BAC Information

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BAC

Clone NameB6Ng01-282K19
Chromosome7 (Build37)
Map Location 4,995,165 - 4,996,025
singlet/doubletsinglet
Overlap genenone
Upstream geneLair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784
Downstream geneZfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282K19.bB6Ng01-282K19.g
ACCGA081830GA081831
length1,197862
definitionB6Ng01-282K19.b B6Ng01-282K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggaaaagaatcaggtgtagggagattcaccaatgagatacaga
agaagtctgattatgaaactgtggagaggtaatgtgccctgtggcagaac
atagatcagtataaaaggaataagtgaattatgagccagtgtaaataagc
ctatcttaaggtctaggcactataactctctgggtcattatttgggagct
gaggtgggcataaaatgcccaaggttacatctggtgtctaatataagggc
tcataaaatccaagattagagcctgggaaagccacgggtggaaaggcagg
gaggaaacatttcctatgaactagagtctcctttagattgcatattgtac
aacaaagctggctgcagaggagaaacagggaactgaagtctcaggcatgt
gtcatgacacagaacctctgggtcgctttgtctgcatggacagggtctct
gggtgcagatgggcaaggagttggcgggaatgacagacagatgcacacag
gagattgtgtagaaatctgaatgtgttttgtcaggtctagcatcaaactt
tttatacagcagaatagcaagaaaccagacaagatacaatccaccaagtt
tcagtaacacaatacaaaaggaatgtatacatcaaaagaaggtggggacc
aggttgctgccactaagaagggagccaggtggaaagctagtctattgtta
agcccacaaacaggggttctactttagcagactttctcatgaatactgca
ataccacaactcccctatttcctgggccctgataatttctagtatgagag
taacttttaagtatctgcgtagaatctccatttgtcagaagaattcacca
acttgcttttaatatgcaatgtagtctgtactgaagatttctatctcagt
ggattccctggctctttcatggtattcccttgtttgggtgagatttgcta
ctgtccttagtaaatactctgcagaccaactcctgagctgctggtctgtc
tctgtaatgctatagttactgaataggtacttccttactgcattcataac
ggattccaactcgttccctttggcacatgggaaccacttggtggaaggcc
ttacctatgttcgaattcatctcttaaggcctgtataagtatatctacag
agaagccgcagtgggatccctatacacccttgtgaccgtactggacg
gaattccagcatgaccagggctacacagaggaaccctgtctggaaacaaa
acaaaaccctgaacgccatccccagcccccacaaggagggaaaaagaaga
gtttgtcagatgccctagaacctcagccctatgagctgccacctggatgc
tgggaactggacccaggtcatctgaatgacaagcacggggtcttaaatgg
ctgggccatctcccaagcccccttagtttgattgtttttaataaatcact
ggtgtcagggaacctgtagacagatttaaaaattggacatacgtataggc
attcatgcaggcaaaccacccagacatctaaaataagaggataattaaaa
agctgggcacagtagtgcagatatttaatcccagcattcagcagtcacag
ggatgtagatctcttagtttgaggtcagcctggtctacatagtaagtttt
aggacaactaggaggactatgtagtgagaccatgcctcaaaaataaaaga
tttactattgaaggtagtggtaaactactttttttggcttacattttctt
atcaactatttatcccagctcattctttctttgtctctgtttctctgtct
ctgtctctgtctctgtctctgtctctgtctctccccgtgtatgtgtctgt
atggaggggggagggcggttagagacagaacctacggccttccacatact
agggaagtattctaccttacaactgcactcctacctggatgtactatttc
tactgaaaacatttatggctcttaacctctgagccagtggtttcaacttc
acaaatactatggacgctatcatacatagcacacctcatattggagagag
aagtggttctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4995165_4996025
seq2: B6Ng01-282K19.g_65_926

seq1  GAATTCCAGCATGACCAGGGCTACACAGAGGAACCCTGTCTGGAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATGACCAGGGCTACACAGAGGAACCCTGTCTGGAAACAAA  50

seq1  ACAAAACCCTGAACGCCATCCCCAGCCCCCACAAGGAGGGAAAAAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCCTGAACGCCATCCCCAGCCCCCACAAGGAGGGAAAAAGAAGA  100

seq1  GTTTGTCAGATGCCCTAGAACCTCAGCCCTATGAGCTGCCACCTGGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCAGATGCCCTAGAACCTCAGCCCTATGAGCTGCCACCTGGATGC  150

seq1  TGGGAACTGGACCCAGGTCATCTGAATGACAAGCACGGGGTCTTAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTGGACCCAGGTCATCTGAATGACAAGCACGGGGTCTTAAATGG  200

seq1  CTGGGCCATCTCCCAAGCCCCCTTAGTTTGATTGTTTTTAATAAATCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCATCTCCCAAGCCCCCTTAGTTTGATTGTTTTTAATAAATCACT  250

seq1  GGTGTCAGGGAACCTGTAGACAGATTTAAAAATTGGACATACGTATAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGGGAACCTGTAGACAGATTTAAAAATTGGACATACGTATAGGC  300

seq1  ATTCATGCAGGCAAACCACCCAGACATCTAAAATAAGAGGATAATTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCAGGCAAACCACCCAGACATCTAAAATAAGAGGATAATTAAAA  350

seq1  AGCTGGGCACAGTAGTGCAGATATTTAATCCCAGCATTCAGCAGTCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGCACAGTAGTGCAGATATTTAATCCCAGCATTCAGCAGTCACAG  400

seq1  GGATGTAGATCTCTTAGTTTGAGGTCAGCCTGGTCTACATAGTAAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAGATCTCTTAGTTTGAGGTCAGCCTGGTCTACATAGTAAGTTTT  450

seq1  AGGACAACTAGGAGGACTATGTAGTGAGACCATGCCTCAAAAATAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACTAGGAGGACTATGTAGTGAGACCATGCCTCAAAAATAAAAGA  500

seq1  TTTACTATTGAAGGTAGTGGTAAACTACTTTTTTTGGCTTACATTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATTGAAGGTAGTGGTAAACTACTTTTTTTGGCTTACATTTTCTT  550

seq1  ATCAACTATTTATCCCAGCTCATTCTTTCTTTGTCTCTGTTTCTCTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTATTTATCCCAGCTCATTCTTTCTTTGTCTCTGTTTCTCTGTCT  600

seq1  CTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCCCCGTGTATGTGTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCCCCGTGTATGTGTCTGT  650

seq1  ATGGAGGGGGGAGGGCGGTTAGAGACAGAACCTACGGCCTTCCACATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGGGGAGGGCGGTTAGAGACAGAACCTACGGCCTTCCACATACT  700

seq1  AGGCAAGTATTCTACCATACAACTGCACTCCTAACCTGATGTACTATTTC  750
      ||| |||||||||||| |||||||||||||||| |  |||||||||||||
seq2  AGGGAAGTATTCTACCTTACAACTGCACTCCTACCTGGATGTACTATTTC  750

seq1  TACTGAAAACCATTAGTGCTCTTAACCTCTGAGCCAGTGGTTCTCAACTT  800
      ||||||||||  |||  ||||||||||||||||||||||||| |||||||
seq2  TACTGAAAACATTTATGGCTCTTAACCTCTGAGCCAGTGGTT-TCAACTT  799

seq1  TCCTAATACTA-GGACTCTTTCATACATACAGCTCCTCATATTGGAGAGA  849
        | ||||||| |||| || |||||||||   | ||||||||||||||||
seq2  CACAAATACTATGGACGCTATCATACATAGCACACCTCATATTGGAGAGA  849

seq1  GGAGTGG-TCTGT  861
      | ||||| |||||
seq2  GAAGTGGTTCTGT  862