BAC Information

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BAC

Clone NameB6Ng01-282I19
Chromosome7 (Build37)
Map Location 112,405,773 - 112,406,101
singlet/doubletsinglet
Overlap geneEG668035
Upstream geneEG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686
Downstream geneOlfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282I19.bB6Ng01-282I19.g
ACCGA081736GA081737
length9331,188
definitionB6Ng01-282I19.b B6Ng01-282I19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcttgctcccatattcgccttcattcctcaggaagtaagtta
ttagtaactatcatatgtacatcatgggaagtcaagatataagactgagt
aatatagtgaaactctttaataaaagcagaggagttagtggcataataac
ccattctgctttctatttgagataattcactcagtgagaaaggaacatgt
actctgacaaggccatctacccctgcaacttctcttagaggaaggaccaa
tgctgggtcaggtttccatgggggagaaggacttggggctttggctttgg
ccttagagcacgtggtaggagaagcaacctgtagctggcacagaagaagg
gaaggggcctggagaggtagagatagtaggctctgggatatcctggtgag
aaggagaaactgaggcggcaatttgggttttcagtggcatggaaacaggt
ctgcggcagaaaggaggtggttggttagctggatctagcattgtagcatc
atctggcaggggttacataggtgtcacggctaagaggatccatcccataa
tcagcttccaaacgctgacactattgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgtgagactatgcaggggcctagcaa
acacagaagtggatgatcacagtcagctattggatggatcacagagtccc
caatggaggaactagagaaagtacccaaggagctaaagggatctgcaaac
ctataggtggaacaactggtactaaccagtacccctgagctcttgactct
agctgcatatgtatcaaaagacggcctagtcagccatcactggaaaaaga
ggcccattggacttgcaaactttatatgccccagtacagaggaacgccag
ggccaaaaagtgggagtgggtggggtaagggga
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggatagataaagttcctttcccaatctgttgttggcatt
tttgtcttattgacggtgtcttttgccttacagaagctttgaaattttat
gaggtcctatttgtagattctcgatcttatggcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ctacttagatttgacataagtacaaggagataggaatggataaatttgca
cttctacatgataaccgcccattgtgccagcaccatttgttaaaaatgtt
gtcttttttccactggatggtattagctcccttgtcaaagagcaagtgac
cataggtgtgtgggcatctctttctttaaggtttgggaagtttgctgcta
ttattttgttgaagatatttgctggccctttacgttgaaaatcttcattc
tcatctactcctattattcataagtttggtcttctcattttgtcctggat
gttttgatttaggatccttttgcattttgcattttctctgattgttgtac
caatgttctctatgggatcttctgcacctgagattctctcttccttctct
tgtattctgttgcagatgctcgcatctatatttccagatttctttcctag
ggtttctatttccagcattgcctcacttttgggttttctttattgtgtct
acttctctttttaggtctagtattgttttgttcaatttccatcacctgtt
tggatgtgttttcctgtttttctttaaggacttctacctgtttggttttg
tttcccgtttttctttaaagacttttaaactctttagctgtgttctaatg
aatttccttagtgaagtattaaagtcctttcttgatgtcctctaccttca
tcattgaagatatgcttttaagtcgctctaatctctttcaagtgtctggg
gggtccaggactggccgaaggtgggaattgctgaattctgagatgctgat
gcaccttaggattctggctataagagaattcctctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112405773_112406101
seq2: B6Ng01-282I19.b_653_980 (reverse)

seq1  TCCCCT--ACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTAT  48
      ||||||   ||||||||||||| |||||||||||||||||||| ||||| 
seq2  TCCCCTTACCCCACCCACTCCCACTTTTTGGCCCTGGCGTTCCTCTGTAC  50

seq1  TGGGGCATATAAAGTTTGCATGTCCAACGGGCCTCTCTTTCCAGTGATGG  98
      |||||||||||||||||||| |||||| |||||||| |||||||||||||
seq2  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTTTTCCAGTGATGG  100

seq1  CCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGG  148
      | ||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  CTGACTAGGCCGTCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCAGG  150

seq1  GGTACTGGTTAGTTCATAATGTTGTTCCGCCTATAGGGTTGCAGATCCCT  198
      ||||||||||||| |     |||||||| |||||||| ||||||||||||
seq2  GGTACTGGTTAGTAC---CAGTTGTTCCACCTATAGGTTTGCAGATCCCT  197

seq1  TCAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATC  248
      | |||||||||| |||||||||||| ||||||||||||  | ||||||||
seq2  TTAGCTCCTTGGGTACTTTCTCTAGTTCCTCCATTGGGGACTCTGTGATC  247

seq1  CATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGG  298
      |||||| ||||||||||||| ||||||||||||||||||||||||||| |
seq2  CATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCCCTG  297

seq1  CATAGTCTCACAAGAGACAGCTACATCTGGG  329
      ||||||||||||||||||||||| |||||||
seq2  CATAGTCTCACAAGAGACAGCTATATCTGGG  328