BAC Information

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BAC

Clone NameB6Ng01-283E23
Chromosome7 (Build37)4 (Build37)
Map Location 133,552,826 - 133,553,580135,856,641 - 135,856,674
singlet/doubletsingletsinglet
Overlap geneCd19
Upstream geneLOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip
Downstream geneRabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283E23.bB6Ng01-283E23.g
ACCGA082305GA082306
length755102
definitionB6Ng01-283E23.b B6Ng01-283E23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(133,552,826 - 133,553,580)(135,856,641 - 135,856,674)
sequence
gaattccaggctagcctaggctgaagctttgtaacaaaaaatgtaacgaa
acacactcagccaaccgactgaagcattgacctcaataccttctctctta
gagtttggccttcacctcaccccagtttaaagtggacttcaaccttgacc
ccaactgtctgtatcatttcctgtgagcttgactttgactcctcccaatt
ctgttcttgacccttcctttggccttggccatcttagaaccaagtaggat
cttgatgctgacaaatcagtcctagtttgacattaggaacttcgacttct
tgcctagctcctctcccgtgggtaggcaggacttcccttcccccaagccc
cagcagaatttctgggtctctaatcttccatcccatgcctaaacagggtc
ccagtcctatgaagatatgagagggatcctctatgcagctcctcagctcc
actcaattcagtccggtcccagtcatgaagaaggtgggtgtttctgcact
gtttctcgttgtcctctggacacccccctccccctccctcccccactcta
ccccagcatccttttcatccaatttacactttccttttcctggtcttatc
cagatgcagactcttatgaaaacatggataagtctgacgacctagaacca
gcatgggaaggagagggccacatggggacttggggaaccacgtgactccc
aagtgactaggtgagctggacgctgcccctgggagaggggaggaagagag
ggata
caggacactcagggatacatagaaaaatcaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaggaggaggaggag
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133552826_133553580
seq2: B6Ng01-283E23.b_42_796 (reverse)

seq1  TATCCCTCTCTTCCTCCCCTCTCCCAGGGGCAGCGTCCAGCTCACCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTCTCTTCCTCCCCTCTCCCAGGGGCAGCGTCCAGCTCACCTAGT  50

seq1  CACTTGGGAGTCACGTGGTTCCCCAAGTCCCCATGTGGCCCTCTCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGGAGTCACGTGGTTCCCCAAGTCCCCATGTGGCCCTCTCCTTCC  100

seq1  CATGCTGGTTCTAGGTCGTCAGACTTATCCATGTTTTCATAAGAGTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGGTTCTAGGTCGTCAGACTTATCCATGTTTTCATAAGAGTCTGC  150

seq1  ATCTGGATAAGACCAGGAAAAGGAAAGTGTAAATTGGATGAAAAGGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGATAAGACCAGGAAAAGGAAAGTGTAAATTGGATGAAAAGGATGC  200

seq1  TGGGGTAGAGTGGGGGAGGGAGGGGGAGGGGGGTGTCCAGAGGACAACGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTAGAGTGGGGGAGGGAGGGGGAGGGGGGTGTCCAGAGGACAACGA  250

seq1  GAAACAGTGCAGAAACACCCACCTTCTTCATGACTGGGACCGGACTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTGCAGAAACACCCACCTTCTTCATGACTGGGACCGGACTGAAT  300

seq1  TGAGTGGAGCTGAGGAGCTGCATAGAGGATCCCTCTCATATCTTCATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGAGCTGAGGAGCTGCATAGAGGATCCCTCTCATATCTTCATAGG  350

seq1  ACTGGGACCCTGTTTAGGCATGGGATGGAAGATTAGAGACCCAGAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGACCCTGTTTAGGCATGGGATGGAAGATTAGAGACCCAGAAATTC  400

seq1  TGCTGGGGCTTGGGGGAAGGGAAGTCCTGCCTACCCACGGGAGAGGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGCTTGGGGGAAGGGAAGTCCTGCCTACCCACGGGAGAGGAGCT  450

seq1  AGGCAAGAAGTCGAAGTTCCTAATGTCAAACTAGGACTGATTTGTCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGAAGTCGAAGTTCCTAATGTCAAACTAGGACTGATTTGTCAGCA  500

seq1  TCAAGATCCTACTTGGTTCTAAGATGGCCAAGGCCAAAGGAAGGGTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATCCTACTTGGTTCTAAGATGGCCAAGGCCAAAGGAAGGGTCAAG  550

seq1  AACAGAATTGGGAGGAGTCAAAGTCAAGCTCACAGGAAATGATACAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATTGGGAGGAGTCAAAGTCAAGCTCACAGGAAATGATACAGACA  600

seq1  GTTGGGGTCAAGGTTGAAGTCCACTTTAAACTGGGGTGAGGTGAAGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGTCAAGGTTGAAGTCCACTTTAAACTGGGGTGAGGTGAAGGCCA  650

seq1  AACTCTAAGAGAGAAGGTATTGAGGTCAATGCTTCAGTCGGTTGGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAAGAGAGAAGGTATTGAGGTCAATGCTTCAGTCGGTTGGCTGAG  700

seq1  TGTGTTTCGTTACATTTTTTGTTACAAAGCTTCAGCCTAGGCTAGCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCGTTACATTTTTTGTTACAAAGCTTCAGCCTAGGCTAGCCTGG  750

seq1  AATTC  755
      |||||
seq2  AATTC  755

seq1: chr4_135856641_135856674
seq2: B6Ng01-283E23.g_140_173 (reverse)

seq1  TCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTT  34
      ||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTT  34