BAC Information

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BAC

Clone NameB6Ng01-279G02
Chromosome7 (Build37)
Map Location 77,800,892 - 77,937,885
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279G02.bB6Ng01-279G02.g
ACCGA079376GA079377
length1,0491,080
definitionB6Ng01-279G02.b B6Ng01-279G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,800,892 - 77,801,935)(77,936,787 - 77,937,885)
sequence
gaattcactctgtagaccaggctggccttgaactcagggagatccaccta
cctctgccttctgaggactaaaatcaaagcagtgcatcaccacttcagtc
ttatttaataaatttttaaacccttttattttaaaatttattatttatta
attaatttatttatttacttgacaatacagtatccgctcttcctctcctc
caagtacgcctcacacaagttctttgcccccccccccccattccaacttc
tggatgccacccccagctcccaatccctccacatcaagttgctgttggac
tagctgagactagacaaggcataacaggaatgtccatttaggggcgcagg
attcataggcaggcaggcaacaggatcagggacagcttctgctctagttg
ttgggggaccaagccactcatctgctacatatgtgcaggggcttagttcc
aactgggtcttgctctttggtgggtaattcagactctgggagccccaagg
gtccaggttagttggttctgttggtcttcctgtggagtccctatcttctc
cggtcctcagtcctcgcaacttttctgtaagactccctgtgttctatcta
atgtttgggtatgagtcactgcatctatttccattgactcctgggaggag
ccactcagaggacagttatactaggtttctgtttgcaagcatttataaat
tataagttaacacgaagctattctgagaacatatagattctaaaggttct
aacttttcagaaataatagagaaaaatggagacaggctagacttttaatg
tatatgaaaatcaaatataaaaccatccagagtctgccccacctgggggg
acggggatccatcccataatcaggcaccaaacacagacactattgcatta
tgccagcaagatttgctgaaaggacgctgatatagctgtctcctgtgagg
ctatgccagtgcctgacaaaatacagaaggtggatgcttcacagtcaggc
tattggatggaacacaggggcccccatgaggagctagagaaatttaccc

gaattccaagtggcccaaacgtatgcaaactacttgtgtgatgcgagaaa
caacagaaatcttgtgagctgaaggagagatacatcacttcattattaaa
aatctgcaagggcttcacatcttgagacactctcccaactgcatagtgga
tatgcaaggaagaaaaaaaaatctacaaggaaacttgaaaattactacta
ttctcaaggaagatgcaaatctaggccaaaaaggctccttattacagcca
gcccattggaacccttctaaaaattccacatcacatgttcccttaacaag
gagtaagggaattgcattaagctaaatttatttctgctctagtctcccaa
tgaagcactttattattttattttttttactaacaatctttggtatttat
tttacaaagtcatgaaaaatcaagtgaatgagacttgctgctaattgtga
aaacctttttctatactgttggagaagtcttagttcgataatttaacatg
atggcttcctctttcaaaagggtaagcacacacaaggataaatgcctcct
agaggtgaaggtcggaagactcccaagaagtcccatcagtagcacctggg
actctacaagaagaccttgctttatcatacagaaggacacattgttgaat
tctttctgtaatccaaactgcttgagtccgttcataggctctccacctac
taactctggggccctaagatagtgacaaggctctctaccctcatttttgc
catctgtaaaatgggagcagtaatctcaactcaagttaaactttgaagac
tagaggtctagagtttgtgtctaacaggtggaggccattacatgatcctt
tgaagctttccctcaaattgcagtagttttcagtcttctgagttgtacat
tcgtctgagttgaattcaagttcttactctctgggctacatcatcttgtt
ctaactgttcgcagatgagatttgggattcaaagttagccacagtaccca
aaggactctttgtagcagacggctcagttataaaaaaaaaactcctctgc
caaggtagtttaccaagcagattgtatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77800892_77801935
seq2: B6Ng01-279G02.b_43_1091

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGGGAGATCCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGGGAGATCCACCTA  50

seq1  CCTCTGCCTTCTGAGGACTAAAATCAAAGCAGTGCATCACCACTTCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTTCTGAGGACTAAAATCAAAGCAGTGCATCACCACTTCAGTC  100

seq1  TTATTTAATAAATTTTTAAACCCTTTTATTTTAAAATTTATTATTTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAATAAATTTTTAAACCCTTTTATTTTAAAATTTATTATTTATTA  150

seq1  ATTAATTTATTTATTTACTTGACAATACAGTATCCGCTCTTCCTCTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTATTTATTTACTTGACAATACAGTATCCGCTCTTCCTCTCCTC  200

seq1  CAAGTACGCCTCACACAAGTTCTTTGCCCCCCCCCCCCCATTCCAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACGCCTCACACAAGTTCTTTGCCCCCCCCCCCCCATTCCAACTTC  250

seq1  TGGATGCCACCCCCAGCTCCCAATCCCTCCACATCAAGTTGCTGTTGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCCACCCCCAGCTCCCAATCCCTCCACATCAAGTTGCTGTTGGAC  300

seq1  TAGCTGAGACTAGACAAGGCATAACAGGAATGTCCATTTAGGGGCGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGACTAGACAAGGCATAACAGGAATGTCCATTTAGGGGCGCAGG  350

seq1  ATTCATAGGCAGGCAGGCAACAGGATCAGGGACAGCTTCTGCTCTAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGGCAGGCAGGCAACAGGATCAGGGACAGCTTCTGCTCTAGTTG  400

seq1  TTGGGGGACCAAGCCACTCATCTGCTACATATGTGCAGGGGCTTAGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGACCAAGCCACTCATCTGCTACATATGTGCAGGGGCTTAGTTCC  450

seq1  AACTGGGTCTTGCTCTTTGGTGGGTAATTCAGACTCTGGGAGCCCCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGTCTTGCTCTTTGGTGGGTAATTCAGACTCTGGGAGCCCCAAGG  500

seq1  GTCCAGGTTAGTTGGTTCTGTTGGTCTTCCTGTGGAGTCCCTATCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGTTAGTTGGTTCTGTTGGTCTTCCTGTGGAGTCCCTATCTTCTC  550

seq1  CGGTCCTCAGTCCTCGCAACTTTTCTGTAAGACTCCCTGTGTTCTATCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCTCAGTCCTCGCAACTTTTCTGTAAGACTCCCTGTGTTCTATCTA  600

seq1  ATGTTTGGGTATGAGTCACTGCATCTATTTCCATTGACTCCTGGGAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGGGTATGAGTCACTGCATCTATTTCCATTGACTCCTGGGAGGAG  650

seq1  CCACTCAGAGGACAGTTATACTAGGTTTCTGTTTGCAAGCATTTATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGAGGACAGTTATACTAGGTTTCTGTTTGCAAGCATTTATAAAT  700

seq1  TATAAGTTAACACGAAGCTATTCTGAGAACATATAGATTCTAAAGGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTTAACACGAAGCTATTCTGAGAACATATAGATTCTAAAGGTTCT  750

seq1  AACTTTTCAGAAATAATAGAGAAAAATGGAGACAGGCTAGACTTTTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCAGAAATAATAGAGAAAAATGGAGACAGGCTAGACTTTTAATG  800

seq1  TATATGAAAATCAAATATAAAACCATCCAGAGTCTGCCCCACCT-GGGGG  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATATGAAAATCAAATATAAAACCATCCAGAGTCTGCCCCACCTGGGGGG  850

seq1  ACGGGGATCCATCCCATAATCAGGCACCAAACACAGACACTATTGCA-TA  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACGGGGATCCATCCCATAATCAGGCACCAAACACAGACACTATTGCATTA  900

seq1  TGCCAGCAAGATTTTGCTGAAAGGACGCTGATATAGCTGTCTCCTGTGAG  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCAAGA-TTTGCTGAAAGGACGCTGATATAGCTGTCTCCTGTGAG  949

seq1  GCTATGCCAGTGCCTGAC-AAATACAGAA-GTGGATGC-TCACAGTCA-G  994
      |||||||||||||||||| |||||||||| |||||||| ||||||||| |
seq2  GCTATGCCAGTGCCTGACAAAATACAGAAGGTGGATGCTTCACAGTCAGG  999

seq1  CTATTGGATGGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAA-TTACC  1043
      |||||||||||||||||||| |||| || ||||||||||||||| |||||
seq2  CTATTGGATGGAACACAGGGGCCCCCAT-GAGGAGCTAGAGAAATTTACC  1048

seq1  C  1044
      |
seq2  C  1049


seq1: chr7_77936787_77937885
seq2: B6Ng01-279G02.g_65_1144 (reverse)

seq1  ATCATACAATCTTGCCTGGGTAAAACTACCCTGGGCAGGAAGGGAGTTTT  50
      ||||||||||| ||| |||   |||||| ||| |||||    ||||||||
seq2  ATCATACAATC-TGCTTGG--TAAACTA-CCTTGGCAG---AGGAGTTTT  43

seq1  TTTTTTTAATAACTGGAGCCAATTTCTGCTACAAAGAAGTCCCTTTGGGT  100
      ||||||  |||||| |||||    |||||||||||| ||| |||||||||
seq2  TTTTTT--ATAACT-GAGCC---GTCTGCTACAAAG-AGT-CCTTTGGGT  85

seq1  ACTGTGGCTTAACTTTGAATCCAAATTCCTCATCTGCGAACAGTTAGAAC  150
      |||||||| ||||||||||||| || | ||||||||||||||||||||||
seq2  ACTGTGGC-TAACTTTGAATCCCAAAT-CTCATCTGCGAACAGTTAGAAC  133

seq1  AAGATGATGTAGCCCAGGAGAGTAAGAACTTGAATTCAACTCAGACGAAT  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGATGATGTAGCCCA-GAGAGTAAGAACTTGAATTCAACTCAGACGAAT  182

seq1  GTACAACTCAGAAGACTGAAAACTACTGCAATTTTGAGGGAAAGCTTCAA  250
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTACAACTCAGAAGACTGAAAACTACTGCAA-TTTGAGGGAAAGCTTCAA  231

seq1  AGGATCATGTAATGGCCTCCACCTGTTAGACACAAACTCTAGACCTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCATGTAATGGCCTCCACCTGTTAGACACAAACTCTAGACCTCTAG  281

seq1  TCTTCAAAGTTTAACTTGAGTTGAGATTACTGCTCCCATTTTACAGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAGTTTAACTTGAGTTGAGATTACTGCTCCCATTTTACAGATGG  331

seq1  CAAAAATGAGGGTAGAGAGCCTTGTCACTATCTTAGGGCCCCAGAGTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAGGGTAGAGAGCCTTGTCACTATCTTAGGGCCCCAGAGTTAG  381

seq1  TAGGTGGAGAGCCTATGAACGGACTCAAGCAGTTTGGATTACAGAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGAGAGCCTATGAACGGACTCAAGCAGTTTGGATTACAGAAAGAA  431

seq1  TTCAACAATGTGTCCTTCTGTATGATAAAGCAAGGTCTTCTTGTAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAATGTGTCCTTCTGTATGATAAAGCAAGGTCTTCTTGTAGAGTC  481

seq1  CCAGGTGCTACTGATGGGACTTCTTGGGAGTCTTCCGACCTTCACCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGCTACTGATGGGACTTCTTGGGAGTCTTCCGACCTTCACCTCTA  531

seq1  GGAGGCATTTATCCTTGTGTGTGCTTACCCTTTTGAAAGAGGAAGCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCATTTATCCTTGTGTGTGCTTACCCTTTTGAAAGAGGAAGCCATC  581

seq1  ATGTTAAATTATCGAACTAAGACTTCTCCAACAGTATAGAAAAAGGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAATTATCGAACTAAGACTTCTCCAACAGTATAGAAAAAGGTTTT  631

seq1  CACAATTAGCAGCAAGTCTCATTCACTTGATTTTTCATGACTTTGTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTAGCAGCAAGTCTCATTCACTTGATTTTTCATGACTTTGTAAAA  681

seq1  TAAATACCAAAGATTGTTAGTAAAAAAAATAAAATAATAAAGTGCTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCAAAGATTGTTAGTAAAAAAAATAAAATAATAAAGTGCTTCAT  731

seq1  TGGGAGACTAGAGCAGAAATAAATTTAGCTTAATGCAATTCCCTTACTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGACTAGAGCAGAAATAAATTTAGCTTAATGCAATTCCCTTACTCC  781

seq1  TTGTTAAGGGAACATGTGATGTGGAATTTTTAGAAGGGTTCCAATGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGGGAACATGTGATGTGGAATTTTTAGAAGGGTTCCAATGGGCT  831

seq1  GGCTGTAATAAGGAGCCTTTTTGGCCTAGATTTGCATCTTCCTTGAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAATAAGGAGCCTTTTTGGCCTAGATTTGCATCTTCCTTGAGAAT  881

seq1  AGTAGTAATTTTCAAGTTTCCTTGTAGATTTTTTTTTCTTCCTTGCATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAATTTTCAAGTTTCCTTGTAGATTTTTTTTTCTTCCTTGCATAT  931

seq1  CCACTATGCAGTTGGGAGAGTGTCTCAAGATGTGAAGCCCTTGCAGATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGCAGTTGGGAGAGTGTCTCAAGATGTGAAGCCCTTGCAGATTT  981

seq1  TTAATAATGAAGTGATGTATCTCTCCTTCAGCTCACAAGATTTCTGTTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATGAAGTGATGTATCTCTCCTTCAGCTCACAAGATTTCTGTTGT  1031

seq1  TTCTCGCATCACACAAGTAGTTTGCATACGTTTGGGCCACTTGGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGCATCACACAAGTAGTTTGCATACGTTTGGGCCACTTGGAATTC  1080


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