BAC Information

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BAC

Clone NameB6Ng01-282G04
Chromosome7 (Build37)
Map Location 112,763,494 - 112,961,030
singlet/doubletdoublet
Overlap geneTrim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17
Upstream geneOlfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn
Downstream gene9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282G04.bB6Ng01-282G04.g
ACCGA081618GA081619
length1,162545
definitionB6Ng01-282G04.b B6Ng01-282G04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,763,494 - 112,764,649)(112,960,486 - 112,961,030)
sequence
gaattccaattttccaggtcacttctttagagattcccctttgttcagat
caatacatacatgtaaagttagggccctacagtatgcattttatagcttt
ctttgtgacagctatcactttgtagctgtatctgtgacctgccccttcta
aggatgcaagctgtgtttggagctggcgctgcatctgttttgtctgcagc
tgcattttcagtggtgtgtagcttctgtcatctactacgcattcaaccaa
caaaagaactcccaattcaatctcaggcctgaactcgatggacagatcca
tttggaagccacccagcagcctcaaaatgcaataggggtaaaagcgaact
cttcaacttcaaaggggcctgcttcttaaggggaacaccccacatgtggc
ccactaagcccctccactctccatcccatccctctttaccatgacatctg
gtactcagtaaaagctgccacactgtttcgcagcactagattttgctaca
ttaagtagatcgctgacttcaaagatctcaaaggaaatgacaacaaaaag
atacaagatacaagaagacaaaaccaacaaaccaagccagagaaggaaaa
gtgtgaaaaccaccacagggaagggctgggagaggtcagaggatcacagc
agaaaggatgtccccagaaagagctcaccaacgtttttggactatgacaa
tgattcaatgccaagtatttacacatcaagttattcattcaaaatcagtc
ttttcttgctgttgtgtgtgcctgctctatcagcagtgttccaccctgct
tgactgaacaagctcacaaggaaccccagcctcaggagcaaaccaggagg
gggaggtggtgtcatatcttatcaggcctgagtagcccagagtaagagag
gcaagtgctcagcactgggaatccaagaagcttccagcagctatgatgtc
aggtggacttgggaatggagcgttgagcaaggactgtttagagaatagca
gtgttttggaagagaggactatgccaggcctctctcacagccctcactag
atggtcaagcagtacccagctgttttctgcatgtggtgggtaagtgccca
gtgtttggtaccaacattgacaggatgttccacaatctcacttgggctag
aaagcaatttct
gaattcattttaaataagccctaatatgatcatcattttgttaaatacta
gagctagactatattttcacccaattcctcccagaaaactgttttcaaag
agccataaggatgctgagcaatggaagggaacacacacacacacaaacac
acagaactttttttttaagaaaaagtattcatccacccagagacctaggg
aagaaccaaactgtagtgccgaaaataaataaaaaaaattcaatgagatg
gttcctagtgatattctgctagattcatagattggtgcctaactcagtcg
tcatcagagaggctgcctcttgcagctgatgggagatgtagaggcccact
gacaaacattaagaggagaaagaacctgggttggaggcctacataaggtc
ccgccccttggagctcgggaaacccagcagaagacaaggaagaataattg
tgggagccagaggggtcgaacacaggtgaggacagcctgtagaatcaact
gagcagggcttatggaagctcaaagaaggggcaatcatggagccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112763494_112764649
seq2: B6Ng01-282G04.b_42_1203

seq1  GAATTCCAATTTTCCAGGTCACTTCTTTAGAGATTCCCCTTTGTTCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTTTCCAGGTCACTTCTTTAGAGATTCCCCTTTGTTCAGAT  50

seq1  CAATACATACATGTAAAGTTAGGGCCCTACAGTATGCATTTTATAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATACATGTAAAGTTAGGGCCCTACAGTATGCATTTTATAGCTTT  100

seq1  CTTTGTGACAGCTATCACTTTGTAGCTGTATCTGTGACCTGCCCCTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGACAGCTATCACTTTGTAGCTGTATCTGTGACCTGCCCCTTCTA  150

seq1  AGGATGCAAGCTGTGTTTGGAGCTGGCGCTGCATCTGTTTTGTCTGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCAAGCTGTGTTTGGAGCTGGCGCTGCATCTGTTTTGTCTGCAGC  200

seq1  TGCATTTTCAGTGGTGTGTAGCTTCTGTCATCTACTACGCATTCAACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTCAGTGGTGTGTAGCTTCTGTCATCTACTACGCATTCAACCAA  250

seq1  CAAAAGAACTCCCAATTCAATCTCAGGCCTGAACTCGATGGACAGATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAACTCCCAATTCAATCTCAGGCCTGAACTCGATGGACAGATCCA  300

seq1  TTTGGAAGCCACCCAGCAGCCTCAAAATGCAATAGGGGTAAAAGCGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGCCACCCAGCAGCCTCAAAATGCAATAGGGGTAAAAGCGAACT  350

seq1  CTTCAACTTCAAAGGGGCCTGCTTCTTAAGGGGAACACCCCACATGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTTCAAAGGGGCCTGCTTCTTAAGGGGAACACCCCACATGTGGC  400

seq1  CCACTAAGCCCCTCCACTCTCCATCCCATCCCTCTTTACCATGACATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAGCCCCTCCACTCTCCATCCCATCCCTCTTTACCATGACATCTG  450

seq1  GTACTCAGTAAAAGCTGCCACACTGTTTCGCAGCACTAGATTTTGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAGTAAAAGCTGCCACACTGTTTCGCAGCACTAGATTTTGCTACA  500

seq1  TTAAGTAGATCGCTGACTTCAAAGATCTCAAAGGAAATGACAACAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAGATCGCTGACTTCAAAGATCTCAAAGGAAATGACAACAAAAAG  550

seq1  ATACAAGATACAAGAAGACAAAACCAACAAACCAAGCCAGAGAAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGATACAAGAAGACAAAACCAACAAACCAAGCCAGAGAAGGAAAA  600

seq1  GTGTGAAAACCACCACAGGGAAGGGCTGGGAGAGGTCAGAGGATCACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAACCACCACAGGGAAGGGCTGGGAGAGGTCAGAGGATCACAGC  650

seq1  AGAAAGGATGTCCCCAGAAAGAGCTCACCAACGTTTTTGGACTATGACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGATGTCCCCAGAAAGAGCTCACCAACGTTTTTGGACTATGACAA  700

seq1  TGATTCAATGCCAAGTATTTACACATCAAGTTATTCATTCAAAATCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAATGCCAAGTATTTACACATCAAGTTATTCATTCAAAATCAGTC  750

seq1  TTTTCTTGCTGTTGTGTGTGCCTGCTCTATCAGCAGTGTTCCACCCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCTGTTGTGTGTGCCTGCTCTATCAGCAGTGTTCCACCCTGCT  800

seq1  TGACTGAACAAGCTCACAAGGAACCCCAGCCTCAGGAGCAAACCAGGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAACAAGCTCACAAGGAACCCCAGCCTCAGGAGCAAACCAGGAGG  850

seq1  GGGAGGTGGTGTCATATCTTATCAGGCCTGAGTAGCCCAGAGTAAGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTGGTGTCATATCTTATCAGGCCTGAGTAGCCCAGAGTAAGAGAG  900

seq1  GCAAGTGCTCAGCACT-GGAATCCAAGAAGCTTCCAGCAGCTATGATGTC  949
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCAAGTGCTCAGCACTGGGAATCCAAGAAGCTTCCAGCAGCTATGATGTC  950

seq1  AGGGTGGACTTGGGAATGGAGCGTTGAGCAAGGACTG-TTAGAGAATAGC  998
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  A-GGTGGACTTGGGAATGGAGCGTTGAGCAAGGACTGTTTAGAGAATAGC  999

seq1  AGGTGTTTGGAAGAGAGGACTATGCCAGGCCTCTCTCACAGCCCTCCACT  1048
      ||   |||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGTGTTTTGGAAGAGAGGACTATGCCAGGCCTCTCTCACAGCCCT-CACT  1048

seq1  AGATGGTCAAGCAGTA-CCAG-TG-TTTCTGCATGTG--TGGTAAGTGCC  1093
      |||||||||||||||| |||| || ||||||||||||   ||||||||||
seq2  AGATGGTCAAGCAGTACCCAGCTGTTTTCTGCATGTGGTGGGTAAGTGCC  1098

seq1  CAAGTGTTT-GTA-CAACA-TGACA-GATG-TCCACAAATCTCAACCTTT  1138
      | ||||||| ||| ||||| ||||| |||| ||||| |||||||    ||
seq2  C-AGTGTTTGGTACCAACATTGACAGGATGTTCCAC-AATCTCA---CTT  1143

seq1  GGGCTAGGAAGC-ATTTCT  1156
      ||||||| |||| ||||||
seq2  GGGCTAGAAAGCAATTTCT  1162

seq1: chr7_112960486_112961030
seq2: B6Ng01-282G04.g_65_609 (reverse)

seq1  GGGCTCCATGATTGCCCCTTCTTTGAGCTTCCATAAGCCCTGCTCAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCATGATTGCCCCTTCTTTGAGCTTCCATAAGCCCTGCTCAGTTG  50

seq1  ATTCTACAGGCTGTCCTCACCTGTGTTCGACCCCTCTGGCTCCCACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAGGCTGTCCTCACCTGTGTTCGACCCCTCTGGCTCCCACAATT  100

seq1  ATTCTTCCTTGTCTTCTGCTGGGTTTCCCGAGCTCCAAGGGGCGGGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCCTTGTCTTCTGCTGGGTTTCCCGAGCTCCAAGGGGCGGGACCT  150

seq1  TATGTAGGCCTCCAACCCAGGTTCTTTCTCCTCTTAATGTTTGTCAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGCCTCCAACCCAGGTTCTTTCTCCTCTTAATGTTTGTCAGTGG  200

seq1  GCCTCTACATCTCCCATCAGCTGCAAGAGGCAGCCTCTCTGATGACGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTACATCTCCCATCAGCTGCAAGAGGCAGCCTCTCTGATGACGACT  250

seq1  GAGTTAGGCACCAATCTATGAATCTAGCAGAATATCACTAGGAACCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGGCACCAATCTATGAATCTAGCAGAATATCACTAGGAACCATCT  300

seq1  CATTGAATTTTTTTTATTTATTTTCGGCACTACAGTTTGGTTCTTCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATTTTTTTTATTTATTTTCGGCACTACAGTTTGGTTCTTCCCTA  350

seq1  GGTCTCTGGGTGGATGAATACTTTTTCTTAAAAAAAAAGTTCTGTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGGGTGGATGAATACTTTTTCTTAAAAAAAAAGTTCTGTGTGTT  400

seq1  TGTGTGTGTGTGTGTTCCCTTCCATTGCTCAGCATCCTTATGGCTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTTCCCTTCCATTGCTCAGCATCCTTATGGCTCTTTG  450

seq1  AAAACAGTTTTCTGGGAGGAATTGGGTGAAAATATAGTCTAGCTCTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTTTTCTGGGAGGAATTGGGTGAAAATATAGTCTAGCTCTAGTA  500

seq1  TTTAACAAAATGATGATCATATTAGGGCTTATTTAAAATGAATTC  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAAATGATGATCATATTAGGGCTTATTTAAAATGAATTC  545