BAC Information

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BAC

Clone NameB6Ng01-282J05
Chromosome7 (Build37)
Map Location 110,059,027 - 110,194,461
singlet/doubletdoublet
Overlap geneOlfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582
Upstream gene2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571
Downstream geneOlfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282J05.bB6Ng01-282J05.g
ACCGA081756GA081757
length783548
definitionB6Ng01-282J05.b B6Ng01-282J05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,059,027 - 110,059,809)(110,193,908 - 110,194,461)
sequence
gaattcattatgttggccaactactcctgtacatgggggtctgacctgga
aaatagttgataaacccattgacatttcattggagaaaactgataaaaat
gacttttaacgacatatcgatacattagatattttcttaaatcatttatt
tctcagtgagcccttgggttcatgatcccttcttttccttaagtatatgt
cttagatttaacttcacagtatacttaggctatgtagggtgatcttgatt
ttaaaccaaggcaaaacactaggaagaagaaaccacagggaaatatgctt
gcagaaaggagcatagctgtcctctgagaggcttcacctagctgcttatg
gaaacagatgtagagacccacaccaaaacaggcagagcttggaatcttgt
gaaagagggagaaataggatgtaagaagccagaggggtcaagcacactat
aagaaaacccacagaagcaactaacctgggctcatagaggctcacagaga
ctgaaccaccaaccagagagcatgcatgggatggaactagattccctaca
catatgaaacagatgtgcaccttgttcttcatgtgggacctctaacaact
gcaacatgggctgtctctgactctgttgcctgtctttggatccctttccc
aggactgggctgtcttgtcaataggagaaaatgtacctggtcctactgca
acttgatatgctaaggcaagttgatatcagtggaaggcctccccttcgct
gaggagaaaggagggggtagagggaggtgagat
caggagaccataaagataaacaataaaatctgtgttattgctgctgttct
gagccaggctggaatgattgaatcaaaacattatattaaggaggaaaata
aggttgtgcctactgagcatctgtagctaccagagagacagagaagatga
aagaggcctagaatgagtgagtcaggtgtagagtttgattttatagactg
agaaccgactaaatggccaaccatagggtacattgaaaagcccctccctc
atgaatctagaaagtccagaatgaatttaagcattcatagaggtacttag
caaatgtcacatcaatgaataacaataaagtagaaaacttggggagggag
gaaataagtagaattaggtaataaggacatggagagagggagaaatatgc
atagaaagtcatcacaagtaactatgaagaatatgtcataaggaaactta
ctttgtataaaccaataaaattgagaagagacccaggattgggatacttt
ctatcctggaaaaacctagaggcaaatgtatgtggtgggtggtgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110059027_110059809
seq2: B6Ng01-282J05.b_48_830

seq1  GAATTCATTATGTTGGCCAACTACTCCTGTACATGGGGGTCTGACCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATGTTGGCCAACTACTCCTGTACATGGGGGTCTGACCTGGA  50

seq1  AAATAGTTGATAAACCCATTGACATTTCATTGGAGAAAACTGATAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTGATAAACCCATTGACATTTCATTGGAGAAAACTGATAAAAAT  100

seq1  GACTTTTAACGACATATCGATACATTAGATATTTTCTTAAATCATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTAACGACATATCGATACATTAGATATTTTCTTAAATCATTTATT  150

seq1  TCTCAGTGAGCCCTTGGGTTCATGATCCCTTCTTTTCCTTAAGTATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGAGCCCTTGGGTTCATGATCCCTTCTTTTCCTTAAGTATATGT  200

seq1  CTTAGATTTAACTTCACAGTATACTTAGGCTATGTAGGGTGATCTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATTTAACTTCACAGTATACTTAGGCTATGTAGGGTGATCTTGATT  250

seq1  TTAAACCAAGGCAAAACACTAGGAAGAAGAAACCACAGGGAAATATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAAGGCAAAACACTAGGAAGAAGAAACCACAGGGAAATATGCTT  300

seq1  GCAGAAAGGAGCATAGCTGTCCTCTGAGAGGCTTCACCTAGCTGCTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGGAGCATAGCTGTCCTCTGAGAGGCTTCACCTAGCTGCTTATG  350

seq1  GAAACAGATGTAGAGACCCACACCAAAACAGGCAGAGCTTGGAATCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGATGTAGAGACCCACACCAAAACAGGCAGAGCTTGGAATCTTGT  400

seq1  GAAAGAGGGAGAAATAGGATGTAAGAAGCCAGAGGGGTCAAGCACACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGGAGAAATAGGATGTAAGAAGCCAGAGGGGTCAAGCACACTAT  450

seq1  AAGAAAACCCACAGAAGCAACTAACCTGGGCTCATAGAGGCTCACAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACCCACAGAAGCAACTAACCTGGGCTCATAGAGGCTCACAGAGA  500

seq1  CTGAACCACCAACCAGAGAGCATGCATGGGATGGAACTAGATTCCCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCACCAACCAGAGAGCATGCATGGGATGGAACTAGATTCCCTACA  550

seq1  CATATGAAACAGATGTGCACCTTGTTCTTCATGTGGGACCTCTAACAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAACAGATGTGCACCTTGTTCTTCATGTGGGACCTCTAACAACT  600

seq1  GCAACATGGGCTGTCTCTGACTCTGTTGCCTGTCTTTGGATCCCTTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATGGGCTGTCTCTGACTCTGTTGCCTGTCTTTGGATCCCTTTCCC  650

seq1  AGGACTGGGCTGTCTTGTCAATAGGAGAAAATGTACCTGGTCCTACTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGGCTGTCTTGTCAATAGGAGAAAATGTACCTGGTCCTACTGCA  700

seq1  ACTTGATATGCTAAGGCAAGTTGATATCAGTGGAAGGCCTCCCCTTCGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATATGCTAAGGCAAGTTGATATCAGTGGAAGGCCTCCCCTTCGCT  750

seq1  GAGGAGAAAGGAGGGGGTAGAGGGAGGTGAGAT  783
      |||||||||||||||||||||||||||||||||
seq2  GAGGAGAAAGGAGGGGGTAGAGGGAGGTGAGAT  783

seq1: chr7_110193908_110194461
seq2: B6Ng01-282J05.g_66_619 (reverse)

seq1  ACTTCACCACCCACCACATACATTTGCCTCTAGGTTTTTCCAGGATAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACCACCCACCACATACATTTGCCTCTAGGTTTTTCCAGGATAGAA  50

seq1  AGTATCCCAATCCTGGGTCTCTTCTCAATTTTATTGGTTTATACAAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCCAATCCTGGGTCTCTTCTCAATTTTATTGGTTTATACAAAGTA  100

seq1  AGTTTCCTTATGACATATTCTTCATAGTTACTTGTGATGACTTTCTATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTTATGACATATTCTTCATAGTTACTTGTGATGACTTTCTATGC  150

seq1  ATATTTCTCCCTCTCTCCATGTCCTTATTACCTAATTCTACTTATTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTCCCTCTCTCCATGTCCTTATTACCTAATTCTACTTATTTCCT  200

seq1  CCCTCCCCAAGTTTTCTACTTTATTGTTATTCATTGATGTGACATTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCAAGTTTTCTACTTTATTGTTATTCATTGATGTGACATTTGCT  250

seq1  AAGTACCTCTATGAATGCTTAAATTCATTCTGGACTTTCTAGATTCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCTCTATGAATGCTTAAATTCATTCTGGACTTTCTAGATTCATGA  300

seq1  GGGAGGGGCTTTTCAATGTACCCTATGGTTGGCCATTTAGTCGGTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGCTTTTCAATGTACCCTATGGTTGGCCATTTAGTCGGTTCTCA  350

seq1  GTCTATAAAATCAAACTCTACACCTGACTCACTCATTCTAGGCCTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATAAAATCAAACTCTACACCTGACTCACTCATTCTAGGCCTCTTTC  400

seq1  ATCTTCTCTGTCTCTCTGGTAGCTACAGATGCTCAGTAGGCACAACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTCTGTCTCTCTGGTAGCTACAGATGCTCAGTAGGCACAACCTTA  450

seq1  TTTTCCTCCTTAATATAATGTTTTGATTCAATCATTCCAGCCTGGCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCCTTAATATAATGTTTTGATTCAATCATTCCAGCCTGGCTCAG  500

seq1  AACAGCAGCAATAACACAGATTTTATTGTTTATCTTTATGGTCTCCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGCAATAACACAGATTTTATTGTTTATCTTTATGGTCTCCTGGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554