BAC Information

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BAC

Clone NameB6Ng01-283J10
Chromosome7 (Build37)
Map Location 11,724,816 - 11,725,776
singlet/doubletsinglet
Overlap geneLOC100042293
Upstream geneVmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997
Downstream geneZscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e, LOC665857, LOC665861, Zscan4f, LOC673742, LOC665887, LOC637541, LOC100042361, Zscan4-ps2, LOC675782, LOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283J10.bB6Ng01-283J10.g
ACCGA082513GA082514
length1,184992
definitionB6Ng01-283J10.b B6Ng01-283J10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtggtcatgatattaaattgaactaagggagtagtgcccttgt
agcaagaacctacctataaacaagggagatatataaacaagagagatata
aacaagggagatatatggagaaagaagaaacaggactgaataaatgtgtg
cagaaggatcctgtagcagcgtcgttcttcctggccagttgagcgcgcgc
aacagttggtgccgaaacccgggaaaagaaacatcttcaggcaagagcga
agaccccctgctacaggaaggattcagaactgcatcactgggaaggagtg
gctaataaaggttcccgtaaaacagactgttgagaaggatccggcgtgga
ttcagaacttttcagctggggaacggtactgatgaagagaaagaagaaag
atgaagactgaataaactgctgttagaaggactggtggtcgtgtcgttct
tgctggtcgagagcgggcgcgacaattggtggcccgtacggggaaccgac
tcccccaccgagttcagaactttcagcagtcagtggttgccggcagggta
agttcatggtgagtgaaacttgcaaccccaggagtttgggaaggacctcg
gataaaatagaggtgagcataaagttgccaggaagtaggcacaaagtaac
ccaggagtttgggaaggacctccgataaaatagaggcgaatataacgttg
ccaggaagcaggtacaaggtaactaaaggttcatggctttgggacaagtt
aaggttcacggtttcagatagattaaggaagtatgataacctcagtgtag
tgatcaagagatcctcgctgtgtagttatgcttttttctcccattgaccc
tttgtgggtaggtctgatagttttggtcttgtttgttctgatatatggac
tctgttactgtttgaatcgagagacagtcaagacaggtcagaaaatcctt
atagagcaacaagaaagtatgtcggagagagacggctttaaaagaaaagg
aaaagaaagagacacagtaaatcagtgaacagaaaggacaaataaagagc
cgagtgaggagagcgatagctctgtgcctctcctattgcctcctcagcag
cacctgtaagtgcaccttcgttcttggaatgtagaggatccgagttgaat
caggtgtgttgaacgctggggctagaagaaggct
gaattccaaacccatcaggaagggagtcgatgtggaatccgaccccgcca
ggaaatagcgtttggctggttgtacaagtctaggcatggacaagtgtgct
tagagatactggtgtcttccttttctctgttgctatcttgtttttgtttg
tggtttttgtcatgagacacagacactgtacgttggaggtaaagtgggat
ccctccctgtctgtatgtctgtgtgtctgtgtgtcttgttcacttgtgtg
tcctccattggaccgccttctgattctgttttgttttgggtttgtctggt
ttcaagtctggttttggtcccaaggagttgactgattatcttggtttggt
tttaggccggtctcaggttctggggccttcccatggagagaggtccattt
gggttggtcatagtgacagtaagcttctctggaaatcacgtgtaagatgc
cctgtattggtcttgcttgtgtttgtcatttctgtggtactgtgattcta
tagtggttgcctgaaaacggtttctgtgtgtgtcttgtgtgtctctttgt
gttcggacttggactaatgactgacgactgtttttgagttatgccctctg
gaataagcctaagaatcctgtcagatccctatgctgaccacttcctttca
gatcctcagctgccctgcctcccactccaactccagggagcagccagtgg
gtcacagtggtcccgcccatggacctggagcctaggggtaaatgagctcg
gaaaatccggagcaaatgaggagtggtccctgaatagtcagtggccctag
atgtcgtgactgctaaagagaaaaagaggaggaggctgtgggagtagctg
gccaagagctctgcaggtttccctgattgcttctcattcccctgtccctt
gcatccatctcttgtaacagaaaaactgctttcactttaagataagtgcc
ggttgcagccagctgtgagagctgcactcccttctctgctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_11724816_11725776
seq2: B6Ng01-283J10.g_60_1018

seq1  GAATTCCAAACCCATCAGGAAGGGAGTCGATGTGGAATCCGACCCCGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCCATCAGGAAGGGAGTCGATGTGGAATCCGACCCCGCCA  50

seq1  GGAAATAGCGTTTGGCTGGTTGTACAAGTCTAGGCATGGACAAGTGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGCGTTTGGCTGGTTGTACAAGTCTAGGCATGGACAAGTGTGCT  100

seq1  TAGAGATACTGGTGTCTTCCTTTTCTCTGTTGCTATCTTGTTTTTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATACTGGTGTCTTCCTTTTCTCTGTTGCTATCTTGTTTTTGTTTG  150

seq1  TGGTTTTTGTCATGAGACACAGACACTGTACGTTGGAGGTAAAGTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGTCATGAGACACAGACACTGTACGTTGGAGGTAAAGTGGGAT  200

seq1  CCCTCCCTGTCTGTATGTCTGTGTGTCTGTGTGTCTTGTTCACTTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTGTCTGTATGTCTGTGTGTCTGTGTGTCTTGTTCACTTGTGTG  250

seq1  TCCTCCATTGGACCGCCTTCTGATTCTGTTTTGTTTTGGGTTTGTCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATTGGACCGCCTTCTGATTCTGTTTTGTTTTGGGTTTGTCTGGT  300

seq1  TTCAAGTCTGGTTTTGGTCCCAAGGAGTTGACTGATTATCTTGGTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTCTGGTTTTGGTCCCAAGGAGTTGACTGATTATCTTGGTTTGGT  350

seq1  TTTAGGCCGGTCTCAGGTTCTGGGGCCTTCCCATGGAGAGAGGTCCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCCGGTCTCAGGTTCTGGGGCCTTCCCATGGAGAGAGGTCCATTT  400

seq1  GGGTTGGTCATAGTGACAGTAAGCTTCTCTGGAAATCACGTGTAAGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGTCATAGTGACAGTAAGCTTCTCTGGAAATCACGTGTAAGATGC  450

seq1  CCTGTATTGGTCTTGCTTGTGTTTGTCATTTCTGTGGTACTGTGATTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTGGTCTTGCTTGTGTTTGTCATTTCTGTGGTACTGTGATTCTA  500

seq1  TAGTGGTTGCCTGAAAACGGTTTCTGTGTGTGTCTTGTGTGTCTCTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTTGCCTGAAAACGGTTTCTGTGTGTGTCTTGTGTGTCTCTTTGT  550

seq1  GTTCGGACTTGGACTAATGACTGACGACTGTTTTTGAGTTATGCCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGGACTTGGACTAATGACTGACGACTGTTTTTGAGTTATGCCCTCTG  600

seq1  GAATAAGCCTAAGAATCCTGTCAGATCCCTATGCTGACCACTTCCTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGCCTAAGAATCCTGTCAGATCCCTATGCTGACCACTTCCTTTCA  650

seq1  GATCCTCAGCTGCCCTGCCTCCCACTCCAACTCCAGGGAGCAGCCAGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCAGCTGCCCTGCCTCCCACTCCAACTCCAGGGAGCAGCCAGTGG  700

seq1  GTCACAGTGGTCCCGCCCATGGACCTGGAGCCTAGGGGTAAATGAGCTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTGGTCCCGCCCATGGACCTGGAGCCTAGGGGTAAATGAGCTCG  750

seq1  GAAAATCCGGAGCAAATGAGGAGTGGTCCCTGAATAGTCAGTGGCCCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCGGAGCAAATGAGGAGTGGTCCCTGAATAGTCAGTGGCCCTAG  800

seq1  ATGTCGTGACTGCTAAAGAGAAAAAGAGGAGGAGGCTGTGGGAGTAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCGTGACTGCTAAAGAGAAAAAGAGGAGGAGGCTGTGGGAGTAGCTG  850

seq1  GCCAAGAGCTCTGCAGGTTTCCCTGATTGCTTCTCATTCCCCTGTCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGCTCTGCAGGTTTCCCTGATTGCTTCTCATTCCCCTGTCCCTT  900

seq1  GCATCCCATCTCTTGTTAACAGAAAAACTGCTTTCACTTTAAGATAAGTG  950
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCAT-CCATCTCTTG-TAACAGAAAAACTGCTTTCACTTTAAGATAAGTG  948

seq1  CCGGTTGCAGC  961
      |||||||||||
seq2  CCGGTTGCAGC  959