BAC Information

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BAC

Clone NameB6Ng01-282I21
Chromosome7 (Build37)
Map Location 138,909,798 - 139,087,846
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679
Downstream geneGpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282I21.bB6Ng01-282I21.g
ACCGA081740GA081741
length817710
definitionB6Ng01-282I21.b B6Ng01-282I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,087,304 - 139,087,846)(138,909,798 - 138,910,504)
sequence
gaattcagtaagaatgttgcctatttagtgacattcagaattgcctctag
tattgtaagagagacagtgaaagaaatcaggcattactatctcctaccta
gagttagaatctcagggcaagcttagcaaagtatacttagagtcttcatt
acagtcaggtatggcagactacattacttattattagaaagtccccacac
acaatcacttagaataatagccaagttactcccatatgcaggaatttacc
attatctaggaagaaggaaggttgtggtctaaggaggaaccagagtagat
acttagaactatagatagctgagttacacccatacacaggaatttacaat
gtcctaggggggaggtggactatacaatagactagaattagaactatggc
aagggcacgaagcccttgcccctgactgctaagattaagctgaccttagg
tggggctgcttttgatcccagttgttaacattgattttatcccagttggt
tcctgccagtcctttgaaggcattcctctgttttgtgtcagatacttcaa
tgtaccttgcctgctgtgatatcctactcctctgttttctgtattatata
aaactgatgctcattttgagacaaattacattcagatatacactctctca
gtgtctgtatttgtttgccatttctcgccaactctctctttgcccacctg
taaccagaacccgtttcacccatggatagaggacccaagtgaggtttgtc
tgtggcagggaaagatcacatatgctttatttggagattaatgagtgggt
ggaagggatggatggac
gaattctcagagctactctaaatacgttgactgtgagagatgctcagtca
cattgctaccaagcggggctctccactacatcaccgtgagctagtgtatt
tgactgatagggtgaaaagggtatttagtgtagccagtagattaaaaaaa
attacaaacaaacaaacaaaacctttttcctgagattatgaaagatttta
attcaaatgttggaggggaggaccactaattgagaccctccccccacgtc
cctcccccccccccaattctgagcagcctcagagcaaaagagtgagcctt
gctttaagggcacggtatgctgtggcaacagtgatggatatgctaatttc
ttcattcactccacttcacttcttttattctttccaattaaagcaaatgc
tactgaaaccgtaattaaggctgggctgggccctgcctgcctgctgcttt
aatgaagccctattgatttttcttttctttctaatggccacacagggttc
tcaatggtcaaacatatgcctggctaccatgtcctgctaaaacttaattt
tagcctagcaaaaaaaaaaaaaatggaggcccaggagaacggggttacca
ggacaatttgtggaaggggtggttttggaaggctcctttaggtttttttt
tggggtgtggtgtgtgacacatacctacaatgactgacccatcaagagga
tatgagggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_139087304_139087846
seq2: B6Ng01-282I21.b_320_863 (reverse)

seq1  GTCCATCCAT-CCTTCCACCCACTCATTAATCTCCAAATAAAGCATATGT  49
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCCATCCCTTCCACCCACTCATTAATCTCCAAATAAAGCATATGT  50

seq1  GATCTTTCCCTGCCACAGACAAACCTCACTTGGGTCCTCTATCCATGGGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTCCCTGCCACAGACAAACCTCACTTGGGTCCTCTATCCATGGGT  100

seq1  GAAACGGGTTCTGGTTACAGGTGGGCAAAGAGAGAGTTGGCGAGAAATGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGGGTTCTGGTTACAGGTGGGCAAAGAGAGAGTTGGCGAGAAATGG  150

seq1  CAAACAAATACAGACACTGAGAGAGTGTATATCTGAATGTAATTTGTCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATACAGACACTGAGAGAGTGTATATCTGAATGTAATTTGTCTC  200

seq1  AAAATGAGCATCAGTTTTATATAATACAGAAAACAGAGGAGTAGGATATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGCATCAGTTTTATATAATACAGAAAACAGAGGAGTAGGATATC  250

seq1  ACAGCAGGCAAGGTACATTGAAGTATCTGACACAAAACAGAGGAATGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGCAAGGTACATTGAAGTATCTGACACAAAACAGAGGAATGCCT  300

seq1  TCAAAGGACTGGCAGGAACCAACTGGGATAAAATCAATGTTAACAACTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGACTGGCAGGAACCAACTGGGATAAAATCAATGTTAACAACTGG  350

seq1  GATCAAAAGCAGCCCCACCTAAGGTCAGCTTAATCTTAGCAGTCAGGGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAAGCAGCCCCACCTAAGGTCAGCTTAATCTTAGCAGTCAGGGGC  400

seq1  AAGGGCTTCGTGCCCTTGCCATAGTTCTAATTCTAGTCTATTGTATAGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTCGTGCCCTTGCCATAGTTCTAATTCTAGTCTATTGTATAGTC  450

seq1  CACCTCCCCCCTAGGACATTGTAAATTCCTGTGTATGGGTGTAACTCAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCCCCTAGGACATTGTAAATTCCTGTGTATGGGTGTAACTCAGC  500

seq1  TATCTATAGTTCTAAGTATCTACTCTGGTTCCTCCTTAGACCAC  543
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATAGTTCTAAGTATCTACTCTGGTTCCTCCTTAGACCAC  544

seq1: chr7_138909798_138910504
seq2: B6Ng01-282I21.g_67_776

seq1  GAATTCTCAGAGCTACTCTAAATACGTTGACTGTGAGAGATGCTCAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGCTACTCTAAATACGTTGACTGTGAGAGATGCTCAGTCA  50

seq1  CATTGCTACCAAGCGGGGCTCTCCACTACATCACCGTGAGCTAGTGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTACCAAGCGGGGCTCTCCACTACATCACCGTGAGCTAGTGTATT  100

seq1  TGACTGATAGGGTGAAAAGGGTATTTAGTGTAGCCAGTAGATTAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATAGGGTGAAAAGGGTATTTAGTGTAGCCAGTAGATTAAAAAAA  150

seq1  ATTACAAACAAACAAACAAAACCTTTTTCCTGAGATTATGAAAGATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAACAAACAAACAAAACCTTTTTCCTGAGATTATGAAAGATTTTA  200

seq1  ATTCAAATGTTGGAGGGGAGGACCACTAATTGAGACCCTCCCCCCACGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATGTTGGAGGGGAGGACCACTAATTGAGACCCTCCCCCCACGTC  250

seq1  CCTCCCCCCCCCCCAATTCTGAGCAGCCTCAGAGCAAAAGAGTGAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCCCCCCAATTCTGAGCAGCCTCAGAGCAAAAGAGTGAGCCTT  300

seq1  GCTTTAAGGGCACGGTATGCTGTGGCAACAGTGATGGATATGCTAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAGGGCACGGTATGCTGTGGCAACAGTGATGGATATGCTAATTTC  350

seq1  TTCATTCACTCCACTTCACTTCTTTTATTCTTTCCAATTAAAGCAAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCACTCCACTTCACTTCTTTTATTCTTTCCAATTAAAGCAAATGC  400

seq1  TACTGAAACCGTAATTAAGGCTGGGCTGGGCCCTGCCTGCCTGCTGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAACCGTAATTAAGGCTGGGCTGGGCCCTGCCTGCCTGCTGCTTT  450

seq1  AATGAAGCCCTATTGATTTTTCTTTTCTTTCTAATGGCCACACAGGGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCCCTATTGATTTTTCTTTTCTTTCTAATGGCCACACAGGGTTC  500

seq1  TCAATGGTCAAACATATGCCTGGCTACCATGTCCTGCTAAAACTTAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTCAAACATATGCCTGGCTACCATGTCCTGCTAAAACTTAATTT  550

seq1  TAGCCTAGCAAAAAAAAAAAAAATGGAGGCCCAGGAGAACGGGGTTACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAGCAAAAAAAAAAAAAATGGAGGCCCAGGAGAACGGGGTTACCA  600

seq1  GGACAATTTGTGGAAGGGGTGG-TTTGGAAGGCTCC-TTAGGTTTTTTTT  648
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  GGACAATTTGTGGAAGGGGTGGTTTTGGAAGGCTCCTTTAGGTTTTTTTT  650

seq1  TGGGGTGT-GTGTGTGACACATACCTACAAATGACTG-CCCATCAAGATG  696
      |||||||| ||||||||||||||||||| |||||||| |||||||||| |
seq2  TGGGGTGTGGTGTGTGACACATACCTAC-AATGACTGACCCATCAAGAGG  699

seq1  AAATGAGGGTG  707
      | |||||||||
seq2  ATATGAGGGTG  710