BAC Information

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BAC

Clone NameB6Ng01-280P14
Chromosome7 (Build37)
Map Location 85,155,468 - 85,156,280
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280P14.bB6Ng01-280P14.g
ACCGA080571GA080572
length1,162818
definitionB6Ng01-280P14.b B6Ng01-280P14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctcagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagcctgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagaagaaagtacccaaggagctaaagggaacttcaccctt
ataggtggaacaacattattgactaaccagtaccctgagctcttgactct
agctgcatatgtatcaaaagatgactagtcgcatcactggaagagagtca
tgaacgcagactttggttgccctgtacaggtacgccagccaagggggaat
gtgttgtattaa
gaattcaagatacactgtagagtttttttcccccattggaatgaaagaat
cgcccaatactatgtacaaacagctctcagttttccttcatatacagatg
tattaatttacccttggttttgatatttttttacaatttatcatataaca
atgatccgagattaatgcagtatgtttgcattctttatttcactttcctc
atgtgctaccaggagagtggtttcaactggaaacttagttagctttcagg
gctgaaacacagtgggcaagaggacggagtgtttaagacaagataagtga
ccacaatgcttactgttcttaatgagattttatatttatttatttatttg
tttatttatcttagtaaatgctgacaatactgttgcatgcctttggttat
tcacctaagttctacaccagtcacttgacccctccccctccccatgccat
tgcctcactgaatatatgagaggagacattgcagagagcagcaccccaca
attcttactaacttccacaactgtttgagtatttttgtgacaggaatatc
atagcactctaaagacaccatagggtcttgttgtgggggggaagggggcg
gggatcatatgtgcaaatataatagaacagtgctgaatatgagtcatcct
ttctactcaaattgttgctcaagaacaatgagcatggcctggaaatacta
aggaatgcagtgtttcaggtcccgatatagacccattggtctttaatatt
ttaacaaagatccccattttattcattttatgtctaaaacttcttgttaa
ataaaatgggtcccttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_85155468_85156280
seq2: B6Ng01-280P14.g_70_887 (reverse)

seq1  CCAAGGTA-CCATTTTATCTAACAAGAAGTTTAGGACAT-ATATGAATAA  48
      |||||| | ||||||||| |||||||||||||  ||||| | ||||||||
seq2  CCAAGGGACCCATTTTATTTAACAAGAAGTTTTAGACATAAAATGAATAA  50

seq1  ACTGGGGATC-TTGTTAAAATATTAAAGACCA--TGGTCTATATCGGGAC  95
      | |||||||| |||||||||||||||||||||   |||||||||||||||
seq2  AATGGGGATCTTTGTTAAAATATTAAAGACCAATGGGTCTATATCGGGAC  100

seq1  CTGAAACACTGCATTCCTTAGTATTTCCAGGCCATGCTCATTGTTCTTGA  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACACTGCATTCCTTAGTATTTCCAGGCCATGCTCATTGTTCTTGA  150

seq1  GCAACAATTTGAGTAGAAAGGATGACTCATATTCAGCACTGTTCTATTCT  195
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCAACAATTTGAGTAGAAAGGATGACTCATATTCAGCACTGTTCTATTAT  200

seq1  ATTTGCACATATGATCCCCGCCCCCTTCCCCCCCACAACAAGACCCTATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCACATATGATCCCCGCCCCCTTCCCCCCCACAACAAGACCCTATG  250

seq1  GTGTCTTTAGAGTGCTATGATATTCCTGTCACAAAAATACTCAAACAGTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTAGAGTGCTATGATATTCCTGTCACAAAAATACTCAAACAGTT  300

seq1  GTGGAAGTTAGTAAGAATTGTGGGGTGCTGCTCTCTGCAATGTCTCCTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTTAGTAAGAATTGTGGGGTGCTGCTCTCTGCAATGTCTCCTCT  350

seq1  CATATATTCAGTGAGGCAATGGCATGGGGAGGGGGAGGGGTCAAGTGACT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTCAGTGAGGCAATGGCATGGGGAGGGGGAGGGGTCAAGTGACT  400

seq1  GGTGTAGAACTTAGGTGAATAACCAAAGGCATGCAACAGTATTGTCAGCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGAACTTAGGTGAATAACCAAAGGCATGCAACAGTATTGTCAGCA  450

seq1  TTTACTAAGATAAATAAACAAATAAATAAATAAATATAAAATCTCATTAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAAGATAAATAAACAAATAAATAAATAAATATAAAATCTCATTAA  500

seq1  GAACAGTAAGCATTGTGGTCACTTATCTTGTCTTAAACACTCCGTCCTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTAAGCATTGTGGTCACTTATCTTGTCTTAAACACTCCGTCCTCT  550

seq1  TGCCCACTGTGTTTCAGCCCTGAAAGCTAACTAAGTTTCCAGTTGAAACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACTGTGTTTCAGCCCTGAAAGCTAACTAAGTTTCCAGTTGAAACC  600

seq1  ACTCTCCTGGTAGCACATGAGGAAAGTGAAATAAAGAATGCAAACATACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCTGGTAGCACATGAGGAAAGTGAAATAAAGAATGCAAACATACT  650

seq1  GCATTAATCTCGGATCATTGTTATATGATAAATTGTAAAAAAATATCAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAATCTCGGATCATTGTTATATGATAAATTGTAAAAAAATATCAAA  700

seq1  ACCAAGGGTAAATTAATACATCTGTATATGAAGGAAAACTGAGAGCTGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGGTAAATTAATACATCTGTATATGAAGGAAAACTGAGAGCTGTT  750

seq1  TGTACATAGTATTGGGCGATTCTTTCATTCCAATGGGGGAAAAAAACTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATAGTATTGGGCGATTCTTTCATTCCAATGGGGGAAAAAAACTCT  800

seq1  ACAGTGTATCTTGAATTC  813
      ||||||||||||||||||
seq2  ACAGTGTATCTTGAATTC  818