BAC Information

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BAC

Clone NameB6Ng01-281A23
Chromosome7 (Build37)
Map Location 134,746,072 - 134,746,465
singlet/doubletsinglet
Overlap geneRnf40
Upstream geneNupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166
Downstream gene1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281A23.bB6Ng01-281A23.g
ACCGA080633GA080634
length390297
definitionB6Ng01-281A23.b B6Ng01-281A23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ccttctaggggtaaggatgtatctgtcttctcagtagaaacaggttttgg
tcagcttccaaggttacagtaggatgctgtgtacctgggagtccccgagg
ctgcagatctgacattcaggaaaagatggcactcagcttgggtgacccca
cctctcctgcacgcaccagtagccccaaaccatctaggcacataggggct
gggctcatggagtctgaaagggaggttggggccattgcccctgggggagt
ggggagctggggcacagcccctcgggtgttcaaagtcccctgagtttcag
gttcagctgatgtacacacggtggaagttcgtgggcaccaaaggctgcgt
tgcacttgggacatttccttctggcgggcctcatagcggc
cttataacctaatgggacaaggaattgtcgaacgtgtatatcacactctg
aaaaattggcttttcaaaacaaaaaaagggggaattgtactccccaaggt
cgccaaaagcacatcttgttctcttacttttttgcaaactgatggtaaag
gttagtctgcagtagattgccactggcatccagtcgcttccagctcatat
gccatggttaaatggtgagaccgcctaactaatacgtggaatggtccaga
atccgttttaatatgggggagaggttctgtttgtgttttgtggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134746072_134746465
seq2: B6Ng01-281A23.b_46_441 (reverse)

seq1  GCCGCTATGAGGCCCGCCAG-AGGAAATGTCCCAAGTGCAACGCAGCCTT  49
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCCGCTATGAGGCCCGCCAGAAGGAAATGTCCCAAGTGCAACGCAGCCTT  50

seq1  TGGTGCCCACG-ACTTCCACCGTGTGTACATCAGCTGAACCTGAAACTCA  98
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCCACGAACTTCCACCGTGTGTACATCAGCTGAACCTGAAACTCA  100

seq1  GGGGACTTTGAACACCCGAGGGGCTGTGCCCCAGCTCCCCACTCCCCCAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTTTGAACACCCGAGGGGCTGTGCCCCAGCTCCCCACTCCCCCAG  150

seq1  GGGCAATGGCCCCAACCTCCCTTTCAGACTCCATGAGCCCAGCCCCTATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGGCCCCAACCTCCCTTTCAGACTCCATGAGCCCAGCCCCTATG  200

seq1  TGCCTAGATGGTTTGGGGCTACTGGTGCGTGCAGGAGAGGTGGGGTCACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGATGGTTTGGGGCTACTGGTGCGTGCAGGAGAGGTGGGGTCACC  250

seq1  CAAGCTGAGTGCCATCTTTTCCTGAATGTCAGATCTGCAGCCTCGGGGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGAGTGCCATCTTTTCCTGAATGTCAGATCTGCAGCCTCGGGGAC  300

seq1  TCCCAGGTACACAGCATCCTACTGTAACCTTGGAAGCTGACCAAAACCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGTACACAGCATCCTACTGTAACCTTGGAAGCTGACCAAAACCTG  350

seq1  TTTCTACTGAGAAGACAGATACATCCTTACCCCTAGAAGGGAATTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTGAGAAGACAGATACATCCTTACCCCTAGAAGGGAATTC  396