BAC Information

Click to search

BAC

Clone NameB6Ng01-281A22
Chromosome7 (Build37)
Map Location 25,013,103 - 25,013,645
singlet/doubletsinglet
Overlap geneZfp109
Upstream geneLOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111
Downstream geneZfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281A22.bB6Ng01-281A22.g
ACCGA080631GA080632
length358916
definitionB6Ng01-281A22.b B6Ng01-281A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttacacaaatgaatggaactagaaaatatcatcctgagtgaggtaaccca
atcacaaaagaacacacatggtatgtactctctgacaagtgactattagg
gaaaacgctcagaatacctactatacagctcacagaccatatgaaactaa
agaagaaagaagaccaaagtgtggatgcttcagtcctacttagaagggga
aacaaaataatcgcaggaggcagaggaagggaggaacctgggatggagag
gaaggggaggaatattggacacaggatcaagtgtgggaggaaacagggga
gaggtaccgagggtcaggaaatttaaaggagaggtgtagagcagtggggg
atgggagt
gaattcacacaggagagaagccatataagtgtggagactgtggcagacgc
ttcaggtttagctcaaacctgcacatccaccagcgagtccacactgggga
gaaaccgtacaaatgccacgtgtgtgggaagtgtttcagattcagatttt
acagccatcagcgggtccacacaggagagaagccatataagtgtgacgag
tgcgggaagggtttcacttcagcctcaaacgtcaaagtccaccagcgggt
ccacacgggagtgaagccgttttgctgcaatgtctgtgggaaatgcttca
gtcggagctttcatcttcacactcaccagagagtgcacacgggggagaag
ctctacaaatgtgacgcgtgtgggaaagccttcagccagagatccagtct
ccaagtccatcggctaattcacacaggagagaagccatataagtgtgaag
agtgtgggaagggtttcacttcagcctcaagcttccaaggacaccagcgg
gtccatacaggagagaaaccatttcattgcgatgtgtgtgggaaagactt
tagccggagctcatatcttcagattcaccagagaatgcacacgggagaga
agccctacaaatgcgacagctgtgggaaagccttcagccagagggcccat
ctccaagtccaccagagaactcacaccgggggagaagccgttcaagtgtg
aggagtgtgggaaggaattcaggcagcgttcggggctgagttctcaccag
atagtccacaaggaagagaaaccctacacgtgttgggagtgtgggaaggg
tttcagtcagcccttcactcctccaaagacaccggcgggtcccccactgg
gggaaagggccctatcatctgcggcacctgcttgcaaaggcttcagccag
agatccgcatctcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25013103_25013645
seq2: B6Ng01-281A22.g_434_984 (reverse)

seq1  GACGAGATGC-GATCTCTGGCTGAAGCCTTTGC-AGCAGGTGCCGCAGAT  48
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  GACGAGATGCGGATCTCTGGCTGAAGCCTTTGCAAGCAGGTGCCGCAGAT  50

seq1  G-TAGGGCC--TTTCCCCAGT-GTGGACCCGCCGGTGTCTTTCGAAGAGT  94
      | |||||||  || ||||||| | |||||||||||||||||| || ||||
seq2  GATAGGGCCCTTTCCCCCAGTGGGGGACCCGCCGGTGTCTTTGGAGGAGT  100

seq1  G-AGGGCTGACTGAAACCCTTCCCACACTCCCAACACGTGTAGGGTTTCT  143
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCTGACTGAAACCCTTCCCACACTCCCAACACGTGTAGGGTTTCT  150

seq1  CTTCCTTGTGGACTATCTGGTGAGAACTCAGCCCCGAACGCTGCCTGAAT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGTGGACTATCTGGTGAGAACTCAGCCCCGAACGCTGCCTGAAT  200

seq1  TCCTTCCCACACTCCTCACACTTGAACGGCTTCT-CCCCGGTGTGAGTTC  242
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCTTCCCACACTCCTCACACTTGAACGGCTTCTCCCCCGGTGTGAGTTC  250

seq1  TCTGGTGGACTTGGAGATGGGCCCTCTGGCTGAAGGCTTTCCCACAGCTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGGACTTGGAGATGGGCCCTCTGGCTGAAGGCTTTCCCACAGCTG  300

seq1  TCGCATTTGTAGGGCTTCTCTCCCGTGTGCATTCTCTGGTGAATCTGAAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATTTGTAGGGCTTCTCTCCCGTGTGCATTCTCTGGTGAATCTGAAG  350

seq1  ATATGAGCTCCGGCTAAAGTCTTTCCCACACACATCGCAATGAAATGGTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGCTCCGGCTAAAGTCTTTCCCACACACATCGCAATGAAATGGTT  400

seq1  TCTCTCCTGTATGGACCCGCTGGTGTCCTTGGAAGCTTGAGGCTGAAGTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTGTATGGACCCGCTGGTGTCCTTGGAAGCTTGAGGCTGAAGTG  450

seq1  AAACCCTTCCCACACTCTTCACACTTATATGGCTTCTCTCCTGTGTGAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTCCCACACTCTTCACACTTATATGGCTTCTCTCCTGTGTGAAT  500

seq1  TAGCCGATGGACTTGGAGACTGGATCTCTGGCTGAAGGCTTTCCCACACG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGATGGACTTGGAGACTGGATCTCTGGCTGAAGGCTTTCCCACACG  550

seq1  C  543
      |
seq2  C  551