BAC Information

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BAC

Clone NameB6Ng01-283M23
Chromosome7 (Build37)7 (Build37)
Map Location 46,527,413 - 46,528,47848,390,270 - 48,390,905
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100038955, LOC100038967, LOC620018, LOC100038914
Downstream geneEG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik, EG628161
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283M23.bB6Ng01-283M23.g
ACCGA082675GA082676
length1,069725
definitionB6Ng01-283M23.b B6Ng01-283M23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(46,527,413 - 46,528,478)(48,390,270 - 48,390,905)
sequence
gaattctttcttatttgagcaggtaacagacaactgtcttttttatgaat
tagttcaatcaacaacaattgtaaaacatcttcattcatgtctgtttggt
ctttttgaagtctttcctgtctgttgccaagatcttcaggggatcttgtg
cccctatcatatttgatccatattagtgtggaaggcgtctgaagccgttg
ctccttttctgttacacaaatacaaacctctctcccaaaataccacatcc
ttggtctggtaacccagcatggactggtgcaatttagcagtctcattttt
cttagggcctgctctactctgacctttctcccaaagtaatagtaatgtta
tcaataccaccaaacttataaccaccttcattgggtaattaaaataactc
aaaaacacttaaaacatttcaagcaattgttactgtttctttctctttat
ctccttgcctttgttttctacattaggaaccaaaggcctggttttcttta
ttcttccatatatattccaaaacacttaaacaattagcattatttctccc
ttgtatccttaaaacaatgtagtttttcgttattcctcccttctatggag
attaatattgctttaaagcaatttaaaacaattaatattattcattgaga
tagggtttttctctatctctacacttggtttcctacaattgtgatcaaaa
gcctggatttctacatttttccatgtatacttaaaaacagtctaacaatt
accactatttttccattctattctctttttaaaaagatatttaagtttaa
tataaattttatacaaagaaaatgtgaaaacaatactcccatatgttaaa
atcagttatacttcccaaataaggccagcaaggctagattgtttttgctg
ttgttgttttgttttgtttttttgacaaccacaattcacattcacaaatt
ctcttactcactgtgtctctctctgtccctctttctgtccctctctcctc
tctccctctctccctctttccctttctccgtctccctccctccccctcgt
ctcctcttctctcctgttt

gaattcaaggaactagacaccaacaaatcaaataacccagttaataaatc
gagcacatatcgaaaggctccatccagcaggcaatggaaaccaatgcaga
gacacataactaagcattagaataagctcagagagtcttgtggaagggtt
ggaggaaggactgagaagacccaaggagaatgggagctctataggaagac
caagagtcaactctcctagatacttgggggctcccagagactgaaccacc
aaccaaagagggagcatgggctaggcatgggtccaccacacatatgtagc
agatgtggagtttggtcttcatgttggtcccccaactagtaaagcagggc
cagccttttaacctgttgctcccctttggttccgatttccctggctgggc
tgccttgtctggcctaagttaggtaagatgtgcttggttctgcagtgact
tgatgtgccagactgtagtggtgccttggatggagacaactccttcttgg
agtagagagtaagggggaaatgggtagagaggaaagtaatattctgatgt
gaaatgaataaataaatgaaaaaaaaaagaaaaagttgtatgaaacaaca
agaaaaaatggggtatagatctaagcagagaatttttgacaaagaatttt
catatggggcaagaagcggttaaataatcatttcaaaatctcctagcaat
tagaacaatgcaagtcaaactactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_46527413_46528478
seq2: B6Ng01-283M23.b_50_1118

seq1  GAATTCTTTCTTATTTGAGCAGGTAACAGACAACTGTCTTTTTTATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTATTTGAGCAGGTAACAGACAACTGTCTTTTTTATGAAT  50

seq1  TAGTTCAATCAACAACAATTGTAAAACATCTTCATTCATGTCTGTTTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAATCAACAACAATTGTAAAACATCTTCATTCATGTCTGTTTGGT  100

seq1  CTTTTTGAAGTCTTTCCTGTCTGTTGCCAAGATCTTCAGGGGATCTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGAAGTCTTTCCTGTCTGTTGCCAAGATCTTCAGGGGATCTTGTG  150

seq1  CCCCTATCATATTTGATCCATATTAGTGTGGAAGGCATCTGAAGCCGTTG  200
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCCTATCATATTTGATCCATATTAGTGTGGAAGGCGTCTGAAGCCGTTG  200

seq1  CTCCTTTTCTGTTACACAAATACAAACCTCTCTCCCAAAATACCACATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTCTGTTACACAAATACAAACCTCTCTCCCAAAATACCACATCC  250

seq1  TTGGTCTGGTAACCCAGCATGGACTGGTGCAATTTAGCAGTCTCATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTGGTAACCCAGCATGGACTGGTGCAATTTAGCAGTCTCATTTTT  300

seq1  CTTAGGGCCTGCTCTACTCTGACCTTTCTCCCAAAGAAATAGTAATGTTA  350
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTAGGGCCTGCTCTACTCTGACCTTTCTCCCAAAGTAATAGTAATGTTA  350

seq1  TCAATACCACCAAACTTATAACCACCTTCATTGGGTAATTAAAATAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACCACCAAACTTATAACCACCTTCATTGGGTAATTAAAATAACTC  400

seq1  AAAAACACTTAAAACATTTCAAGCAATTGTTACTGTTTCTTTCTCTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACTTAAAACATTTCAAGCAATTGTTACTGTTTCTTTCTCTTTAT  450

seq1  CTCCTTGCCTTTGTTTTCTACATTAGGAACCAAAGGCCTGGTTTTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGCCTTTGTTTTCTACATTAGGAACCAAAGGCCTGGTTTTCTTTA  500

seq1  TTCTTCCATATATATTCCAAAACACTTAAACAATTAGCATTATTTCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCATATATATTCCAAAACACTTAAACAATTAGCATTATTTCTCCC  550

seq1  TTGTATCCTTAAAACAATGTAGTTTTTCGTTATTCCTCCCTTCTATGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCTTAAAACAATGTAGTTTTTCGTTATTCCTCCCTTCTATGGAG  600

seq1  ATTAATATTGCTTTAAAGCAATTTAAAACAATTAATATTATTCATTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATTGCTTTAAAGCAATTTAAAACAATTAATATTATTCATTGAGA  650

seq1  TAGGGTTTTTCTCTATCTCTACACTTGGTTTCCTACAATTGTGATCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTTTTCTCTATCTCTACACTTGGTTTCCTACAATTGTGATCAAAA  700

seq1  GCCTGGATTTCTACATTTTTCCATGTATACTTAAAAACAGTCTAACAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGATTTCTACATTTTTCCATGTATACTTAAAAACAGTCTAACAATT  750

seq1  ACCACTATTTTTCCATTCTATTCTCTTTTTAAAAAGATATTTAAGTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTATTTTTCCATTCTATTCTCTTTTTAAAAAGATATTTAAGTTTAA  800

seq1  CATAAATTTTATACAAAGAAAATGTGAAAACAATACTCCCATATGTTAAA  850
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTTTATACAAAGAAAATGTGAAAACAATACTCCCATATGTTAAA  850

seq1  ATCAGTTATACTTCCCAAATAAGGCCAGCAAGGCTAGATTGTTTTTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTATACTTCCCAAATAAGGCCAGCAAGGCTAGATTGTTTTTGCTG  900

seq1  TTGTTGTTTTGTTTTGTTTTTTTGACAACCACAATTCACATTCACAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTTGTTTTGTTTTTTTGACAACCACAATTCACATTCACAAATT  950

seq1  CTCTTACTCACTGTGTCTCTCTCTGTCCCTCTTTCTGTC-------CCTC  993
      |||||||||||||||||||||||||||||||||||||||       ||||
seq2  CTCTTACTCACTGTGTCTCTCTCTGTCCCTCTTTCTGTCCCTCTCTCCTC  1000

seq1  TCTCCCTCTCTCCCTCTTTCCCTTTCTCCCTCTCCCCCTCCCCTCCCCCT  1043
      ||||||||||||||||||||||||||||| ||||||    ||||||||||
seq2  TCTCCCTCTCTCCCTCTTTCCCTTTCTCCGTCTCCC---TCCCTCCCCCT  1047

seq1  CCTTCTCCCTCTCTCTCCTGTTT  1066
       | |||||   ||||||||||||
seq2  -CGTCTCCTCTTCTCTCCTGTTT  1069


seq1: chr7_48390270_48390905
seq2: B6Ng01-283M23.g_125_788

seq1  GAAAGGCTCCATCCAGCAGGCAATGGAAACCAATGCAGAGACACATAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCTCCATCCAGCAGGCAATGGAAACCAATGCAGAGACACATAACT  50

seq1  AAGCATTAGAATAAGCTCACAGAGTCTTGTGGAAGGGTTGGAGGAAGGAC  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGCATTAGAATAAGCTCAGAGAGTCTTGTGGAAGGGTTGGAGGAAGGAC  100

seq1  TGAGAAGACCCAAGGAGAATGGGAGCTCTATAGGAAGACCAAGAGTCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGACCCAAGGAGAATGGGAGCTCTATAGGAAGACCAAGAGTCAAC  150

seq1  TCTCCTAGATACTTGGGGGCTCCCAGAGACTGAACCACCAACCAAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAGATACTTGGGGGCTCCCAGAGACTGAACCACCAACCAAAGAGG  200

seq1  GAGCATGGGCTAGGCATGGGTCCACCACACATATGTAGCAGATGTGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGGCTAGGCATGGGTCCACCACACATATGTAGCAGATGTGGAGT  250

seq1  TTGGTCTTCATGTTGGTCCCCCAACTAGTAAAGCAGAGCCAGCCTTTTAA  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGGTCTTCATGTTGGTCCCCCAACTAGTAAAGCAGGGCCAGCCTTTTAA  300

seq1  CCTGTTGCTCCCCTTTGGTTCCGATTTCCCTGGCTGGGCTGCCTTGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGCTCCCCTTTGGTTCCGATTTCCCTGGCTGGGCTGCCTTGTCTG  350

seq1  GCCTAAGTTAGGTAGGATGTGCTTGGTTCTGCAGTGACTTGATGTGCCAG  400
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCCTAAGTTAGGTAAGATGTGCTTGGTTCTGCAGTGACTTGATGTGCCAG  400

seq1  ACTGTAGTGGTGCCTGGGATGGGGACAACTCCTCCTTGGAGTAGAGAGTA  450
      ||||||||||||||| |||||| |||||||||| ||||||||||||||||
seq2  ACTGTAGTGGTGCCTTGGATGGAGACAACTCCTTCTTGGAGTAGAGAGTA  450

seq1  AGGGGGAAATGGGTGGAGAGCGAAGTAATATTGTGATGTGGAGTGAATAA  500
      |||||||||||||| |||||  |||||||||| ||||||| | |||||||
seq2  AGGGGGAAATGGGTAGAGAGGAAAGTAATATTCTGATGTGAAATGAATAA  500

seq1  ATAAATG--AAAAAAGAGAAAAAGATGTATGAAATAACAAG-AAAAATGG  547
      |||||||  |||||| |||||||| ||||||||| |||||| ||||||||
seq2  ATAAATGAAAAAAAAAAGAAAAAGTTGTATGAAACAACAAGAAAAAATGG  550

seq1  GGTATAGATCTAAGCAGAGAATTTTTGACAAAGAAATCTCATAT-GGGCA  596
      ||||||||||||||||||||||||||||||||||| | |||||| |||||
seq2  GGTATAGATCTAAGCAGAGAATTTTTGACAAAGAATTTTCATATGGGGCA  600

seq1  AGAATC------------------------CCTAGCAATCAGGAAAATGC  622
      |||| |                        ||||||||| || | |||||
seq2  AGAAGCGGTTAAATAATCATTTCAAAATCTCCTAGCAATTAGAACAATGC  650

seq1  AAGTCAAACTACTC  636
      ||||||||||||||
seq2  AAGTCAAACTACTC  664


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