BAC Information

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BAC

Clone NameB6Ng01-283P06
Chromosome7 (Build37)
Map Location 8,002,707 - 8,003,468
singlet/doubletsinglet
Overlap geneLOC100042662
Upstream geneLOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170
Downstream geneLOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P06.bB6Ng01-283P06.g
ACCGA082779GA082780
length7631,221
definitionB6Ng01-283P06.b B6Ng01-283P06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaacatcatgtctctttgggggactttgatagctattaagaaa
gttaatggatgtggttggacttatgcttatgtcaatctaggaagttccag
gatacttactattcagaaatatgataggctttcaactagggactaccacc
agaagttgacagatactttcatggaggaatagagaaggcaatgtagaatt
aattcgggcatggtggaagaaaaaatcttacagccttgactgactgtcag
tcagagtgtttcattatttataccaagctcagcaagcagagatttgtttg
tgctgttccaagatatagagcttaatatttctgtccccagataggtgtga
tcttcatcttggtcacaattttacattatcattggtaaactgaaataaca
gcattattatttacaaacatggtaaataataatgtgatataaattttgtc
atcagagataaactgtgatggaacagaaatgaattttatcaacatttctc
tataacccagcttttaaatatctggagttttttttttttttttttttttt
ttttttttttttttttgcgaaagcgtgaaaaacacctcttagcccggcta
ctcctgacattttttcaacgagaaaagaggaaaaactcccctcccctatg
tggagagcgacatttgactccccgtgagtgtgtaactattttgagacaca
aatttaaatgtcactatatctctcgcgcagaatactcgcgcccccctgtg
atagatatagtaa
gaattccagttttatgtttaataccgaattctttacagaatgaaataaag
tttttactggaataagatggcccattgtctgtcttaataagtttaggcaa
tcccatggcattaaatgcttgtaggcaatggtcaattacgttttttgaag
cttctcctgtatgcagagaagcaaaaagaaatcctgaacaagtatcaatg
caaacatgtatatattttagttttccaaattctgcataatgggttatatc
catttgccaaatatgattaggcataaggcctctaggaaaggtgccaacaa
gtccctgatatgatatcatgtttgtcttctgaagccgtttaacagggttc
ctcatgagtcatcaacttatcttctgcgacagtgaattggtatggaagcg
ccgatgaaccctaaaagaaattttcttgtcccgcatggaccgattctgcc
atggcaaaacatggaggaagtcatcgagccgttttaccccaaggttggta
ataggcggcgaactaatccactggaaaccatgctgcgcattcactgcatg
atttattggtacaaccagaacgatgtgtcgatggaaaatgctctgtccta
aatgccctccgtgcttctgtttgccacaggtatccctggatagcgccttg
ctggaccgcaccaccatcgtgaatttccgccacctgctggagcagtatca
actggcccgccaattgttcaagaccatcaatcgctggctggccgaagaga
gcgtcatgatctactcaaagcctgtttgatcgatgccaccatcattgagg
cgcccagctcgacagacaacaataaagaagcaacgcgatctggatatacg
tcagaacagagaaaggcatatcagaggcattataggcatgtacagctcac
aatggtgtcgacgtatcgagtgggcctagacgcacagccagggtcacctt
caaagcctaactagcgtgagccacatcagcggagtaatctgcttgcatgg
agatgtagctgatttgtctcagcagagtccgggcctatcaatggggcgct
ccatcgcgaagaagctggactgacgtggcatgcctgactgggatgatcgc
ctgagagccccctggctacggtgagtagcctctgaatacatggcgttctt
cggcagaactcatcgaacgcatttccacctcgtatagtggattatcgacg
ccaattcacgtgcttcgcccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8002707_8003468
seq2: B6Ng01-283P06.b_49_811 (reverse)

seq1  TTACTATATCTATAACACGATGG-GCCTGAATTCTTTGCCAGAGATCTAA  49
      ||||||||||||| ||| |  || ||  | |||||  || |||||| || 
seq2  TTACTATATCTATCACAGGGGGGCGCGAGTATTCTGCGCGAGAGATATAG  50

seq1  TGCCAATTTAAATTCTGACTCTAAATAGTTATACACTCACAGGTAGTCAA  99
      || || || || || || ||| ||||||||| |||||||| || ||||||
seq2  TGACATTTAAATTTGTGTCTCAAAATAGTTACACACTCACGGGGAGTCAA  100

seq1  ATGTCGAACTCCACATACTGGATTGGAGTTTTTCATCCTTTCTCGTTGCT  149
      ||||||  |||||||||  |||  |||||||||| || ||||||||||  
seq2  ATGTCGCTCTCCACATAGGGGAGGGGAGTTTTTCCTCTTTTCTCGTTGAA  150

seq1  AAAATGTCATGAGTAGCCAGGCTAAGAATGGTATTTCAAGCCTTTGCAAA  199
      ||||||||| |||||||| ||||||||   || ||||| || || |||||
seq2  AAAATGTCAGGAGTAGCCGGGCTAAGAGGTGTTTTTCACGCTTTCGCAAA  200

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCAGATATTTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCAGATATTTAA  250

seq1  AAGCTGGGTTATAGAGAAATGTTGATAAAATTCATTTCTGTTCCATCACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGTTATAGAGAAATGTTGATAAAATTCATTTCTGTTCCATCACA  300

seq1  GTTTATCTCTGATGACAAAATTTATATCACATTATTATTTACCATGTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTCTGATGACAAAATTTATATCACATTATTATTTACCATGTTTG  350

seq1  TAAATAATAATGCTGTTATTTCAGTTTACCAATGATAATGTAAAATTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATAATGCTGTTATTTCAGTTTACCAATGATAATGTAAAATTGTG  400

seq1  ACCAAGATGAAGATCACACCTATCTGGGGACAGAAATATTAAGCTCTATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGATGAAGATCACACCTATCTGGGGACAGAAATATTAAGCTCTATA  450

seq1  TCTTGGAACAGCACAAACAAATCTCTGCTTGCTGAGCTTGGTATAAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAACAGCACAAACAAATCTCTGCTTGCTGAGCTTGGTATAAATAA  500

seq1  TGAAACACTCTGACTGACAGTCAGTCAAGGCTGTAAGATTTTTTCTTCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACACTCTGACTGACAGTCAGTCAAGGCTGTAAGATTTTTTCTTCCA  550

seq1  CCATGCCCGAATTAATTCTACATTGCCTTCTCTATTCCTCCATGAAAGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCGAATTAATTCTACATTGCCTTCTCTATTCCTCCATGAAAGTA  600

seq1  TCTGTCAACTTCTGGTGGTAGTCCCTAGTTGAAAGCCTATCATATTTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAACTTCTGGTGGTAGTCCCTAGTTGAAAGCCTATCATATTTCTG  650

seq1  AATAGTAAGTATCCTGGAACTTCCTAGATTGACATAAGCATAAGTCCAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAGTATCCTGGAACTTCCTAGATTGACATAAGCATAAGTCCAAC  700

seq1  CACATCCATTAACTTTCTTAATAGCTATCAAAGTCCCCCAAAGAGACATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCATTAACTTTCTTAATAGCTATCAAAGTCCCCCAAAGAGACATG  750

seq1  ATGTTAAGAATTC  762
      |||||||||||||
seq2  ATGTTAAGAATTC  763