BAC Information

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BAC

Clone NameB6Ng01-283L12
Chromosome7 (Build37)
Map Location 59,312,100 - 59,431,042
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283L12.bB6Ng01-283L12.g
ACCGA082607GA082608
length1,1891,083
definitionB6Ng01-283L12.b B6Ng01-283L12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,312,100 - 59,313,285)(59,429,954 - 59,431,042)
sequence
gaattctagtatttatacatattctgagaatagatgcattataattgaca
tttaatgtctgaataatagattaattctgttaatttagtgatgttggttg
ttgatattgtaaacagtctattgtgatagaggaggaagaaggaggagcag
tgggagagctaaaaaaaaaaaacagaaagagatactataagagagaaggg
agtgaaataattagaaaagagctagttttattccttcataagtccaatta
agaactgatataaaatatgaaaatttgagagtcatttacatcagctgaaa
agagaagtgttagcttattcgtgattccacatggctgccctcatggacct
gtcatcacctgctgccactaccaggtgtccccctaccccagttctcttgt
tctttctatgtgaccttctctctctcccctcttctgtcctctgcacaccc
ccccccttctttgctttcaaggctctactcccatctgtctgctcatctgt
ctactcccatctgtctgcttgttcccctctcttcccccgtaaacctcctt
tataccagatctgttgcatggcataattactcaggggcacacttcagcat
gggtgcatcaggtaccaccttaccacatatttcatagcaggaaatcataa
tgtttacctggagaggggaggtcacagtgcctacctggagagtgattgga
taaaatatggtgggttagtgggagcttcccctaggtgagactttgttatt
tcattgactctttcattcaggctacttagtatttcattgtccgtataata
taatctgtgtttctttgtcatgtttttgtataaaaaacattcaaacctac
ttcatctctcactgaaattgattattttatctgttgttctctcttttcct
gaataattatttaagttagaactattaaataaattacattttagtatcca
gtacttttatacacatatacagtgaatttttatccatcccccacttgata
tttccattcctaacttcccccttctgctgctgaaggttttctctctcttt
ctgtcctctatgatttcatgtgcttatatggtggtgaccaatgagtttaa
taggctttaacttgagcaatgggtacggaatactactgtcagcatggaca
ggtaatcagtgaacatacccacatgagaagagagcaact

gaattcaggtagaagagcaggaacaaataataacatttttagctgtactt
ccatcttgcaacattttcttagagatactcattacaaatatataaaaaat
gatactattttgtttttctcactgtttttatattatatattctttgtgcc
attctattccaaactgttgcatcacaggtcagaaatgtaagtgcttgctc
tcaaggtggttaaagaataacactggaaagttgctcaattatttaaaata
ctagagatgttgaccttacatggaatgactgattgttgggtgtaatgctt
tcagaagccatggtctgtcctgtgtctatgtgcttcttacttccaccagc
atgcccaatgactccttagaacactaaaggatgctggaaatcaatgtgaa
ctgcacttgaggatgctcaattaatgctggcacctacctgaggggaggga
gaaagttgggagtcatgcattggtgtagcctggggttcacttgttttatg
agaaagtgggtctgagacctccaagaattggaacaagttgctttctcctg
gcaggttggagaggagcatcatgttactcacatcatcattcctctccaga
aaggaggcccggatttttgttatgctcacaatgaggaagaactctttttt
tatacaagaagaaatgggtcttcttacattaggttggattcaggtaagca
gattcaggtagctggcacctcttgcctgtctcttagaaacagcctgccca
aatcttgctctgcacagagtcaatctatttcagatcaacatctttgagaa
cgtacagtcaataatgtacagtttgagtcaaagcagaatttcctagtgct
tcttacagcttgtgtagttttatgttttatcaaagtaaattcttcaaaga
ttcatttctgtgtgagtctgtgtggagaatctgagatgccaggatgtatg
agaactatagagaccatgtacctaaaggttaatataatgaaactatttta
aatatccaagagagttctaatggtgactttgtatttatggaagcactttg
tgtacagccaagagctctatatgcagttttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59312100_59313285
seq2: B6Ng01-283L12.b_45_1232

seq1  GAATTCTAGTATTTATACATATTCTGAGAATAGATGCATTATAATTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTATTTATACATATTCTGAGAATAGATGCATTATAATTGACA  50

seq1  TTTAATGTCTGAATAATAGATTAATTCTGTTAATTTAGTGATGTTGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTCTGAATAATAGATTAATTCTGTTAATTTAGTGATGTTGGTTG  100

seq1  TTGATATTGTAAACAGTCTATTGTGATAGAGGAGGAAGAAGGAGGAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATTGTAAACAGTCTATTGTGATAGAGGAGGAAGAAGGAGGAGCAG  150

seq1  TGGGAGAGCTAAAAAAAAAAAACAGAAAGAGATACTATAAGAGAGAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGCTAAAAAAAAAAAACAGAAAGAGATACTATAAGAGAGAAGGG  200

seq1  AGTGAAATAATTAGAAAAGAGCTAGTTTTATTCCTTCATAAGTCCAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAATAATTAGAAAAGAGCTAGTTTTATTCCTTCATAAGTCCAATTA  250

seq1  AGAACTGATATAAAATATGAAAATTTGAGAGTCATTTACATCAGCTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGATATAAAATATGAAAATTTGAGAGTCATTTACATCAGCTGAAA  300

seq1  AGAGAAGTGTTAGCTTATTCGTGATTCCACATGGCTGCCCTCATGGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTGTTAGCTTATTCGTGATTCCACATGGCTGCCCTCATGGACCT  350

seq1  GTCATCACCTGCTGCCACTACCAGGTGTCCCCCTACCCCAGTTCTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCACCTGCTGCCACTACCAGGTGTCCCCCTACCCCAGTTCTCTTGT  400

seq1  TCTTTCTATGTGACCTTCTCTCTCTCCCCTCTTCTGTCCTCTGCACACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTATGTGACCTTCTCTCTCTCCCCTCTTCTGTCCTCTGCACACCC  450

seq1  CCCCCCTTCTTTGCTTTCAAGGCTCTACTCCCATCTGTCTGCTCATCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTTCTTTGCTTTCAAGGCTCTACTCCCATCTGTCTGCTCATCTGT  500

seq1  CTACTCCCATCTGTCTGCTTGTTCCCCTCTCTTCCCCCGTAAACCTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCCATCTGTCTGCTTGTTCCCCTCTCTTCCCCCGTAAACCTCCTT  550

seq1  TATACCAGATCTGTTGCATGGCATAATTACTCAGGGGCACACTTCAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAGATCTGTTGCATGGCATAATTACTCAGGGGCACACTTCAGCAT  600

seq1  GGGTGCATCAGGTACCACCTTACCACATATTTCATAGCAGGAAATCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCATCAGGTACCACCTTACCACATATTTCATAGCAGGAAATCATAA  650

seq1  TGTTTACCTGGAGAGGGGAGGTCACAGTGCCTACCTGGAGAGTGATTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTGGAGAGGGGAGGTCACAGTGCCTACCTGGAGAGTGATTGGA  700

seq1  TAAAATATGGTGGGTTAGTGGGAGCTTCCCCTAGGTGAGACTTTGTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATGGTGGGTTAGTGGGAGCTTCCCCTAGGTGAGACTTTGTTATT  750

seq1  TCATTGACTCTTTCATTCAGGCTACTTAGTATTTCATTGTCCGTATAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACTCTTTCATTCAGGCTACTTAGTATTTCATTGTCCGTATAATA  800

seq1  TAATCTGTGTTTCTTTGTCATGTTTTTGTATAAAAAACATTCAAACCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGTGTTTCTTTGTCATGTTTTTGTATAAAAAACATTCAAACCTAC  850

seq1  TTCATCTCTCACTGAAATTGATTATTTTATCTGTTGTTCTCTCTTTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCTCACTGAAATTGATTATTTTATCTGTTGTTCTCTCTTTTCCT  900

seq1  GAATAATTATTTAAGTTAGAACTATTAAAATAATTACATTTTAGTATCCA  950
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  GAATAATTATTTAAGTTAGAACTATTAAATAAATTACATTTTAGTATCCA  950

seq1  GTACTTTTATACACATATACAGTGAA-TTTTATCCAT-CCCCACTTGATA  998
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  GTACTTTTATACACATATACAGTGAATTTTTATCCATCCCCCACTTGATA  1000

seq1  TTTCCATTCCTTACTTCCCCCTTCTGCTGCTGAAAGTTTTCTTCTCTCTT  1048
      ||||||||||| |||||||||||||||||||||| |||||| ||||||||
seq2  TTTCCATTCCTAACTTCCCCCTTCTGCTGCTGAAGGTTTTC-TCTCTCTT  1049

seq1  TCTGTCCCTCTATTGATTTCATGTGCTTATATGTGTGTGACCCCATGAGT  1098
      ||||| |||||| ||||||||||||||||||||   |||| || ||||||
seq2  TCTGT-CCTCTA-TGATTTCATGTGCTTATATGGTGGTGA-CCAATGAGT  1096

seq1  TTAATTAGGGTTTTAACATGAGC-ATGGGTACGAGATCACTTACTG-CAG  1146
      |||||   || |||||| ||||| ||||||||| ||  || ||||| |||
seq2  TTAAT--AGGCTTTAACTTGAGCAATGGGTACG-GAATAC-TACTGTCAG  1142

seq1  CATGGACAGGTTATCAGTGAACATA-CCAC-TGA----AGAGCAAC  1186
      ||||||||||| ||||||||||||| |||| |||    ||||||||
seq2  CATGGACAGGTAATCAGTGAACATACCCACATGAGAAGAGAGCAAC  1188


seq1: chr7_59429954_59431042
seq2: B6Ng01-283L12.g_65_1147 (reverse)

seq1  GAAAAAACTTGCATATAGGAGCTCTTTGGCTGTACACAAAGTGCTTTCAT  50
      |||||||| |||||||| |||||| ||||||||||||||||||||| |||
seq2  GAAAAAAC-TGCATATA-GAGCTC-TTGGCTGTACACAAAGTGCTTCCAT  47

seq1  AAATACAAAAGTCAACCATTAGAACTCTCTTGGATTATTTAAAATAGTTT  100
      |||||| |||||| |||||||||||||||||||| |||||||||||||||
seq2  AAATAC-AAAGTC-ACCATTAGAACTCTCTTGGA-TATTTAAAATAGTTT  94

seq1  CATTTATA-TAACCTTTAGGTACATGGTCTCTATAGTTCTCATACATCCT  149
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CA-TTATATTAACCTTTAGGTACATGGTCTCTATAGTTCTCATACATCCT  143

seq1  GGCAATCTCAGATTCTCCACACAGACTCACACAGAAATGAATCTTTGAAG  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGC-ATCTCAGATTCTCCACACAGACTCACACAGAAATGAATCTTTGAAG  192

seq1  AA-TTACTTTGATAAAACATAAAACTACACAAGCTGTAAGAAGCACTAGG  248
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTTTGATAAAACATAAAACTACACAAGCTGTAAGAAGCACTAGG  242

seq1  AAATTCTGCTTTGACTCAAACTGTACATTATTGACTGTACGTTCTCAAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGCTTTGACTCAAACTGTACATTATTGACTGTACGTTCTCAAAG  292

seq1  ATGTTGATCTGAAATAGATTGACTCTGTGCAGAGCAAGATTTGGGCAGGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATCTGAAATAGATTGACTCTGTGCAGAGCAAGATTTGGGCAGGC  342

seq1  TGTTTCTAAGAGACAGGCAAGAGGTGCCAGCTACCTGAATCTGCTTACCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAAGAGACAGGCAAGAGGTGCCAGCTACCTGAATCTGCTTACCT  392

seq1  GAATCCAACCTAATGTAAGAAGACCCATTTCTTCTTGTATAAAAAAAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAACCTAATGTAAGAAGACCCATTTCTTCTTGTATAAAAAAAGAG  442

seq1  TTCTTCCTCATTGTGAGCATAACAAAAATCCGGGCCTCCTTTCTGGAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCATTGTGAGCATAACAAAAATCCGGGCCTCCTTTCTGGAGAG  492

seq1  GAATGATGATGTGAGTAACATGATGCTCCTCTCCAACCTGCCAGGAGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGATGTGAGTAACATGATGCTCCTCTCCAACCTGCCAGGAGAAA  542

seq1  GCAACTTGTTCCAATTCTTGGAGGTCTCAGACCCACTTTCTCATAAAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGTTCCAATTCTTGGAGGTCTCAGACCCACTTTCTCATAAAACA  592

seq1  AGTGAACCCCAGGCTACACCAATGCATGACTCCCAACTTTCTCCCTCCCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACCCCAGGCTACACCAATGCATGACTCCCAACTTTCTCCCTCCCC  642

seq1  TCAGGTAGGTGCCAGCATTAATTGAGCATCCTCAAGTGCAGTTCACATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGGTGCCAGCATTAATTGAGCATCCTCAAGTGCAGTTCACATTG  692

seq1  ATTTCCAGCATCCTTTAGTGTTCTAAGGAGTCATTGGGCATGCTGGTGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGCATCCTTTAGTGTTCTAAGGAGTCATTGGGCATGCTGGTGGA  742

seq1  AGTAAGAAGCACATAGACACAGGACAGACCATGGCTTCTGAAAGCATTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAAGCACATAGACACAGGACAGACCATGGCTTCTGAAAGCATTAC  792

seq1  ACCCAACAATCAGTCATTCCATGTAAGGTCAACATCTCTAGTATTTTAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAATCAGTCATTCCATGTAAGGTCAACATCTCTAGTATTTTAAA  842

seq1  TAATTGAGCAACTTTCCAGTGTTATTCTTTAACCACCTTGAGAGCAAGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGCAACTTTCCAGTGTTATTCTTTAACCACCTTGAGAGCAAGCA  892

seq1  CTTACATTTCTGACCTGTGATGCAACAGTTTGGAATAGAATGGCACAAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTTCTGACCTGTGATGCAACAGTTTGGAATAGAATGGCACAAAG  942

seq1  AATATATAATATAAAAACAGTGAGAAAAACAAAATAGTATCATTTTTTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAATATAAAAACAGTGAGAAAAACAAAATAGTATCATTTTTTAT  992

seq1  ATATTTGTAATGAGTATCTCTAAGAAAATGTTGCAAGATGGAAGTACAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTAATGAGTATCTCTAAGAAAATGTTGCAAGATGGAAGTACAGC  1042

seq1  TAAAAATGTTATTATTTGTTCCTGCTCTTCTACCTGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTTATTATTTGTTCCTGCTCTTCTACCTGAATTC  1083


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