BAC Information

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BAC

Clone NameB6Ng01-283K20
Chromosome7 (Build37)7 (Build37)
Map Location 14,538,616 - 14,538,77314,073,317 - 14,074,200
singlet/doubletsingletsinglet
Overlap geneEG434121
Upstream gene1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627
Downstream geneEG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283K20.bB6Ng01-283K20.g
ACCGA082577GA082578
length431881
definitionB6Ng01-283K20.b B6Ng01-283K20.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,538,616 - 14,538,773)(14,073,317 - 14,074,200)
sequence
tgattggatgaggtggagtagagctagaaggaaatgagttgccatgagta
gtgagttgtttttagcccttgccctaggtagaagccagaagtagaataag
agtagttttagctcttgccaaacttcttcttgtagaagtagagtaagaga
agttgttgtaataggagtagtttagaccttgccctaagaagaagctgttg
gggaagatagctgtgaaaggaaaagcccgaagcaaagttgctgcgtgaac
ctgacttggtgtctgtgttgttcatgttgcagctggctctgaggaccaac
aacaagatagggggctaatatccaatatatataaagaactcaagaagttt
tactacctctcctttctactttcattttcctgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgcgcgc
gaattcaatatagaaccaattgccactaggaaagtgacgttatctagaga
cacaaatggcaaatgtcaaagagttaaagcagtcagctgctgtgatgcag
aaggctgagaataatgaatgagaaaggcaattctatactccaatatttat
ctaattatgaatcatatgagacttttaaaaaaacgtcttgctcctaacca
gtagaagagacaaaaatctataaggagatcccagtgaagggatttgccac
acatatatgaattcagaggtcactgtggacaatcaccagaccaggtagtg
ttggacttttctgagcatgaaaattcaaaatatcttcatgagaaccttcc
tgttacccagagaaacttgagatgaaagaagagaggcagtttgactactc
aaggatctccagagagaagcctgatcatgagtccttctttggaagggtct
gccttttgaaagctgtacatagatgctttatcctgaattcagcagtttca
gtcttagctaacattcatattctatttcagtcttgttcatgtgtatgtct
gtgcctctgttactagcattgactatggggatctcttggaagctagaggt
ttctagcactgggttatatcctcaaggcttcatctcagtctttcagaagg
gaatacttcctgaatgtgaatgcccgtctttacctaggccattcagtgac
agaaactaaagggtgacaccctacatcaaagacaaagaaaatttctggat
actcctattgcttcctaaagtcttttagcattgtgtccttggtaccagaa
gtggtgggggtatcctgtgacaccttgccatgctttgggggaggactgtg
aagacttgactttgagcttacaagaatccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14538616_14538773
seq2: B6Ng01-283K20.b_353_479

seq1  AGATAGGGGGCTATTATCTAATATATATAAAGAACTCAGGAAGTTGTACT  50
      ||||||||||||| |||| ||||||||||||||||||| |||||| ||||
seq2  AGATAGGGGGCTAATATCCAATATATATAAAGAACTCAAGAAGTTTTACT  50

seq1  ACCTCTCCTTTCTACTTTCATATTCCCTCTCTCTCTCTCTCTCTCTCTCT  100
      ||||||||||||||||||||| |||                         
seq2  ACCTCTCCTTTCTACTTTCATTTTC-------------------------  75

seq1  CTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150
            ||||||||||||||||||||||||||||||||||||||||||||
seq2  ------CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  119

seq1  GTGTGCGC  158
      ||| ||||
seq2  GTGCGCGC  127

seq1: chr7_14073317_14074200
seq2: B6Ng01-283K20.g_67_947

seq1  GAATTCAATATAGAACCAATTGCCACTAGGAAAGTGACGTTATCTAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATAGAACCAATTGCCACTAGGAAAGTGACGTTATCTAGAGA  50

seq1  CACAAATGGCAAATGTCAAAGAGTTAAAGCAGTCAGCTGCTGTGATGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGGCAAATGTCAAAGAGTTAAAGCAGTCAGCTGCTGTGATGCAG  100

seq1  AAGGCTGAGAATAATGAATGAGAAAGGCAATTCTATACTCCAATATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAGAATAATGAATGAGAAAGGCAATTCTATACTCCAATATTTAT  150

seq1  CTAATTATGAATCATATGAGACTTTTAAAAAAACGTCTTGCTCCTAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATGAATCATATGAGACTTTTAAAAAAACGTCTTGCTCCTAACCA  200

seq1  GTAGAAGAGACAAAAATCTATAAGGAGATCCCAGTGAAGGGATTTGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGAGACAAAAATCTATAAGGAGATCCCAGTGAAGGGATTTGCCAC  250

seq1  ACATATATGAATTCAGAGGTCACTGTGGACAATCACCAGACCAGGTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATGAATTCAGAGGTCACTGTGGACAATCACCAGACCAGGTAGTG  300

seq1  TTGGACTTTTCTGAGCATGAAAATTCAAAATATCTTCATGAGAACCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTTTCTGAGCATGAAAATTCAAAATATCTTCATGAGAACCTTCC  350

seq1  TGTTACCCAGAGAAACTTGAGATGAAAGAAGAGAGGCAGTTTGACTACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCCAGAGAAACTTGAGATGAAAGAAGAGAGGCAGTTTGACTACTC  400

seq1  AAGGATCTCCAGAGAGAAGCCTGATCATGAGTCCTTCTTTGGAAGGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCTCCAGAGAGAAGCCTGATCATGAGTCCTTCTTTGGAAGGGTCT  450

seq1  GCCTTTTGAAAGCTGTACATAGATGCTTTATCCTGAATTCAGCAGTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTGAAAGCTGTACATAGATGCTTTATCCTGAATTCAGCAGTTTCA  500

seq1  GTCTTAGCTAACATTCATATTCTATTTCAGTCTTGTTCATGTGTATGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGCTAACATTCATATTCTATTTCAGTCTTGTTCATGTGTATGTCT  550

seq1  GTGCCTCTGTTACTAGCATTGACTATGGGGATCTCTTGGAAGCTAGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTGTTACTAGCATTGACTATGGGGATCTCTTGGAAGCTAGAGGT  600

seq1  TTCTAGCACTGGGTTATATCCTCAAGGCTTCATCTCAGTCTTTCAGAAGG  650
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCTAGCACTGGGTTATATCCTCAAGGCTTCATCTCAGTCTTTCAGAA-G  649

seq1  GGAATACTTCCTGAATGTGAATGCCCGTCTTTACCTAGGGCCATTCAGTG  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGAATACTTCCTGAATGTGAATGCCCGTCTTTACCTA-GGCCATTCAGTG  698

seq1  ACAGAAACTAAGGGGTGACACCCTACATCAAAGACAAAGAAAATTTCTGG  750
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACTAAAGGGTGACACCCTACATCAAAGACAAAGAAAATTTCTGG  748

seq1  ATACTCCTATTGCTTCCTAAAGTCTTTTAGCA-TGTGTCCTTGGTACCAG  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATACTCCTATTGCTTCCTAAAGTCTTTTAGCATTGTGTCCTTGGTACCAG  798

seq1  AAGT-GTGGGGTATTCCTGTGACAACCTGGCCATGCTTT-GGGGAGGACT  847
      |||| ||||||   ||||||||| |||| |||||||||| ||||||||||
seq2  AAGTGGTGGGGGTATCCTGTGAC-ACCTTGCCATGCTTTGGGGGAGGACT  847

seq1  GTGGAAGGACTTTGGAACTTTGAGC-TACAAG-ATCCAT  884
      |||  | |||||    ||||||||| |||||| ||||||
seq2  GTG--AAGACTT---GACTTTGAGCTTACAAGAATCCAT  881