BAC Information

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BAC

Clone NameB6Ng01-280H23
Chromosome7 (Build37)
Map Location 68,142,094 - 68,143,286
singlet/doubletsinglet
Overlap genenone
Upstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229
Downstream geneLOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280H23.bB6Ng01-280H23.g
ACCGA080208GA080209
length1,1921,183
definitionB6Ng01-280H23.b B6Ng01-280H23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctctcttgacttttgggaatttcatctaaggtctcttccattg
agtgttgagattctttcccgtcctgagtctctggtacattctagagtgtc
cccacaacttccacctccagagcatgtatattttcattcattctgttggc
ccttgtgcatcacacctgctcctgcctgcccctgcccaatactagataat
gttcccctcttcccctgcccatcccatttctctctccaaccacacccaaa
tccctccttccctctgtcctctggttttgtctgcctccctagtgggattg
aaacatcaacatttaggccctaaaattcctcttctagacacagtccattg
tccagtgctttggcactcttgccaaattggggaaattatttgtaaaactt
atatactagctggaattctggaaagcttccatccactcattaaatgacag
gaatgatcaggagaccagcacttgagtatccatattttactacactttct
gtgcaattgagaattaaccaaaattggcttttggagagtctagtgtattc
aggccaaagagctaaaaaacttgttgactatatcagaggagaaaacagag
acaccatactttctatgtgaaaatttttctggtgcccccttttagtcaaa
gcatgcacaacagagtaaagagctaatcactaatgttttctaatttgtca
cagtaaatttcttgtatttatagtgagaaccttgatagtagagagtttaa
ttagaggaatagccatcgattttatttctatttaggaaattaataataat
aataataataataataataataataataataataatagcaattttcaaga
tgaggtccatgcaacctcacttccccacacacccttccaggactcccctt
tccctggagcctcaagtctctagagttaggggcctctttctcacattgcg
gccagaccaggcagtcctctgttgtatatgtgtcagggcctcagagcagc
taatgtatgctacgtggtttggtgactcagtgtctcagagatctcatggc
caggtttgtgagactacttgcctttcctatgttggtcccctttgtgaaga
cctgtgacaatacagtagaattctatagatcagaaggccttccataattc
aaagacctacttgaagtgagacaatacatctaccttattttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctta
gaaaattggacatattactaccggaggatcccgcaaaacctctcctgggc
atatatccagatgtcccaactggtaataaggacacataatccactatgtt
catagcagccttatttataacagccagaagctgaaaagaacccagatgcc
cctcaacagaagactggatacagaaaatgtacatttacacaatggagtac
tattcagctattaaaaggaatgaatttatgaaattcctaggcaaatagat
ggacctggagggcatcatcctcagcgaggtaacccaatcacaaaagaact
catacaatatgtactcactgataagtggatattagcccagaaattaagaa
tacccaagatataagatacaatttgctaaacgcatgaaactcaagaagaa
cagagaccaaagtgtggaaactttgccccttcttagaattgggaagaaaa
cacccatgaaagtagttacagggagaaagtttggatatgagacgaaagaa
tggaccatctagagactgccatatccagggatccatcccacaatcagctt
ccaaatgctgacacaattgcatacactaacaatattttgctgaaaggacc
cagatatagctgtctcttgtgaaactaggccggggcctagcaaacacaga
agtggatgctcacagtcagctattggatggatcacagggccccaatggag
gagctagaaaaagtgctcaatgagctagggtatctgcaccctaataggtg
gacacatatgaactaaccagtacccccggagccacatgtctctagctaca
tatggtatcagaaagatgtctagtcagtcatcactagaaagagaggtcat
gtcatgttactttatattgcctcatacaaggaacgcagccagaagtagga
ttagttttggtggggagcagatctgcactccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68142094_68143286
seq2: B6Ng01-280H23.b_47_1238 (reverse)

seq1  CAAAATTAAAGTAGATGTATGTCCTCACTTTTAATTTAGTCTTTG-ATTA  49
      ||||| ||| ||||||||||   ||||| || || |  ||||||| ||||
seq2  CAAAA-TAAGGTAGATGTATTGTCTCAC-TTCAAGTAGGTCTTTGAATTA  48

seq1  TGGGAAGGCTTTCTGATCTATAGA--TCTACTTGTATTGTCACAGGGTCT  97
      | ||||||| ||||||||||||||  ||||| |||||||||||| |||||
seq2  T-GGAAGGCCTTCTGATCTATAGAATTCTAC-TGTATTGTCACA-GGTCT  95

seq1  TCCACAAGGGGACC-ACATAGG-AAGGCCAGTAGTCTCAACAAACCTGGG  145
      ||   ||||||||| ||||||| ||||| ||||||||| |||||||| ||
seq2  TCACAAAGGGGACCAACATAGGAAAGGCAAGTAGTCTC-ACAAACCT-GG  143

seq1  CCATGAGATCTCTGAGACACTGAGTCACC-AACCACGTAGCATACATTAG  194
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCATGAGATCTCTGAGACACTGAGTCACCAAACCACGTAGCATACATTAG  193

seq1  CTGCTCTGAGGCCCCTGACACATATACAACAGAGGACTGCCTGGTCTGGC  244
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGAGG-CCCTGACACATATACAACAGAGGACTGCCTGGTCTGGC  242

seq1  CGCAATGTGAG-AAGAGGCCCCTAACTCTAGAGACTTGAGGCTCCAGGGA  293
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CGCAATGTGAGAAAGAGGCCCCTAACTCTAGAGACTTGAGGCTCCAGGGA  292

seq1  AAGGGGAGTCCTGGAAGGGTGTGTGGGGAAGTGAGGTTGCATGGACCTCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAGTCCTGGAAGGGTGTGTGGGGAAGTGAGGTTGCATGGACCTCA  342

seq1  TCTTGAAAATTGCTATTATTATTATTATTATTATTATTATTATTATTATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAATTGCTATTATTATTATTATTATTATTATTATTATTATTATT  392

seq1  ATTATTATTAATTTCCTAAATAGAAATAAAATCGATGGCTATTCCTCTAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTAATTTCCTAAATAGAAATAAAATCGATGGCTATTCCTCTAA  442

seq1  TTAAACTCTCTACTATCAAGGTTCTCACTATAAATACAAGAAATTTACTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCTCTACTATCAAGGTTCTCACTATAAATACAAGAAATTTACTG  492

seq1  TGACAAATTAGAAAACATTAGTGATTAGCTCTTTACTCTGTTGTGCATGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATTAGAAAACATTAGTGATTAGCTCTTTACTCTGTTGTGCATGC  542

seq1  TTTGACTAAAAGGGGGCACCAGAAAAATTTTCACATAGAAAGTATGGTGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTAAAAGGGGGCACCAGAAAAATTTTCACATAGAAAGTATGGTGT  592

seq1  CTCTGTTTTCTCCTCTGATATAGTCAACAAGTTTTTTAGCTCTTTGGCCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTCTCCTCTGATATAGTCAACAAGTTTTTTAGCTCTTTGGCCT  642

seq1  GAATACACTAGACTCTCCAAAAGCCAATTTTGGTTAATTCTCAATTGCAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACACTAGACTCTCCAAAAGCCAATTTTGGTTAATTCTCAATTGCAC  692

seq1  AGAAAGTGTAGTAAAATATGGATACTCAAGTGCTGGTCTCCTGATCATTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGTAGTAAAATATGGATACTCAAGTGCTGGTCTCCTGATCATTC  742

seq1  CTGTCATTTAATGAGTGGATGGAAGCTTTCCAGAATTCCAGCTAGTATAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTTAATGAGTGGATGGAAGCTTTCCAGAATTCCAGCTAGTATAT  792

seq1  AAGTTTTACAAATAATTTCCCCAATTTGGCAAGAGTGCCAAAGCACTGGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTACAAATAATTTCCCCAATTTGGCAAGAGTGCCAAAGCACTGGA  842

seq1  CAATGGACTGTGTCTAGAAGAGGAATTTTAGGGCCTAAATGTTGATGTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTGTGTCTAGAAGAGGAATTTTAGGGCCTAAATGTTGATGTTT  892

seq1  CAATCCCACTAGGGAGGCAGACAAAACCAGAGGACAGAGGGAAGGAGGGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCACTAGGGAGGCAGACAAAACCAGAGGACAGAGGGAAGGAGGGA  942

seq1  TTTGGGTGTGGTTGGAGAGAGAAATGGGATGGGCAGGGGAAGAGGGGAAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGTGGTTGGAGAGAGAAATGGGATGGGCAGGGGAAGAGGGGAAC  992

seq1  ATTATCTAGTATTGGGCAGGGGCAGGCAGGAGCAGGTGTGATGCACAAGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTAGTATTGGGCAGGGGCAGGCAGGAGCAGGTGTGATGCACAAGG  1042

seq1  GCCAACAGAATGAATGAAAATATACATGCTCTGGAGGTGGAAGTTGTGGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACAGAATGAATGAAAATATACATGCTCTGGAGGTGGAAGTTGTGGG  1092

seq1  GACACTCTAGAATGTACCAGAGACTCAGGACGGGAAAGAATCTCAACACT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCTAGAATGTACCAGAGACTCAGGACGGGAAAGAATCTCAACACT  1142

seq1  CAATGGAAGAGACCTTAGATGAAATTCCCAAAAGTCAAGAGAGGGAATTC  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAAGAGACCTTAGATGAAATTCCCAAAAGTCAAGAGAGGGAATTC  1192