BAC Information

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BAC

Clone NameB6Ng01-283K22
Chromosome7 (Build37)
Map Location 111,335,762 - 111,454,744
singlet/doubletdoublet
Overlap geneOlfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12
Upstream geneOlfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648
Downstream geneTrim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283K22.bB6Ng01-283K22.g
ACCGA082581GA082582
length959741
definitionB6Ng01-283K22.b B6Ng01-283K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,335,762 - 111,336,720)(111,454,008 - 111,454,744)
sequence
gaattcataacgtcctgaagaacagttagtgctcttaaccaccgagccat
ctctaaagttgatatcaggaattatcaactctttgcactttaacagttga
ggcaggatctcgcagtcaaacacagagctcacagatatggctagtatcac
tagccagctttttctggagatcccatctccatgaagctagaattacactt
tcacacacatacccaacatttgcattggttgtggggatcaaaacgctggt
cgtcacacttgtgatgttagctgttgagccaactccccagcacagttttt
actttaatttagtctccttctgattagacacacaatattgccaataacta
cattttaaagtgtcttttttccatatctaatattacaggataattattta
aatgtcagtcaaacatggagatttttttaaaaaatatattaccagtcact
tttccttgggtcattattttgtatgaatagcaaggtaggcttaagactcg
gacatttgtaattcttctccttaacttctctatctcttcataaaataaac
aacgctctttcttattcttttgtcattacatccccagccaatataaacaa
ggtcctggtatgtctaaatggttttcactggactaaaatatgcatatgct
tcaataccctactctatatgtgtaactcacatcttcaaaatatgtcacct
ggcatttgcctccagttaaatgacatcaaaaaacctattattttatgcat
gaatagaattcttttagcacgatcaaggagtggcaccctgacaggcagtt
ggccctgttctttctttgtcttggaggagttcaaatgaagtaaaatgtct
taaaataaaatctccaataaattcaattacatgtattgtattgagcaatt
tgtttaatttgagaccttgttactatttttgatggctaggcacataaaat
gtgtgtgtg
gaattcatatcacaatcccttaaaagaaaggtagaaatccttagctttct
atctttccagaaggtcttggcctttggatagaacttcagtcctactaagc
acacagcttgactctgctacaattcctttcttacaggagcagctgcaggt
agttctgcaaaggctgatggcagataagaaaaaatttgaaaactggaaag
atgaccttcagaaggatagaacttactgggaggcaagtagggacccttcc
taagggtgtcaacctgatgcccaagagggaccttggcaagaagctcctgg
ggtctttacttcctgggagtttatgaggccaataaaccttgatactcctc
cctactggttaccctggttggagatgcagagtcagtgtttcacacctgag
ctgggctctgtgaggagctggcaccacagaggatgcttggtcagaaggga
tactgggtcatttccatggtgccttctgaaactgagtctacagaagaaga
tacttgggaatgggtgggtaatggatatgtgatcagtgtttaacttctgc
cagggagttaaaagcagaatgtaatggcacgtatgatggcttatgccttt
aatcccagcatctgggaggcagaaacagatatctgttaagttaaatactg
gtcttgtgtacatagcaaagtactaggtcaactatggctacaaaggtaaa
accgggtctaggtaggtacgttaggtaggtaggttggtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111335762_111336720
seq2: B6Ng01-283K22.b_49_1007

seq1  GAATTCATAACGTCCTGAAGAACAGTTAGTGCTCTTAACCACCGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACGTCCTGAAGAACAGTTAGTGCTCTTAACCACCGAGCCAT  50

seq1  CTCTAAAGTTGATATCAGGAATTATCAACTCTTTGCACTTTAACAGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGTTGATATCAGGAATTATCAACTCTTTGCACTTTAACAGTTGA  100

seq1  GGCAGGATCTCGCAGTCAAACACAGAGCTCACAGATATGGCTAGTATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATCTCGCAGTCAAACACAGAGCTCACAGATATGGCTAGTATCAC  150

seq1  TAGCCAGCTTTTTCTGGAGATCCCATCTCCATGAAGCTAGAATTACACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGCTTTTTCTGGAGATCCCATCTCCATGAAGCTAGAATTACACTT  200

seq1  TCACACACATACCCAACATTTGCATTGGTTGTGGGGATCAAAACGCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACATACCCAACATTTGCATTGGTTGTGGGGATCAAAACGCTGGT  250

seq1  CGTCACACTTGTGATGTTAGCTGTTGAGCCAACTCCCCAGCACAGTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACACTTGTGATGTTAGCTGTTGAGCCAACTCCCCAGCACAGTTTTT  300

seq1  ACTTTAATTTAGTCTCCTTCTGATTAGACACACAATATTGCCAATAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATTTAGTCTCCTTCTGATTAGACACACAATATTGCCAATAACTA  350

seq1  CATTTTAAAGTGTCTTTTTTCCATATCTAATATTACAGGATAATTATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAAGTGTCTTTTTTCCATATCTAATATTACAGGATAATTATTTA  400

seq1  AATGTCAGTCAAACATGGAGATTTTTTTAAAAAATATATTACCAGTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGTCAAACATGGAGATTTTTTTAAAAAATATATTACCAGTCACT  450

seq1  TTTCCTTGGGTCATTATTTTGTATGAATAGCAAGGTAGGCTTAAGACTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGGGTCATTATTTTGTATGAATAGCAAGGTAGGCTTAAGACTCG  500

seq1  GACATTTGTAATTCTTCTCCTTAACTTCTCTATCTCTTCATAAAATAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGTAATTCTTCTCCTTAACTTCTCTATCTCTTCATAAAATAAAC  550

seq1  AACGCTCTTTCTTATTCTTTTGTCATTACATCCCCAGCCAATATAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTCTTTCTTATTCTTTTGTCATTACATCCCCAGCCAATATAAACAA  600

seq1  GGTCCTGGTATGTCTAAATGGTTTTCACTGGACTAAAATATGCATATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGTATGTCTAAATGGTTTTCACTGGACTAAAATATGCATATGCT  650

seq1  TCAATACCCTACTCTATATGTGTAACTCACATCTTCAAAATATGTCACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACCCTACTCTATATGTGTAACTCACATCTTCAAAATATGTCACCT  700

seq1  GGCATTTGCCTCCAGTTAAATGACATCAAAAAACCTATTATTTTATGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTGCCTCCAGTTAAATGACATCAAAAAACCTATTATTTTATGCAT  750

seq1  GAATAGAATTCTTTTAGCAGGATCAAGGAGTGGCACCCTGACAGGCAGTT  800
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAATAGAATTCTTTTAGCACGATCAAGGAGTGGCACCCTGACAGGCAGTT  800

seq1  GGCCCTGTTCTTTCTTTGTCTTGGAGGAGTTCAAATGAAGTAAAATGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGTTCTTTCTTTGTCTTGGAGGAGTTCAAATGAAGTAAAATGTCT  850

seq1  TAAAATAAAATCTCCAATAAATTCAATTACATGTATTGTATTGAGCAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAATCTCCAATAAATTCAATTACATGTATTGTATTGAGCAATT  900

seq1  TGTTTAATTTGAGACCTTGTTACTATTTTTGATGGCTAGGCACATAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTTGAGACCTTGTTACTATTTTTGATGGCTAGGCACATAAAAT  950

seq1  GTGTGTGTG  959
      |||||||||
seq2  GTGTGTGTG  959

seq1: chr7_111454008_111454744
seq2: B6Ng01-283K22.g_66_806 (reverse)

seq1  CCTACCAACCTACCTACCT-ACGTACCTACCTAGACCCGGTTTTACC-TT  48
      | ||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  CTTACCAACCTACCTACCTAACGTACCTACCTAGACCCGGTTTTACCTTT  50

seq1  GTAGCCATAGTTGACCTAGTAC-TTGCTATGTACACAAGACCAGTATTTA  97
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTAGCCATAGTTGACCTAGTACTTTGCTATGTACACAAGACCAGTATTTA  100

seq1  ACTT-ACAGATATCTGTTTCTGCCTCCCAGATGCTGGGATTAAAGGCATA  146
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACAGATATCTGTTTCTGCCTCCCAGATGCTGGGATTAAAGGCATA  150

seq1  AGCCATCATACGTGCCATTACATTCTGCTTTTAACTCCCTGGCAGAAGTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCATACGTGCCATTACATTCTGCTTTTAACTCCCTGGCAGAAGTT  200

seq1  AAACACTGATCACATATCCATTACCCACCCATTCCCAAGTATCTTCTTCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGATCACATATCCATTACCCACCCATTCCCAAGTATCTTCTTCT  250

seq1  GTAGACTCAGTTTCAGAAGGCACCATGGAAATGACCCAGTATCCCTTCTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTCAGTTTCAGAAGGCACCATGGAAATGACCCAGTATCCCTTCTG  300

seq1  ACCAAGCATCCTCTGTGGTGCCAGCTCCTCACAGAGCCCAGCTCAGGTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCATCCTCTGTGGTGCCAGCTCCTCACAGAGCCCAGCTCAGGTGT  350

seq1  GAAACACTGACTCTGCATCTCCAACCAGGGTAACCAGTAGGGAGGAGTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTGACTCTGCATCTCCAACCAGGGTAACCAGTAGGGAGGAGTAT  400

seq1  CAAGGTTTATTGGCCTCATAAACTCCCAGGAAGTAAAGACCCCAGGAGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTATTGGCCTCATAAACTCCCAGGAAGTAAAGACCCCAGGAGCT  450

seq1  TCTTGCCAAGGTCCCTCTTGGGCATCAGGTTGACACCCTTAGGAAGGGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCAAGGTCCCTCTTGGGCATCAGGTTGACACCCTTAGGAAGGGTC  500

seq1  CCTACTTGCCTCCCAGTAAGTTCTATCCTTCTGAAGGTCATCTTTCCAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTGCCTCCCAGTAAGTTCTATCCTTCTGAAGGTCATCTTTCCAGT  550

seq1  TTTCAAATTTTTTCTTATCTGCCATCAGCCTTTGCAGAACTACCTGCAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATTTTTTCTTATCTGCCATCAGCCTTTGCAGAACTACCTGCAGC  600

seq1  TGCTCCTGTAAGAAAGGAATTGTAGCAGAGTCAAGCTGTGTGCTTAGTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTGTAAGAAAGGAATTGTAGCAGAGTCAAGCTGTGTGCTTAGTAG  650

seq1  GACTGAAGTTCTATCCAAAGGCCAAGACCTTCTGGAAAGATAGAAAGCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAGTTCTATCCAAAGGCCAAGACCTTCTGGAAAGATAGAAAGCTA  700

seq1  AGGATTTCTACCTTTCTTTTAAGGGATTGTGATATGAATTC  737
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTCTACCTTTCTTTTAAGGGATTGTGATATGAATTC  741