BAC Information

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BAC

Clone NameB6Ng01-279A10
Chromosome7 (Build37)
Map Location 113,936,933 - 113,938,040
singlet/doubletsinglet
Overlap genenone
Upstream geneMrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699
Downstream geneOlfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279A10.bB6Ng01-279A10.g
ACCGA079115GA079116
length1,1601,100
definitionB6Ng01-279A10.b B6Ng01-279A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagatctgtacaccattttttaaatgggtttatttgtt
tttatggagttcaactcttgagttctttgtatatattggatattaccccg
tataggatttaggattcataatgatgttttcccaatctgttggctgccgt
tttgtcctactgacattgtcctttgccttacagaattttgcaattctatg
aggttcaatttgtccattcttgatcttagagcacaaggcattggtgttct
gttcaggaatttttcccctttgcccatatcttcgaggttcttccctactt
tctcctctataagtttcagtgtctctggttttatgtagatttcctagatt
cacgtagacttgagctatgttaaaggagataagtatggatcaattcacat
tcttatacatgataaatgctatttgagccttcaacatttgttgaaaatgc
tgtctcctttcttctgaatggttttagttttttgtcacagatcaagtgac
tacaggtgtgtgggttcatttaggtcttcaattctattccattgatctac
tgtctgtcactgaaacagtaccatgcaggttttatcacaattgctctgta
gtacagcttgagcttgggcatggtgattccaccagaggttcttttattgt
gaatagtttttgctattctaggttttttgttattccagatgaatttgcaa
attgccgtttccaactcggtgaagaattgagttggaattttgatgttttg
agctttactaaagtttctttagtgaatgtggatggccttgcatttggagc
atagttattcagaattgagagttcatcttggtagatttcacctttgagga
gtatgaagcgtccctcctcatcttttttgataactttaggttgaaagtcg
attttattgatattagaatggctacttcagcttgtgtctggaccatttgc
ttggaaaatgttttcagcttttactcaagtagtgtctgtcttcgtcatga
ttggggttctgttgcagaaaaatgctggtcctgttatgtacagtctgtag
tttattgttctttatggaattgagttccatgaataagagaattcaaggaa
gtcattgtgctcgtaattgactaagccatgggatctgtcatataggtgta
tcctcccttg
gaattcattaagaaaaagtagaaaaaagatcatagataggatgaaaatga
agatagacaagacaagatgaagatagagaagtggaatattgatgatgaga
acgctaaaacaggaagcggcaaataggggaaaaggaaatgaagcagacaa
tgggaggtcaacctaaaggaagggacaatgaaaaagacatatggaaatgt
actattttgcaaccaaaatttcctattcagccacagtttcttggtcatga
tcttaatgacacatgatgatttcaacttgtgattggacctttaatccaat
cagaaaatgttggttcctccgaagacatttttcaattattgcatgagtgg
gaataccttgccaggatgtttattgtagcctgtagggttcacacttacat
atgtttgatgacttaaattgttttttggagaaatttgtatggaagcattg
catctacataactcccactactacctactcccccaagcatgctgttttat
tttctaagtacttttcaagacatttctccattgtcctattactgccaatg
ataggctattgtcatctatatgtgtttatatcatgggtattttgtctctg
aaagcatttaagtgatttttattaatattgactctctacaactctagtat
tgaatagatttatttctattttccagcttaataaaaagaaaattgaactc
tttctttagctatcactcacagagccaagacatgagctctgcatatagaa
gctgcactaggttgccattggaaaatgtaaatatcccacaactagaacta
cctagagaagccatactgaattgaagcaaaataaaggaaagcaacattcc
ataaacactgagaagaggacatgatattccaggatagaaggatattcagt
tacattttgattttcatttagaactacataaaaactttgggaaagtccgg
tgaggtctggtatatgagtgtccttatctcatcatatgagaagctaagga
aactggatctacattcatgggaggaaaaactagagcctcagctcagtagt
gacagaacatcctcaggaaagcaggcagaaacacacccaagaggcctcat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113936933_113938040
seq2: B6Ng01-279A10.g_67_1166 (reverse)

seq1  ATGAGGCCTCTTGGGTGTGTTTTCTGGCTTGCCTTTCCTGAGG-TGTTCT  49
      ||||||||||||||||||| |||||| ||   ||||||||||| ||||||
seq2  ATGAGGCCTCTTGGGTGTG-TTTCTGCCT--GCTTTCCTGAGGATGTTCT  47

seq1  GTCACTAACTGAGCTTTGAGGCTCTAGGTTTTTCCTCCCATTGAATGTAG  99
      |||||| |||||||  |||||||||| ||||||||||||| |||||||| 
seq2  GTCACT-ACTGAGC--TGAGGCTCTA-GTTTTTCCTCCCA-TGAATGTA-  91

seq1  GATCCAGTTTCCTTAGCTTCTCATATGATGAGATTAAGGACACTCATATA  149
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GATCCAGTTTCCTTAGCTTCTCATATGATGAGA-TAAGGACACTCATATA  140

seq1  CCAAGACCTCACCGGACTTT-CCAAAGTTTTTATGTAGTTCTAAATGAAA  198
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CC-AGACCTCACCGGACTTTCCCAAAGTTTTTATGTAGTTCTAAATGAAA  189

seq1  ATCAAAATGTAACTGAATATCCTTCTATCCTGGAATATCATGTCCTCTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATGTAACTGAATATCCTTCTATCCTGGAATATCATGTCCTCTTC  239

seq1  TCAGTGTTTATGGAATGTTGCTTTCC-TTATTTTGCTTCAATTCAGTATG  297
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAGTGTTTATGGAATGTTGCTTTCCTTTATTTTGCTTCAATTCAGTATG  289

seq1  GCTTCTCTAGGTAGTTCTAGTTGTGGGATATTTACATTTTCCAATGGCAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTAGGTAGTTCTAGTTGTGGGATATTTACATTTTCCAATGGCAA  339

seq1  CCTAGTGCAGCTTCTATATGCAGAGCTCATGTCTTGGCTCTGTGAGTGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGCAGCTTCTATATGCAGAGCTCATGTCTTGGCTCTGTGAGTGAT  389

seq1  AGCTAAAGAAAGAGTTCAATTTTCTTTTTATTAAGCTGGAAAATAGAAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAGAAAGAGTTCAATTTTCTTTTTATTAAGCTGGAAAATAGAAAT  439

seq1  AAATCTATTCAATACTAGAGTTGTAGAGAGTCAATATTAATAAAAATCAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATTCAATACTAGAGTTGTAGAGAGTCAATATTAATAAAAATCAC  489

seq1  TTAAATGCTTTCAGAGACAAAATACCCATGATATAAACACATATAGATGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGCTTTCAGAGACAAAATACCCATGATATAAACACATATAGATGA  539

seq1  CAATAGCCTATCATTGGCAGTAATAGGACAATGGAGAAATGTCTTGAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCTATCATTGGCAGTAATAGGACAATGGAGAAATGTCTTGAAAA  589

seq1  GTACTTAGAAAATAAAACAGCATGCTTGGGGGAGTAGGTAGTAGTGGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTAGAAAATAAAACAGCATGCTTGGGGGAGTAGGTAGTAGTGGGAG  639

seq1  TTATGTAGATGCAATGCTTCCATACAAATTTCTCCAAAAAACAATTTAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGATGCAATGCTTCCATACAAATTTCTCCAAAAAACAATTTAAG  689

seq1  TCATCAAACATATGTAAGTGTGAACCCTACAGGCTACAATAAACATCCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAACATATGTAAGTGTGAACCCTACAGGCTACAATAAACATCCTG  739

seq1  GCAAGGTATTCCCACTCATGCAATAATTGAAAAATGTCTTCGGAGGAACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTATTCCCACTCATGCAATAATTGAAAAATGTCTTCGGAGGAACC  789

seq1  AACATTTTCTGATTGGATTAAAGGTCCAATCACAAGTTGAAATCATCATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTCTGATTGGATTAAAGGTCCAATCACAAGTTGAAATCATCATG  839

seq1  TGTCATTAAGATCATGACCAAGAAACTGTGGCTGAATAGGAAATTTTGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAAGATCATGACCAAGAAACTGTGGCTGAATAGGAAATTTTGGT  889

seq1  TGCAAAATAGTACATTTCCATATGTCTTTTTCATTGTCCCTTCCTTTAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATAGTACATTTCCATATGTCTTTTTCATTGTCCCTTCCTTTAGG  939

seq1  TTGACCTCCCATTGTCTGCTTCATTTCCTTTTCCCCTATTTGCCGCTTCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTCCCATTGTCTGCTTCATTTCCTTTTCCCCTATTTGCCGCTTCC  989

seq1  TGTTTTAGCGTTCTCATCATCAATATTCCACTTCTCTATCTTCATCTTGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGCGTTCTCATCATCAATATTCCACTTCTCTATCTTCATCTTGT  1039

seq1  CTTGTCTATCTTCATTTTCATCCTATCTATGATCTTTTTTCTACTTTTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTATCTTCATTTTCATCCTATCTATGATCTTTTTTCTACTTTTTC  1089

seq1  TTAATGAATTC  1108
      |||||||||||
seq2  TTAATGAATTC  1100