BAC Information

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BAC

Clone NameB6Ng01-282C14
Chromosome7 (Build37)
Map Location 72,379,050 - 72,380,210
singlet/doubletsinglet
Overlap genenone
Upstream geneTrpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
Downstream geneTjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1, H47, Chsy1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282C14.bB6Ng01-282C14.g
ACCGA081452GA081453
length1,1511,184
definitionB6Ng01-282C14.b B6Ng01-282C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggggttcctagcaggcagtctcctagagaacttactcttacag
gacagatgttggagctgaaataaccaacagagtggtgactcattcagcaa
gcagaattcattccaacagggtgcaggactaatggcaatgtctgctccaa
tcccaacattagcaaaccaggccagatgtgggaagtctcatgttctcgca
gattccctcaggatggctgggcagctgggtgaagaatggctggtttctct
taccattcccatcgcttgtgccttcttcccaagactagacttctttatat
agacagcaaagaagaagtggggaagaagcaggttgaggtggctcaggaag
gatctaagccaagtgacagaattgccagtggcctctcagcctaatgttgg
agtctgtcaccaaggccttgtctactgggggtctgaagacaaagtctggg
gtacagtgcaccaggcctgtgctatgtctgtgtctcttcccttctactga
atgggcaggggtggagggcttcaagcccttacagacaagggcagtttagc
accgctgtggcagcattaacccccacacagggtgactccaagcctcgata
ctgaccactgggaaacactgatactggcatttaggggattgtgggaaatg
gtgcacgtatttaagggaggaaaggactgcttccttcccattcctctcag
tctccccgtgggaaggaaggcttgactcttgggcttgttcctctgtgaag
gtggatttgtgacaggctgtctggctaacagcaagcacttgaggacttct
gtgtcagtgtcatttgtcatttctaagtgtgggggaagcagatttctatt
tgaggtgatagtgcctgcagagggacttgtgtcaggacaacacacactgt
tcatttcaataccagagcagcgaggaaccaagcagagaaacctccctttc
caaaaggctgcaatacatgcacaggctttcttcgctgcaagttgcaatgc
actttaaaacgaatgtagcccgattctcacacattttcacatggacactt
atggatgggaaaatgaaccaaaatgcctgagacttttcagtccaaagcca
cctgtagagtaatatctggcttgaaggcagccaaggctctcagtctaggc
a
gaattcttcttgtttaattttggtggttggtctgaatctagaaattcatt
tatttcttttaggttttcaaatttagtggcataccagttttaagtgtgtt
ccctcataacattctgaatttggtgtctgctgtaacattttcctgttcat
ttctaatcctgttcacttgtatcctctctttttttcttctgggattgggc
caagagtctgtcaatctcgtttatctgctccaagaaccccgctcagagat
tcattgatcctttggagttttcttttttctgtttctggaccattaacgtc
tgctctggcttttattatttctcgatctcaagtggatttgggtttggttt
gttcttcttgttccaaagttttgagtttcatcattaagtcatttatttgt
gttctctctgactctttcatgtaagcatttagagctataaatttccctcc
caggacggtttccatgcgtcctagagattctgttgggttgtgttctcgtt
tttgtttagttcaggagatttttactcctttctctatttcttctttgatc
tattcatcattataacgggttgtttaatcttcatgagtttgtgtatttac
tagagaagtttgttttcctgtcaattttaggttttattgcattgcattca
gataacactgagttatttcaatcattttgaatttgtgcagattagttttg
tgtgccaggatgtgatctggtttagaaaagcttccacatgctgctgggta
gaactgatctcagcggattctgatgttcctctgcttttggtctggatgac
ttttctattgtagaaagtggagcactggcatcgctaccattgatgggtta
atgttagtctgtgtctttgtacccagtagtattttttcatgagattgggt
gcaccagactgcacatagaatgcatatatgtgttatatatgtcttcttgg
ttcactgttctcttgatcaggaatgaagtgtcctttttttctcttctact
gaataagttttagtttgaagtctactttgtccactgcttctttctgtcca
tttgaattagaactgctgcatccattctttttatctatgtgctagctttt
aagctaagaactatttctataggccatgttgtgcaacctggctactagcc
agggcatatagaaagtcttggtggtggtggtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72379050_72380210
seq2: B6Ng01-282C14.b_46_1196 (reverse)

seq1  TGCCTAGACCTGAGAGCC-TGGCTGCTTTTCAAGCCAGATATTTTCTCTA  49
      |||||||| ||||||||| |||||||  ||||||||||||| || |||||
seq2  TGCCTAGA-CTGAGAGCCTTGGCTGC-CTTCAAGCCAGATA-TTACTCTA  47

seq1  CAGTTGCTTTGGGACTGAAAAGTTCCTCAGCATTTTTGTTTCATTTTCCC  99
      ||| ||  || ||||||||||||  |||||   ||||| |||||||||||
seq2  CAGGTGGCTTTGGACTGAAAAGT--CTCAGGCATTTTGGTTCATTTTCCC  95

seq1  ATCCATAAGTGTTCCATGGTGAAATGTGGTGAAGAATCGGGCTAACAATT  149
      ||||||||||| ||||||   |||||| ||| ||||||||||||   |||
seq2  ATCCATAAGTG-TCCATGTGAAAATGT-GTG-AGAATCGGGCTA--CATT  140

seq1  CGTTTTTAAAGTGCATTGCAACTTGCAGCGGAAGAAAGCCTGTGCATGTA  199
      || |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CG-TTTTAAAGTGCATTGCAACTTGCAGC-GAAGAAAGCCTGTGCATGTA  188

seq1  TTGCAGCCTTT--GGAAGGGAGGTTTCTCTGCTTGGTTCCTCGCTGCTCT  247
      |||||||||||  | |||||||||||||||||||||||||||||||||||
seq2  TTGCAGCCTTTTGGAAAGGGAGGTTTCTCTGCTTGGTTCCTCGCTGCTCT  238

seq1  GGTATTGAAATGAACAGTGTGTGTTGTCCCTGACACAAGTCCCTCTGCAG  297
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGTATTGAAATGAACAGTGTGTGTTGT-CCTGACACAAGTCCCTCTGCAG  287

seq1  GCACTATCACCTCAAATAGAAATCTGCTTCCCCCACACTTAGAAATGACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATCACCTCAAATAGAAATCTGCTTCCCCCACACTTAGAAATGACA  337

seq1  AATGACACTGACACAGAAGTCCTCAAGTGCTTGCTGTTAGCCAGACAGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACTGACACAGAAGTCCTCAAGTGCTTGCTGTTAGCCAGACAGCC  387

seq1  TGTCACAAATCCACCTTCACAGAGGAACAAGCCCAAGAGTCAAGCCTTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAAATCCACCTTCACAGAGGAACAAGCCCAAGAGTCAAGCCTTCC  437

seq1  TTCCCACGGGGAGACTGAGAGGAATGGGAAGGAAGCAGTCCTTTCCTCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACGGGGAGACTGAGAGGAATGGGAAGGAAGCAGTCCTTTCCTCCC  487

seq1  TTAAATACGTGCACCATTTCCCACAATCCCCTAAATGCCAGTATCAGTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACGTGCACCATTTCCCACAATCCCCTAAATGCCAGTATCAGTGT  537

seq1  TTCCCAGTGGTCAGTATCGAGGCTTGGAGTCACCCTGTGTGGGGGTTAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTGGTCAGTATCGAGGCTTGGAGTCACCCTGTGTGGGGGTTAAT  587

seq1  GCTGCCACAGCGGTGCTAAACTGCCCTTGTCTGTAAGGGCTTGAAGCCCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCACAGCGGTGCTAAACTGCCCTTGTCTGTAAGGGCTTGAAGCCCT  637

seq1  CCACCCCTGCCCATTCAGTAGAAGGGAAGAGACACAGACATAGCACAGGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTGCCCATTCAGTAGAAGGGAAGAGACACAGACATAGCACAGGC  687

seq1  CTGGTGCACTGTACCCCAGACTTTGTCTTCAGACCCCCAGTAGACAAGGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCACTGTACCCCAGACTTTGTCTTCAGACCCCCAGTAGACAAGGC  737

seq1  CTTGGTGACAGACTCCAACATTAGGCTGAGAGGCCACTGGCAATTCTGTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGACAGACTCCAACATTAGGCTGAGAGGCCACTGGCAATTCTGTC  787

seq1  ACTTGGCTTAGATCCTTCCTGAGCCACCTCAACCTGCTTCTTCCCCACTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCTTAGATCCTTCCTGAGCCACCTCAACCTGCTTCTTCCCCACTT  837

seq1  CTTCTTTGCTGTCTATATAAAGAAGTCTAGTCTTGGGAAGAAGGCACAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGCTGTCTATATAAAGAAGTCTAGTCTTGGGAAGAAGGCACAAG  887

seq1  CGATGGGAATGGTAAGAGAAACCAGCCATTCTTCACCCAGCTGCCCAGCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGGAATGGTAAGAGAAACCAGCCATTCTTCACCCAGCTGCCCAGCC  937

seq1  ATCCTGAGGGAATCTGCGAGAACATGAGACTTCCCACATCTGGCCTGGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAGGGAATCTGCGAGAACATGAGACTTCCCACATCTGGCCTGGTT  987

seq1  TGCTAATGTTGGGATTGGAGCAGACATTGCCATTAGTCCTGCACCCTGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATGTTGGGATTGGAGCAGACATTGCCATTAGTCCTGCACCCTGTT  1037

seq1  GGAATGAATTCTGCTTGCTGAATGAGTCACCACTCTGTTGGTTATTTCAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATTCTGCTTGCTGAATGAGTCACCACTCTGTTGGTTATTTCAG  1087

seq1  CTCCAACATCTGTCCTGTAAGAGTAAGTTCTCTAGGAGACTGCCTGCTAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACATCTGTCCTGTAAGAGTAAGTTCTCTAGGAGACTGCCTGCTAG  1137

seq1  GAACCCCAGAATTC  1161
      ||||||||||||||
seq2  GAACCCCAGAATTC  1151