BAC Information

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BAC

Clone NameB6Ng01-281G11
Chromosome7 (Build37)
Map Location 116,894,051 - 117,088,579
singlet/doubletdoublet
Overlap geneTmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1
Upstream geneOlfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3
Downstream geneTmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281G11.bB6Ng01-281G11.g
ACCGA080891GA080892
length751958
definitionB6Ng01-281G11.b B6Ng01-281G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,087,829 - 117,088,579)(116,894,051 - 116,895,007)
sequence
gaattcctaggatttcagatgtatgccagagaacctggccgggctacata
ttttgcctttagaaacagaaaatttgggagtggggcttagaaacctatat
tttatcaaactaaccaatccctgatgtatatactatactaattatgagag
cgtgtcccattcccttttcagtgatcgggattgaccccaggacattgtgc
atgctgagtaagcactctgccacagttttggcaacagtcgggaatgaaag
ctccatatttacttagccacttgttcttcagggaggctgggactgaggaa
ggaacggcagtgttgggctttggggctggttactcctgcttcacttgcag
ttctgaggctgagaatggcaaactagtcagaactagtttgtaggattgcg
ggagggagaaagtaaatccaatgcacatggaattataggggcaagtgagg
ctgtgctaagggagtgctatagaagccttaccttttttcctttattattg
aaattagtgagtcattcagcaccatctcacttcctgccatcctcctttca
gcctcttctgtgaatcttagctcatcagattctctgtcaacaccagagct
ggagagagaatgcaaggtgcactgtgaaacaaaccagaaaagaagcagac
aggaggatctgtgtgctagagatcagcctgtgtacgcagcagctccagga
ctgtcagagctatacagtgagacctgccttggggtaggggtaggggaagt
c
gaattcttctaatttcttcttttctaactttttccttttgggagaaaggc
actgggcatggataaaaggggctgagtgagctataaacaggatgaagatt
gaggggcactcagccagtgctagaagggaagtcaaaagggaaagtagttt
gaatcttcccattgtcccccaggaaacttgtctggcaatccatggttgac
aagaaaagcaactcctagcaatacgagtttcaggaggcaaagcaagcagg
cattaaatgctgcataaatccaagagatgctttctcagcaaagggttgtt
tattcgagaaggctgtggctcattagtccccactgagacatatccaccac
tcctaggtacaatgaaatgtctggcagagctgttgacaggtcctaaatgt
atcagtaaccactgtgccagagcctgtgctcaatgaggaggactcagaga
agcaaaagacacagctcctgtttcctgggacaaatcctatcaaggggaga
cggatgtttatatcatgatacactacataaaatggtaatgtttgacatcc
atacagagagtccatactagaagtatttcaaaagttgggaaactttttgc
tgtccctatttctgatgacaccagaaagactgaaaaaaaaaaaaaaacca
aattgctcaaaaacacctgcctacctgtgacctatctttcccagcccttt
ataacatttaaaaatattataaaactttttaaaaatgcagtgtcactatt
tcccactacaccgtggagtctttctattttgccccaaaattagttagccc
actgggaggaaagcacatgttttcttgggccagaacagctctgggtcacc
agaaaatatatggggaccaaatggtttagaaacacagtgaggaataggac
acacttcctgtcaactctctcctaggctagtaaattatcagaaagaaggg
gtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117087829_117088579
seq2: B6Ng01-281G11.b_46_796 (reverse)

seq1  GACTTCCCCTACCCCTACCCCAAGGCAGGTCTCACTGTATAGCTCTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCCTACCCCTACCCCAAGGCAGGTCTCACTGTATAGCTCTGACA  50

seq1  GTCCTGGAGCTGCTGCGTACACAGGCTGATCTCTAGCACACAGATCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAGCTGCTGCGTACACAGGCTGATCTCTAGCACACAGATCCTCC  100

seq1  TGTCTGCTTCTTTTCTGGTTTGTTTCACAGTGCACCTTGCATTCTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTCTTTTCTGGTTTGTTTCACAGTGCACCTTGCATTCTCTCTC  150

seq1  CAGCTCTGGTGTTGACAGAGAATCTGATGAGCTAAGATTCACAGAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGGTGTTGACAGAGAATCTGATGAGCTAAGATTCACAGAAGAGG  200

seq1  CTGAAAGGAGGATGGCAGGAAGTGAGATGGTGCTGAATGACTCACTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGAGGATGGCAGGAAGTGAGATGGTGCTGAATGACTCACTAATT  250

seq1  TCAATAATAAAGGAAAAAAGGTAAGGCTTCTATAGCACTCCCTTAGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATAAAGGAAAAAAGGTAAGGCTTCTATAGCACTCCCTTAGCACA  300

seq1  GCCTCACTTGCCCCTATAATTCCATGTGCATTGGATTTACTTTCTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTTGCCCCTATAATTCCATGTGCATTGGATTTACTTTCTCCCTC  350

seq1  CCGCAATCCTACAAACTAGTTCTGACTAGTTTGCCATTCTCAGCCTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAATCCTACAAACTAGTTCTGACTAGTTTGCCATTCTCAGCCTCAGA  400

seq1  ACTGCAAGTGAAGCAGGAGTAACCAGCCCCAAAGCCCAACACTGCCGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGTGAAGCAGGAGTAACCAGCCCCAAAGCCCAACACTGCCGTTC  450

seq1  CTTCCTCAGTCCCAGCCTCCCTGAAGAACAAGTGGCTAAGTAAATATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCAGTCCCAGCCTCCCTGAAGAACAAGTGGCTAAGTAAATATGGA  500

seq1  GCTTTCATTCCCGACTGTTGCCAAAACTGTGGCAGAGTGCTTACTCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATTCCCGACTGTTGCCAAAACTGTGGCAGAGTGCTTACTCAGCA  550

seq1  TGCACAATGTCCTGGGGTCAATCCCGATCACTGAAAAGGGAATGGGACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATGTCCTGGGGTCAATCCCGATCACTGAAAAGGGAATGGGACAC  600

seq1  GCTCTCATAATTAGTATAGTATATACATCAGGGATTGGTTAGTTTGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCATAATTAGTATAGTATATACATCAGGGATTGGTTAGTTTGATAA  650

seq1  AATATAGGTTTCTAAGCCCCACTCCCAAATTTTCTGTTTCTAAAGGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGGTTTCTAAGCCCCACTCCCAAATTTTCTGTTTCTAAAGGCAAA  700

seq1  ATATGTAGCCCGGCCAGGTTCTCTGGCATACATCTGAAATCCTAGGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGCCCGGCCAGGTTCTCTGGCATACATCTGAAATCCTAGGAATT  750

seq1  C  751
      |
seq2  C  751

seq1: chr7_116894051_116895007
seq2: B6Ng01-281G11.g_70_1027

seq1  GAATTCTTCTAATTTCTTCTTTTCTAACTTTTTCCTTTTGGGAGAAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAATTTCTTCTTTTCTAACTTTTTCCTTTTGGGAGAAAGGC  50

seq1  ACTGGGCATGGATAAAAGGGGCTGAGTGAGCTATAAACAGGATGAAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCATGGATAAAAGGGGCTGAGTGAGCTATAAACAGGATGAAGATT  100

seq1  GAGGGGCACTCAGCCAGTGCTAGAAGGGAAGTCAAAAGGGAAAGTAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCACTCAGCCAGTGCTAGAAGGGAAGTCAAAAGGGAAAGTAGTTT  150

seq1  GAATCTTCCCATTGTCCCCCAGGAAACTTGTCTGGCAATCCATGGTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCCCATTGTCCCCCAGGAAACTTGTCTGGCAATCCATGGTTGAC  200

seq1  AAGAAAAGCAACTCCTAGCAATACGAGTTTCAGGAGGCAAAGCAAGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGCAACTCCTAGCAATACGAGTTTCAGGAGGCAAAGCAAGCAGG  250

seq1  CATTAAATGCTGCATAAATCCAAGAGATGCTTTCTCAGCAAAGGGTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATGCTGCATAAATCCAAGAGATGCTTTCTCAGCAAAGGGTTGTT  300

seq1  TATTCGAGAAGGCTGTGGCTCATTAGTCCCCACTGAGACATATCCACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCGAGAAGGCTGTGGCTCATTAGTCCCCACTGAGACATATCCACCAC  350

seq1  TCCTAGGTACAATGAAATGTCTGGCAGAGCTGTTGACAGGTCCTAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTACAATGAAATGTCTGGCAGAGCTGTTGACAGGTCCTAAATGT  400

seq1  ATCAGTAACCACTGTGCCAGAGCCTGTGCTCAATGAGGAGGACTCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAACCACTGTGCCAGAGCCTGTGCTCAATGAGGAGGACTCAGAGA  450

seq1  AGCAAAAGACACAGCTCCTGTTTCCTGGGACAAATCCTATCAAGGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGACACAGCTCCTGTTTCCTGGGACAAATCCTATCAAGGGGAGA  500

seq1  CGGATGTTTATATCATGATACACTACATAAAATGGTAATGTTTGACATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGTTTATATCATGATACACTACATAAAATGGTAATGTTTGACATCC  550

seq1  ATACAGAGAGTCCATACTAGAAGTATTTCAAAAGTTGGGAAACTTTTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAGTCCATACTAGAAGTATTTCAAAAGTTGGGAAACTTTTTGC  600

seq1  TGTCCCTATTTCTGATGACACCAGAAAGACTGAAAAAAAAAAAAAAACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTATTTCTGATGACACCAGAAAGACTGAAAAAAAAAAAAAAACCA  650

seq1  AATTGCTCAAAAACACCTGCCTACCTGTGACCTATCTTTCCCAGCCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTCAAAAACACCTGCCTACCTGTGACCTATCTTTCCCAGCCCTTT  700

seq1  ATAACATTTAAAAATATTATAAAACTTTTTAAAAATGCAGTGTCACTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATTTAAAAATATTATAAAACTTTTTAAAAATGCAGTGTCACTATT  750

seq1  TCCCACTACACCGTGGAGTCTTTCTATTTTGCCCCAAAATTAGTTAGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTACACCGTGGAGTCTTTCTATTTTGCCCCAAAATTAGTTAGCCC  800

seq1  ACTGGGAGGAAAGCACATGTTTTCTTGGGCCAGAACAGCTCTGGGTCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAGGAAAGCACATGTTTTCTTGGGCCAGAACAGCTCTGGGTCACC  850

seq1  AGAAAATATATGGGGACCAAAAGGTTTAGAAACACAGTGAGGAATAGGAC  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAAAATATATGGGGACCAAATGGTTTAGAAACACAGTGAGGAATAGGAC  900

seq1  ACAACTTCCTGTCACCTCTCTCCTAGGCTAGTAAATTATCAGAA--GAGG  948
      || ||||||||||| |||||||||||||||||||||||||||||   |||
seq2  AC-ACTTCCTGTCAACTCTCTCCTAGGCTAGTAAATTATCAGAAAGAAGG  949

seq1  GGTGTGTGT  957
      |||||||||
seq2  GGTGTGTGT  958