BAC Information

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BAC

Clone NameB6Ng01-282J12
Chromosome7 (Build37)
Map Location 100,756,853 - 100,779,559
singlet/doubletdoublet
Overlap genenone
Upstream geneAnkrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
Downstream geneEG638305, EG545982
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282J12.bB6Ng01-282J12.g
ACCGA081770GA081771
length5111,031
definitionB6Ng01-282J12.b B6Ng01-282J12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,779,049 - 100,779,559)(100,756,853 - 100,757,876)
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tactcaaaaggaaaattaggaaattcagttcaaaattagcaaaatactta
aacaggcatatatatatatatatatatatatatatatatatatatatata
tatatatatatataacaaaaaggctttttagtatcaaataaacccaagaa
aatatggacaagagagaaatacaaatgaatgtttcagtggaacccctgta
catctgcagtagagcttctgtagtgagagctgtgctgagcacagagaatc
tttagcaactgaaacactcagtgtcgacaggagcatacacttcaacttca
acagagtctggaaaacattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgt

gaattcacttaagtgctgcttgcccttttccctgtgaataactgctcagt
tgtttcccgagtttgattaaggttacagtaataatcgtctcctatttcta
attaagttgaaactacatgtaagaatttaacttggtagcaggaggttcta
gcttgtatttcttttgtaagctagagactttctaatattttgggcacatt
ttatatgtgaaataatttaaataaatttatgaataagacataatttcttt
tatcatcatggttaatcagaaattattattatatctttatgtaaataatg
aaaagaattctttacagatattttgagaaaaatcacatatccacacaaat
gaatggtagcaaataaagtattcaatacataggatttgcaattatggtcc
ccttgttctctatgtacatgagaacataaaactaataatatttatatgca
ctggtaaagattttatacatattatttaattgaacataacacacaattct
tttaatgtggatttataatatgtatctatttaattcaactgaaaatcact
agcatttctgagtaatagatactagtatagaaattaagacacaaggataa
cacatcatttcttttatccttgagaacatgttttagttacacaatggata
gacatagagaagcatttgttttttcagtgtttatgactcagtgtggtagt
gttttcatcgataggccttctgtcaggttgtggatggtaaccaggagcat
tggcaataccatataaatcttgggggggtctatggaacctcattgaccaa
agacctccgaaagagaaaaccccttcctggattcaggctatttctttgat
agtgtatatctgggttgaagtattcttctctcattataaggtaactcaat
ttaaattctttttacatacatacatgtatgtaatttaggaatcttctata
gtagtaggttttcatatagattttcaaaggaacttagttgtagatatccc
tccccatagtccctcctcttactctacctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100779049_100779559
seq2: B6Ng01-282J12.b_51_561 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACAATGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACAATGTTTT  50

seq1  CCAGACTCTGTTGAAGTTGAAGTGTATGCTCCTGTCGACACTGAGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTCTGTTGAAGTTGAAGTGTATGCTCCTGTCGACACTGAGTGTTT  100

seq1  CAGTTGCTAAAGATTCTCTGTGCTCAGCACAGCTCTCACTACAGAAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTAAAGATTCTCTGTGCTCAGCACAGCTCTCACTACAGAAGCTC  150

seq1  TACTGCAGATGTACAGGGGTTCCACTGAAACATTCATTTGTATTTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGATGTACAGGGGTTCCACTGAAACATTCATTTGTATTTCTCTC  200

seq1  TTGTCCATATTTTCTTGGGTTTATTTGATACTTAAATGCCTTTTTGTTAT  250
      |||||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  TTGTCCATATTTTCTTGGGTTTATTTGATACTAAAAAGCCTTTTTGTTAT  250

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  300

seq1  ATATGCCTGTTTAAGTATTTTGCTAATTTTGAACTGAATTTCCTAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCTGTTTAAGTATTTTGCTAATTTTGAACTGAATTTCCTAATTTT  350

seq1  CCTTTTGAGTACTATGTTGAAAAGGTAGGGAGAAAGTGGGCAGCCTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGAGTACTATGTTGAAAAGGTAGGGAGAAAGTGGGCAGCCTTGTC  400

seq1  TAGTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTCTCCATTTACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTCTCCATTTACTTTG  450

seq1  ATGTTGGCTACTGGTTTGCTGTAGATTGCTTTTATCATGTTTAGGTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGCTACTGGTTTGCTGTAGATTGCTTTTATCATGTTTAGGTATGG  500

seq1  GCCTTGAATTC  511
      |||||||||||
seq2  GCCTTGAATTC  511


seq1: chr7_100756853_100757876
seq2: B6Ng01-282J12.g_65_1095

seq1  GAATTCACTTAAGTGCTGCTTGCCCTTTTCCCTGTGAATAACTGCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAGTGCTGCTTGCCCTTTTCCCTGTGAATAACTGCTCAGT  50

seq1  TGTTTCCCGAGTTTGATTAAGGTTACAGTAATAATCGTCTCCTATTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCCGAGTTTGATTAAGGTTACAGTAATAATCGTCTCCTATTTCTA  100

seq1  ATTAAGTTGAAACTACATGTAAGAATTTAACTTGGTAGCAGGAGGTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTGAAACTACATGTAAGAATTTAACTTGGTAGCAGGAGGTTCTA  150

seq1  GCTTGTATTTCTTTTGTAAGCTAGAGACTTTCTAATATTTTGGGCACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTATTTCTTTTGTAAGCTAGAGACTTTCTAATATTTTGGGCACATT  200

seq1  TTATATGTGAAATAATTTAAATAAATTTATGAATAAGACATAATTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTGAAATAATTTAAATAAATTTATGAATAAGACATAATTTCTTT  250

seq1  TATCATCATGGTTAATCAGAAATTATTATTATATCTTTATGTAAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCATGGTTAATCAGAAATTATTATTATATCTTTATGTAAATAATG  300

seq1  AAAAGAATTCTTTACAGATATTTTGAGAAAAATCACATATCCACACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTCTTTACAGATATTTTGAGAAAAATCACATATCCACACAAAT  350

seq1  GAATGGTAGCAAATAAAGTATTCAATACATAGGATTTGCAATTATGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTAGCAAATAAAGTATTCAATACATAGGATTTGCAATTATGGTCC  400

seq1  CCTTGTTCTCTATGTACATGAGAACATAAAACTAATAATATTTATATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCTCTATGTACATGAGAACATAAAACTAATAATATTTATATGCA  450

seq1  CTGGTAAAGATTTTATACATATTATTTAATTGAACATAACACACAATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAAGATTTTATACATATTATTTAATTGAACATAACACACAATTCT  500

seq1  TTTAATGTGGATTTATAATATGTATCTATTTAATTCAACTGAAAATCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTGGATTTATAATATGTATCTATTTAATTCAACTGAAAATCACT  550

seq1  AGCATTTCTGAGTAATAGATACTAGTATAGAAATTAAGACACAAGGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCTGAGTAATAGATACTAGTATAGAAATTAAGACACAAGGATAA  600

seq1  CACATCATTTCTTTTATCCTTGAGAACATGTTTTAGTTACACAATGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATTTCTTTTATCCTTGAGAACATGTTTTAGTTACACAATGGATA  650

seq1  GACATAGAGAAGCATTTGTTTTTTCAGTGTTTATGACTCAGTGTGGTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGAGAAGCATTTGTTTTTTCAGTGTTTATGACTCAGTGTGGTAGT  700

seq1  GTTTTCATCGATAGGCCTTCTGTCAGGTTGTGGATGGTAACCAGGAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATCGATAGGCCTTCTGTCAGGTTGTGGATGGTAACCAGGAGCAT  750

seq1  TGGCAATACCATATAAATCTT-GGGGGGTCTATGGAACCTCATTGACCAA  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGGCAATACCATATAAATCTTGGGGGGGTCTATGGAACCTCATTGACCAA  800

seq1  AGACCTCCGAAAGAGAAAACCCCTTCCTGGATTCAGGCTATTTCTTTGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCCGAAAGAGAAAACCCCTTCCTGGATTCAGGCTATTTCTTTGAT  850

seq1  AGTGTATATCT-GGTTGAAGTATTCTTCTCTCATTATAAGGTAACTCAAT  898
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATATCTGGGTTGAAGTATTCTTCTCTCATTATAAGGTAACTCAAT  900

seq1  TTAAATTCTTTTTACATACATACATGTATGTAATTTAGGAATCTTCTATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCTTTTTACATACATACATGTATGTAATTTAGGAATCTTCTATA  950

seq1  GTAGTAGGTTTTCATATAGATTTTCAAAGAACTTTAGTGTTAGATATCCC  998
      ||||||||||||||||||||||||||||| |  |||||  ||||||||||
seq2  GTAGTAGGTTTTCATATAGATTTTCAAAGGAACTTAGTTGTAGATATCCC  1000

seq1  TCCCCATAGTCCCTCCTC-----CTACCTCT  1024
      ||||||||||||||||||     ||||||||
seq2  TCCCCATAGTCCCTCCTCTTACTCTACCTCT  1031


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