaattcctatgaagaaaa
gaattctatgaggtacatgctgaagcaccttatgatgaagtaatggtggg
ttttctgttttatatgctaattgtttaaaactccacaagttgtcagtcat
aaagccaaagacctgagttcacctgccttgtcactgacctttagaaagaa
aagatattttccccatttcagtagatctctattgctcactgaaatataaa
ctagcaacatgaagaacatatgattgaactatatcaaagaaacaaatttt
tctaatcataaatgaccatgaatcattgaattttataagctgaagttctt
tcatgaggtaccacacaacagcatgttcctgtacacatgtaactacctat
gttttgtcatttatataatgagaacaatatgcaagtggcaatcctggatt
ccattctaataccttcttatttttctttcctgacagagatggagcctgga
aactacacagttgtaacagaattcattcttttagggttaacagatgatat
tacagtcagtgtcattttatttgttatgtttctaatcgtctattctgtta
ctttaatgggtaacttgaacataattgtgctaatcagaaccagccctcag
cttcacacccccatgtaccttttccttagccatttggcctttctagacat
tgggtactccagctcagttacacccatcatgctgaggggctttctcagaa
agggaacatttatccctgtggctggctgtgtggctcaactctgtattgtg
gtggcatttgggacatctgaatctttcttgctagcttccatggcctatga
ccgctatgtggccatctgctcacctttgctctactcaacacagatgtcct
ccacagtctgcatcctcctagttggaacttcctacctaagtggatgggtg
aatgcttggatatttactggttgctccttaatctgtcattttgtgggcca
aataaaattaatcactttttctgtgactattcacactattgaagcttttc
ttgttctcatgacttttcttttgaagtcattccagcaattctctcggatc
catcatgtggtcactggtgtttatcattgcctctgtcttatgtctacatc
ctgtgtccatctgaagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115078105_115079233
seq2: B6Ng01-278O03.b_48_1175

seq1  GAATTCACTTATTTCTCACAACATCATAAATATGTAGTACCACTGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTATTTCTCACAACATCATAAATATGTAGTACCACTGTTTTT  50

seq1  TTCCCTCTTTGTGTGTATGTATAAATTGCCTGAGTAAAGACGGAATGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTTGTGTGTATGTATAAATTGCCTGAGTAAAGACGGAATGTAG  100

seq1  ATTGCCTATATAGTTGTGAAGGCAAGAATTGATGTTTTTGTTATCTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTATATAGTTGTGAAGGCAAGAATTGATGTTTTTGTTATCTAAGT  150

seq1  TGTTGTTCTCTCAAGATCTGTAGTCTCTACATTTAATTTTACAATGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCTCTCAAGATCTGTAGTCTCTACATTTAATTTTACAATGAATC  200

seq1  TATTAGATTGGGTATTATAAATTACTCTGTTTATAGACAAGAAAAGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATTGGGTATTATAAATTACTCTGTTTATAGACAAGAAAAGTGAC  250

seq1  TCTTGGAGAAACAGGATAGATTTCTACAGAGAAGTGTGGATTTAGTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAGAAACAGGATAGATTTCTACAGAGAAGTGTGGATTTAGTGGTG  300

seq1  ATCCTCTGCATCATGCACTTACTGCACACTCCAGCACAACCTGTTTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGCATCATGCACTTACTGCACACTCCAGCACAACCTGTTTAGTG  350

seq1  GTGTCAGCACTGCTATCATATAGAGAATGTATTGAGAGTTATCAATCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGCACTGCTATCATATAGAGAATGTATTGAGAGTTATCAATCTTA  400

seq1  AGTTAGTGTTGAGTGAACCTTTCTAATAAATGTTATGCTAATATTATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTGTTGAGTGAACCTTTCTAATAAATGTTATGCTAATATTATCTA  450

seq1  CGTTACATATATCAGAGAGTAAGAAATAATCTCAAAAAGCCCCAGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACATATATCAGAGAGTAAGAAATAATCTCAAAAAGCCCCAGATAAA  500

seq1  TTATCATTTTTTTTTAGGAAACCAGGTCTTTATAACATATTTAGAAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTTTTTTTTAGGAAACCAGGTCTTTATAACATATTTAGAAGATT  550

seq1  TGGCTTGAGTTTTAGCCATATTTATGTACACACTTGAAAACAGTCTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAGTTTTAGCCATATTTATGTACACACTTGAAAACAGTCTTTGA  600

seq1  AATGATATAAATATTAATACTTGAAGAGTGTTAGAAGGGGCATTTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATAAATATTAATACTTGAAGAGTGTTAGAAGGGGCATTTAAAAA  650

seq1  TTTCCATGTTGTTGTTAATGGCTGTGCTAGAGTCTGCCAATACAAATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTTGTTGTTAATGGCTGTGCTAGAGTCTGCCAATACAAATCAG  700

seq1  TGAATAAATTAGAACTTATAAAAACTACTAGAACTATTATCTTGGAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAATTAGAACTTATAAAAACTACTAGAACTATTATCTTGGAATGA  750

seq1  ACTTCACATTGTTCCTGTGAACAAGATCTACTTTAACTAATCTGATCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACATTGTTCCTGTGAACAAGATCTACTTTAACTAATCTGATCATC  800

seq1  ATCATGATACTGGAAAGATTAAGAGTTTTGTTAGGTCATGGATTCTTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATACTGGAAAGATTAAGAGTTTTGTTAGGTCATGGATTCTTTAT  850

seq1  AAAAAATACTGAGAAAATTATGATATTAGAAAATAAGATTTATAATTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATACTGAGAAAATTATGATATTAGAAAATAAGATTTATAATTCAA  900

seq1  GTCTTTTTTCTTAGTGTAATAGGATTAGAAACAAGAGGAAATAGAGATAT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTCTTTTTTCTTAGTGTAATAGGATTAGAAAC-AGAGGAAATAGAGATAT  949

seq1  TTATAAACTTCCACAAGACAGAATATATTTAGTTGTCTATACCATTAAAG  1000
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTATAAACTTCCAC-AGACAGAATATATTTAGTTGTCTATACCATTAAAG  998

seq1  TTCATAGTATTTTTATTGGAGATTTATACTGAAGACTGAAAGCTAACAGG  1050
       |||||||||||||  | |||||||||||||||||||||||||| |||| 
seq2  -TCATAGTATTTTTTATTGAGATTTATACTGAAGACTGAAAGCTTACAGA  1047

seq1  ATAAGTTAAATGGAAATGGGATTAT--GTAGTTTTGCATTTT-AGA--TT  1095
       |||||||||||| ||| |||||||   |||||||||||||| |||  ||
seq2  TTAAGTTAAATGG-AATTGGATTATTGTTAGTTTTGCATTTTAAGATTTT  1096

seq1  TTTTTCCTATATAAAAAATTTCCTATGAAGAAAA  1129
      |||||||||||| ||||  |||||||||||||||
seq2  TTTTTCCTATATTAAAA--TTCCTATGAAGAAAA  1128

seq1: chr7_115209537_115210658
seq2: B6Ng01-278O03.g_64_1182 (reverse)

seq1  CATCTTCAGGATTGACACAAGGATGTAGACATAAGACAGA-GCAATGATA  49
      |||||||| ||| ||||| ||||||||||||||||||||| |||||||||
seq2  CATCTTCA-GATGGACAC-AGGATGTAGACATAAGACAGAGGCAATGATA  48

seq1  AACA-CAGTGACCACAATGATGGATCCCGAAGAGATTGCTGGAATGACTT  98
      |||| |||||||||| |||||||||||   ||| ||||||||||||||||
seq2  AACACCAGTGACCAC-ATGATGGATCCGAGAGA-ATTGCTGGAATGACTT  96

seq1  CAAAAGAAAAGTCATGAGAACAAG-AAAGCTTCAATAGTGGTGAATAGTC  147
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  CAAAAGAAAAGTCATGAGAACAAGAAAAGCTTCAATAGT-GTGAATAGTC  145

seq1  ACAGAAAAAGTGATTAATTTTATTTGGCCCACAAAATGACAGATTTAAGG  197
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACAGAAAAAGTGATTAATTTTATTTGGCCCACAAAATGACAGA-TTAAGG  194

seq1  AGCAACCAGTAAATATCCAAGCATTCACCCATCCACCTAGGTAGGAAGTT  247
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGCAACCAGTAAATATCCAAGCATTCACCCATCCACTTAGGTAGGAAGTT  244

seq1  CCAACTAGGAGGATGCAGACTGTGGAGGACATCTGTGTTGAGTAGAGCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTAGGAGGATGCAGACTGTGGAGGACATCTGTGTTGAGTAGAGCAA  294

seq1  AGGTGAGCAGATGGCCACATAGCGGTCATAGGCCATGGAAGCTAGCAAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGCAGATGGCCACATAGCGGTCATAGGCCATGGAAGCTAGCAAGA  344

seq1  AAGATTCAGATGTCCCAAATGCCACCACAATACAGAGTTGAGCCACACAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCAGATGTCCCAAATGCCACCACAATACAGAGTTGAGCCACACAG  394

seq1  CCAGCCACAGGGATAAATGTTCCCTTTCTGAGAAAGCCCCTCAGCATGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACAGGGATAAATGTTCCCTTTCTGAGAAAGCCCCTCAGCATGAT  444

seq1  GGGTGTAACTGAGCTGGAGTACCCAATGTCTAGAAAGGCCAAATGGCTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTAACTGAGCTGGAGTACCCAATGTCTAGAAAGGCCAAATGGCTAA  494

seq1  GGAAAAGGTACATGGGGGTGTGAAGCTGAGGGCTGGTTCTGATTAGCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGTACATGGGGGTGTGAAGCTGAGGGCTGGTTCTGATTAGCACA  544

seq1  ATTATGTTCAAGTTACCCATTAAAGTAACAGAATAGACGATTAGAAACAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTTCAAGTTACCCATTAAAGTAACAGAATAGACGATTAGAAACAT  594

seq1  AACAAATAAAATGACACTGACTGTAATATCATCTGTTAACCCTAAAAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAAATGACACTGACTGTAATATCATCTGTTAACCCTAAAAGAA  644

seq1  TGAATTCTGTTACAACTGTGTAGTTTCCAGGCTCCATCTCTGTCAGGAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTGTTACAACTGTGTAGTTTCCAGGCTCCATCTCTGTCAGGAAA  694

seq1  GAAAAATAAGAAGGTATTAGAATGGAATCCAGGATTGCCACTTGCATATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAGAAGGTATTAGAATGGAATCCAGGATTGCCACTTGCATATT  744

seq1  GTTCTCATTATATAAATGACAAAACATAGGTAGTTACATGTGTACAGGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATTATATAAATGACAAAACATAGGTAGTTACATGTGTACAGGAA  794

seq1  CATGCTGTTGTGTGGTACCTCATGAAAGAACTTCAGCTTATAAAATTCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTTGTGTGGTACCTCATGAAAGAACTTCAGCTTATAAAATTCAA  844

seq1  TGATTCATGGTCATTTATGATTAGAAAAATTTGTTTCTTTGATATAGTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCATGGTCATTTATGATTAGAAAAATTTGTTTCTTTGATATAGTTC  894

seq1  AATCATATGTTCTTCATGTTGCTAGTTTATATTTCAGTGAGCAATAGAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATGTTCTTCATGTTGCTAGTTTATATTTCAGTGAGCAATAGAGA  944

seq1  TCTACTGAAATGGGGAAAATATCTTTTCTTTCTAAAGGTCAGTGACAAGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGAAATGGGGAAAATATCTTTTCTTTCTAAAGGTCAGTGACAAGG  994

seq1  CAGGTGAACTCAGGTCTTTGGCTTTATGACTGACAACTTGTGGAGTTTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAACTCAGGTCTTTGGCTTTATGACTGACAACTTGTGGAGTTTTA  1044

seq1  AACAATTAGCATATAAAACAGAAAACCCACCATTACTTCATCATAAGGTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTAGCATATAAAACAGAAAACCCACCATTACTTCATCATAAGGTG  1094

seq1  CTTCAGCATGTACCTCATAGAATTC  1122
      |||||||||||||||||||||||||
seq2  CTTCAGCATGTACCTCATAGAATTC  1119