BAC Information

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BAC

Clone NameB6Ng01-283B16
Chromosome7 (Build37)
Map Location 107,433,929 - 107,596,432
singlet/doubletdoublet
Overlap geneP4ha3, Ppme1, AU020772
Upstream geneMtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1
Downstream geneUcp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283B16.bB6Ng01-283B16.g
ACCGA082148GA082149
length965867
definitionB6Ng01-283B16.b B6Ng01-283B16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,595,841 - 107,596,432)(107,433,929 - 107,434,786)
sequence
gaattctctatccagctactttgttttaaaactgtgttatttaagcccct
ctaccagtattgggggatcaaacctagacagacaagtgcttctaatagaa
gcccatcagatgggatatttgcttcatatattggagttgtttatggttta
gttataaatctccattagatctatgttttgaatttattcttctatgtgtt
ttctttttactttctatttttagatttttttcaaaatttatttttatttt
attttattttatttgtttgtttgttttggtttttcaagacagggtttctc
tgtgtactttggctgtcctagaactcactctgtagaccaggctggcctcg
aactcagaaatccgcctgcctctgcctcccgagtgctgggattaaaggtg
tgcgtcaccaccgcccggctattttattttatatgtgtatgtgtatgtcg
tgtgtggtgccttggaggccagaggatgacaatggataaccgaggacttg
gagttacaaactgctgtgaaccctaagatgtgagtgctggcaggtgacct
tgggcccccaggagtcgctcttacctgctgagccatcttccaggcccttc
cctttcctgatgtcatcacacacagcactcaggtctttacttctaatcaa
acagttttttttttttttttctgcttgtacctttgtcgtcatatttaggg
aatcaataattcacaaaaatttacactgattatgttttctttgaagagtt
tcttggtttgctactatgttaactccaatttggggctattttgtgtatgg
cactaggaggggcttgaattcagcctgcactggggtgtcaagctgttgct
gctctgtttggaagtctgttccttttcctcattggacttgttcgggcaca
tctgctaaaattcagttcacatacttttaccgttgggaatattaatttta
tttcactggtctgta
gaattcagtgctgaggggacggaggcggccaagggcgggcgacggaaggc
tgcgggcgggcgggcgggccggggcggcgccgggcgagagcgcggaggga
cgcgcgaccctgcgatgggcccaggggcgcggctggctctgctggcgctg
ctggcgctcgggggagaccccgcggcggccacggggcgggaggacacgtt
ctccgcgctgaccagcgtggcgcgcgccctggcgcccgagcgcaggctgc
tggggacactgaggcgctacctgcgcggcgaggaggcgcggctgcgcgac
ttgaccaggtgagggcgtctccagggagccgggatgctcagcgactgagg
gtgaggagtaactgaggcccaaagtgacttccagacccaactgtcatgtg
gtggggaccctgagacactttgaaggggaatgaggagttctgtgtcactc
tctctctctctctctctctctctctctctctccctctctctcactctctg
tgtctgtctgtctgtctgtctgtgtctgtctctttgtctctgtgcctgtc
tctctgcctctttgtgtgtgtgtctctgtctctctgttccggtctctgtc
tctctctgtgtctatgtgtctgtatgtatgtgagtttgaccgtgtcgctg
tctctttttgtttctctgtctctccctgtctctctgtctctcactctctg
tctctgtcacacccatactcacacccccggggtgtgacaccaccccccat
ccacctccacatgtccaaattgatacactgagaacaagtgtaggatgcat
gtatattcctatattatcatttgtgatcttacaatacctgtgtcaaacca
gcaaatgaccttgtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107595841_107596432
seq2: B6Ng01-283B16.b_49_640 (reverse)

seq1  TGGAAGATGGCTCAGCAGGTAAGAGCGACTCCTGGGGGCCCAAGGTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATGGCTCAGCAGGTAAGAGCGACTCCTGGGGGCCCAAGGTCACC  50

seq1  TGCCAGCACTCACATCTTAGGGTTCACAGCAGTTTGTAACTCCAAGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCACTCACATCTTAGGGTTCACAGCAGTTTGTAACTCCAAGTCCT  100

seq1  CGGTTATCCATTGTCATCCTCTGGCCTCCAAGGCACCACACACGACATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTATCCATTGTCATCCTCTGGCCTCCAAGGCACCACACACGACATAC  150

seq1  ACATACACATATAAAATAAAATAGCCGGGCGGTGGTGACGCACACCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACATATAAAATAAAATAGCCGGGCGGTGGTGACGCACACCTTTA  200

seq1  ATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCA  250

seq1  GCCTGGTCTACAGAGTGAGTTCTAGGACAGCCAAAGTACACAGAGAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAGAGTGAGTTCTAGGACAGCCAAAGTACACAGAGAAACC  300

seq1  CTGTCTTGAAAAACCAAAACAAACAAACAAATAAAATAAAATAAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTGAAAAACCAAAACAAACAAACAAATAAAATAAAATAAAATAAA  350

seq1  AATAAATTTTGAAAAAAATCTAAAAATAGAAAGTAAAAAGAAAACACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTTGAAAAAAATCTAAAAATAGAAAGTAAAAAGAAAACACATA  400

seq1  GAAGAATAAATTCAAAACATAGATCTAATGGAGATTTATAACTAAACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATAAATTCAAAACATAGATCTAATGGAGATTTATAACTAAACCAT  450

seq1  AAACAACTCCAATATATGAAGCAAATATCCCATCTGATGGGCTTCTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTCCAATATATGAAGCAAATATCCCATCTGATGGGCTTCTATTA  500

seq1  GAAGCACTTGTCTGTCTAGGTTTGATCCCCCAATACTGGTAGAGGGGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTTGTCTGTCTAGGTTTGATCCCCCAATACTGGTAGAGGGGCTT  550

seq1  AAATAACACAGTTTTAAAACAAAGTAGCTGGATAGAGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACACAGTTTTAAAACAAAGTAGCTGGATAGAGAATTC  592

seq1: chr7_107433929_107434786
seq2: B6Ng01-283B16.g_67_929

seq1  GAATTCAGTGCTGAGGGGACGGAGGCGGCCAAGGGCGGGCGACGGAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCTGAGGGGACGGAGGCGGCCAAGGGCGGGCGACGGAAGGC  50

seq1  TGCGGGCGGGCGGGCGGGCCGGGGCGGCGCCGGGCGAGAGCGCGGAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGCGGGCGGGCGGGCCGGGGCGGCGCCGGGCGAGAGCGCGGAGGGA  100

seq1  CGCGCGACCCTGCGATGGGCCCAGGGGCGCGGCTGGCTCTGCTGGCGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGACCCTGCGATGGGCCCAGGGGCGCGGCTGGCTCTGCTGGCGCTG  150

seq1  CTGGCGCTCGGGGGAGACCCCGCGGCGGCCACGGGGCGGGAGGACACGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGCTCGGGGGAGACCCCGCGGCGGCCACGGGGCGGGAGGACACGTT  200

seq1  CTCCGCGCTGACCAGCGTGGCGCGCGCCCTGGCGCCCGAGCGCAGGCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCGCTGACCAGCGTGGCGCGCGCCCTGGCGCCCGAGCGCAGGCTGC  250

seq1  TGGGGACACTGAGGCGCTACCTGCGCGGCGAGGAGGCGCGGCTGCGCGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACACTGAGGCGCTACCTGCGCGGCGAGGAGGCGCGGCTGCGCGAC  300

seq1  TTGACCAGGTGAGGGCGTCTCCAGGGAGCCGGGATGCTCAGCGACTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGGTGAGGGCGTCTCCAGGGAGCCGGGATGCTCAGCGACTGAGG  350

seq1  GTGAGGAGTAACTGAGGCCCAAAGTGACTTCCAGACCCAACTGTCATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGTAACTGAGGCCCAAAGTGACTTCCAGACCCAACTGTCATGTG  400

seq1  GTGGGGACCCTGAGACACTTTGAAGGGGAATGAGGAGTTCTGTGTCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGACCCTGAGACACTTTGAAGGGGAATGAGGAGTTCTGTGTCACTC  450

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCACTCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCACTCTCTG  500

seq1  TGTCTGTCTGTCTGTCTGTCTGTGTCTGTCTCTTTGTCTCTGTGCCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTGTCTGTGTCTGTCTCTTTGTCTCTGTGCCTGTC  550

seq1  TCTCTGCCTCTTTGTGTGTGTGTCTCTGTCTCTCTGTTCCGGTCTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCTCTTTGTGTGTGTGTCTCTGTCTCTCTGTTCCGGTCTCTGTC  600

seq1  TCTCTCTGTGTCTATGTGTCTGTATGTATGTGTGTTTGTCCGTGTCTCTG  650
      |||||||||||||||||||||||||||||||| ||||| ||||||| |||
seq2  TCTCTCTGTGTCTATGTGTCTGTATGTATGTGAGTTTGACCGTGTCGCTG  650

seq1  TCTCTTTCTGTTTCTCTGTCTCTCCCTGTCTCTCTGTCTCTCACTCTCTG  700
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTGTTTCTCTGTCTCTCCCTGTCTCTCTGTCTCTCACTCTCTG  700

seq1  TCTCTGTCACACACAAACACACA-CCCCGGGGTGTGACACCACCCCCCAT  749
      |||||||||||| || || |||| ||||||||||||||||||||||||||
seq2  TCTCTGTCACACCCATACTCACACCCCCGGGGTGTGACACCACCCCCCAT  750

seq1  CCACCTTCACATGTCCAAGTTGATACACTGTGAAAAAGTGTAGGTAGCAT  799
      |||||| ||||||||||| ||||||||||| ||| |||||||||  ||||
seq2  CCACCTCCACATGTCCAAATTGATACACTGAGAACAAGTGTAGGATGCAT  800

seq1  GGAGATT-CTAGAGT-CCAGTTG-GATCTCACAAATACTGTGTC-AAGCA  845
      | | ||| ||| | |  || ||| ||||| ||||   ||||||| || ||
seq2  GTATATTCCTATATTATCATTTGTGATCTTACAATACCTGTGTCAAACCA  850

seq1  GCAAATGACCTTG  858
      |||||||||||||
seq2  GCAAATGACCTTG  863