BAC Information

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BAC

Clone NameB6Ng01-283M17
Chromosome7 (Build37)
Map Location 29,938,224 - 30,153,522
singlet/doubletdoublet
Overlap geneRasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3
Upstream geneFbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1
Downstream geneLOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283M17.bB6Ng01-283M17.g
ACCGA082663GA082664
length2561,084
definitionB6Ng01-283M17.b B6Ng01-283M17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,153,267 - 30,153,522)(29,938,224 - 29,939,308)
sequence
aaagtcttaagcttagttgctgtcattctcagtcaatctccccacaagcg
acacagctctggactgggtctccccagcatagcaacgcctgcaaaaatag
atctttatactcccctgttgtaaaatataaatgcggtgacaacagtgtac
cgtgtaagggggtgcctggggggcccatgccaaggtgttcccctgagaaa
tcaagccttgcgacagacctggtataaaggaggtttatttggggggaagg
ggagga
gaattcagttgagtccagaggccaggaaccaaggagaacactgaaccagg
gaaacccccaaaagaccaatctaaaagccaaggatgcccagactctcccc
gccccaggtgtgcccaccttgttgattgcacaactggtccctcgtcgggc
agccacactggtagctgggaccaggcgggaaaggtcagctcgggcagcca
gaacatgtgcgatagagacatcagattctggagtcagaagccctcggatt
ggggacagcaccgccttcatgacctctccgtgggcctagagcaggagaag
ggcatacacggagaagatgcccaagagctcatccctactcagggcctccg
tgtgctttggagggagtgggtgcttctccaaggtgcatgtgctgtggtgg
agagctggatgcgagtaaccctggagtctcagcactagggaagagggagg
gtcaggagggactgtcaagatcagcctcagctacctcgcaagttgaagca
gaaacaaaatctcagaaggggttgaccatgtgagaactagagcctggccg
acaatcacggggtaccaccatcggagggattcctgcaagtcctattgtgt
tatggtgacatgggatgggacattggccagcacctgtccaaggctacatg
tttcagcctccaaaaccataagccaaaaggaacttgtttttcctgaaaaa
aactctgggtttctggtattttctgtcatggctacacaaaaacagtttta
aaaaaaatagccttattgtctattttgttacatacggtaaatagttctga
ggacactcccagctgagagctgggatttctagaatgccctttgaggccct
gggagtctagaagtcttaaaccctgtaagattgtgaagtgtggtttggag
agatggcttgaccttaaggaacgtactgctctataggagacctgggaatc
agtcccctgtacccacatgtgtaatacattatagctccagttccaaggga
tcatcacccctgctgggctctgtgatactgcacaccacaatgatgtgcac
accacatacagttaagacacataaattgaaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30153267_30153522
seq2: B6Ng01-283M17.b_50_305 (reverse)

seq1  TCCTCCCCTTCCCCCCAAATAAACCTCCTTTATACCAGGTCTGTCGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCTTCCCCCCAAATAAACCTCCTTTATACCAGGTCTGTCGCAAG  50

seq1  GCTTGATTTCTCAGGGGAACACCTTGGCATGGGCCCCCCAGGCACCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATTTCTCAGGGGAACACCTTGGCATGGGCCCCCCAGGCACCCCCT  100

seq1  TACACGGTACACTGTTGTCACCGCATTTATATTTTACAACAGGGGAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGGTACACTGTTGTCACCGCATTTATATTTTACAACAGGGGAGTAT  150

seq1  AAAGATCTATTTTTGCAGGCGTTGCTATGCTGGGGAGACCCAGTCCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTATTTTTGCAGGCGTTGCTATGCTGGGGAGACCCAGTCCAGAG  200

seq1  CTGTGTCGCTTGTGGGGAGATTGACTGAGAATGACAGCAACTAAGCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCGCTTGTGGGGAGATTGACTGAGAATGACAGCAACTAAGCTTAA  250

seq1  GACTTT  256
      ||||||
seq2  GACTTT  256

seq1: chr7_29938224_29939308
seq2: B6Ng01-283M17.g_64_1147

seq1  GAATTCAGTTGAGTCCAGAGGCCAGGAACCAAGGAGAACACTGAACCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGAGTCCAGAGGCCAGGAACCAAGGAGAACACTGAACCAGG  50

seq1  GAAACCCCCAAAAGACCAATCTAAAAGCCAAGGATGCCCAGACTCTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCCCAAAAGACCAATCTAAAAGCCAAGGATGCCCAGACTCTCCCC  100

seq1  GCCCCAGGTGTGCCCACCTTGTTGATTGCACAACTGGTCCCTCGTCGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGGTGTGCCCACCTTGTTGATTGCACAACTGGTCCCTCGTCGGGC  150

seq1  AGCCACACTGGTAGCTGGGACCAGGCGGGAAAGGTCAGCTCGGGCAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACTGGTAGCTGGGACCAGGCGGGAAAGGTCAGCTCGGGCAGCCA  200

seq1  GAACATGTGCGATAGAGACATCAGATTCTGGAGTCAGAAGCCCTCGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTGCGATAGAGACATCAGATTCTGGAGTCAGAAGCCCTCGGATT  250

seq1  GGGGACAGCACCGCCTTCATGACCTCTCCGTGGGCCTAGAGCAGGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAGCACCGCCTTCATGACCTCTCCGTGGGCCTAGAGCAGGAGAAG  300

seq1  GGCATACACGGAGAAGATGCCCAAGAGCTCATCCCTACTCAGGGCCTCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACACGGAGAAGATGCCCAAGAGCTCATCCCTACTCAGGGCCTCCG  350

seq1  TGTGCTTTGGAGGGAGTGGGTGCTTCTCCAAGGTGCATGTGCTGTGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTGGAGGGAGTGGGTGCTTCTCCAAGGTGCATGTGCTGTGGTGG  400

seq1  AGAGCTGGATGCGAGTAACCCTGGAGTCTCAGCACTAGGGAAGAGGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGATGCGAGTAACCCTGGAGTCTCAGCACTAGGGAAGAGGGAGG  450

seq1  GTCAGGAGGGACTGTCAAGATCAGCCTCAGCTACCTCGCAAGTTGAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAGGGACTGTCAAGATCAGCCTCAGCTACCTCGCAAGTTGAAGCA  500

seq1  GAAACAAAATCTCAGAAGGGGTTGACCATGTGAGAACTAGAGCCTGGCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAATCTCAGAAGGGGTTGACCATGTGAGAACTAGAGCCTGGCCG  550

seq1  ACAATCACGGGGTACCACCATCGGAGGGATTCCTGCAAGTCCTATTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCACGGGGTACCACCATCGGAGGGATTCCTGCAAGTCCTATTGTGT  600

seq1  TATGGTGACATGGGATGGGACATTGGCCAGCACCTGTCCAAGGCTACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGACATGGGATGGGACATTGGCCAGCACCTGTCCAAGGCTACATG  650

seq1  TTTCAGCCTCCAAAACCATAAGCCAAAAGGAACTTGTTTTTCCTGAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCTCCAAAACCATAAGCCAAAAGGAACTTGTTTTTCCTGAAAAA  700

seq1  AACTCTGGGTTTCTGGTATTTTCTGTCATGGCTACACAAAAACAGTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGGTTTCTGGTATTTTCTGTCATGGCTACACAAAAACAGTTTTA  750

seq1  AAAAAAATAGCCTTATTGTCTATTTTGTTACATACGGTAAATAGTTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAGCCTTATTGTCTATTTTGTTACATACGGTAAATAGTTCTGA  800

seq1  GGACACTCCCAGCTGAGAGCTGGGATTTCTAGAATGCCC-TTGAGGCCCT  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGACACTCCCAGCTGAGAGCTGGGATTTCTAGAATGCCCTTTGAGGCCCT  850

seq1  GGGAGTCTAGAAGTCTTAAACCCTGTAAGATTGTGAAGTGTGGTTTGGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCTAGAAGTCTTAAACCCTGTAAGATTGTGAAGTGTGGTTTGGAG  900

seq1  AGATGGCTTGACCTTAAGGGAACGTACTGCTCTTATAGGAGACCTGGG-A  948
      ||||||||||||||||| |||||||||||||| ||||||||||||||| |
seq2  AGATGGCTTGACCTTAA-GGAACGTACTGCTC-TATAGGAGACCTGGGAA  948

seq1  TCAGTCCCCTGTACCCACATGGTGGTATACATTATAGCTCCAGTTCCAAG  998
      |||||||||||||||||||| |||  ||||||||||||||||||||||||
seq2  TCAGTCCCCTGTACCCACAT-GTGTAATACATTATAGCTCCAGTTCCAAG  997

seq1  GGATCCATCACCCCCTGCTGGCCTCTGTGGATACTGCACA-CAC-ATGAT  1046
      |||| ||||| |||||||||| |||||| ||||||||||| ||| |||||
seq2  GGAT-CATCA-CCCCTGCTGGGCTCTGT-GATACTGCACACCACAATGAT  1044

seq1  GTGCACA-CACATACAGGTAAGACACATAAAATGAAAAGT  1085
      ||||||| ||||||||| ||||||||||||| ||||||||
seq2  GTGCACACCACATACAGTTAAGACACATAAATTGAAAAGT  1084