BAC Information

Click to search

BAC

Clone NameB6Ng01-284E13
Chromosome7 (Build37)
Map Location 135,137,979 - 135,299,074
singlet/doubletdoublet
Overlap geneTrim72, LOC436010, EG668675, Itgam, Itgax
Upstream geneMvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard
Downstream geneItgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284E13.bB6Ng01-284E13.g
ACCGA083025GA083026
length7581,138
definitionB6Ng01-284E13.b B6Ng01-284E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,137,979 - 135,138,734)(135,297,945 - 135,299,074)
sequence
gaattcctaactggctttaaacatggctgggggtctactggtccatccca
gttttgatctagtcagtcttgttttataccacactgccagtttaccctta
tcttcaagctcagttcctctggagttgctttttcaattctttgcacatgc
tgttccctaaaccttgaaattgcttctctctcagacaaatgcttggctcc
tcaaccctcaggttaaatgttacttcctccgagagtccagtcttaagagt
cctccatctacccatctagatcatattgctgctagtgaacaaagctactt
ttttgtagctcttgtgcttttgtgggggaggggaggctagggaggttgtt
ataatgcccagcatgtgccaagggcccgctacctagtcaccacttaatgc
tttgcctatttatttactttagataaccttgttgtgtaagctaggctagt
cttgaactcctgatcctttttgctcagccccctgactggttggaattgga
atagcaggtgtattctaccacatctggcttaaggagcctccctcctctat
acaggatgccattctgtagccctggctgtcctggaactcgagatccacgt
gtctgcatcgcaagtgcttggatcaaggtgtgtgccactaggaccagcag
agttttaactcttgacactttacaactatggattaagttttgcagggtga
cagagtgtccatccatgtggcatggtataccagcagctattgtggttcag
atagccag
gaattcaataaaaaacagtccaaggacgttctggaagggcttaaagtcag
actcagaattaaacagaaagtgttcaaagccaaacagcaaaatggaagct
ttcattagctgttcaattctatcaaatgtgaacagaaagtttggatcgcg
gctatctcaacagcacttatttcaaagctaactccaacctttcatcatgg
agctacaggcatggcactgagtggcacctctactccaatcctccgagcag
agctgggatctaaagacgataaccctcttaagagcagagacaaagtaaat
gagataagactgagcctgagaagccccgggctgggagcggagcacgcgcg
gaggccacagccccggaggaaaagaactctctcagcagccagctgccctg
aaggggattcataggtgccggctggttccccgggcaacagcctaaagctc
tggagtaatgatcacaccctagccctgacacctgcccactgaaacctgga
ctctgttcttgtcaatactttgtctgcaagttatggcttggtcttagaca
caaaactatacttaagccaattaggaacaaagccaaattgcattttcctt
aggtctagttagatgagaataaaatctcatgtagtgacttcatcatacaa
tctttaacaaaaactcgtaagtggcattgattattcccctggaaatgaga
gagcggtggtaattcagatgtgcacctctgaaaagattgatcagtttcct
gtaccgttctatccagatagtcttgaacaccatggggagagactggaatg
gcccgccaatctgaaactgtattcgagctttgacaacgttaacagggaag
cttaagaagtcagcaaggccccgagtacacctccacgggatgaagtcgtt
gaccaggtgggcgctgtatgtagtggcagtaggcaggcgcttaatgggtt
cctggaaggtcaaaaaaaaaggacattaccgaccccattttcagaaaaag
atgggcacatggcctcttgtatacttcttgcaatccatggcattctgagc
gccctgaagacctgataagtgttttgtgacttatcatggatgtttgtggt
tctgaagcaagagtctggactcttttccgatggagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135137979_135138734
seq2: B6Ng01-284E13.b_48_805

seq1  GAATTCCTAACTGGCTTTAAACATGGCTGGGGGTCTACTGGTCCATCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTGGCTTTAAACATGGCTGGGGGTCTACTGGTCCATCCCA  50

seq1  GTTTTGATCTAGTCAGTCTTGTTTTATACCACACTGCCAGTTTACCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATCTAGTCAGTCTTGTTTTATACCACACTGCCAGTTTACCCTTA  100

seq1  TCTTCAAGCTCAGTTCCTCTGGAGTTGCTTTTTCAATTCTTTGCACATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAGCTCAGTTCCTCTGGAGTTGCTTTTTCAATTCTTTGCACATGC  150

seq1  TGTTCCCTAAACCTTGAAATTGCTTCTCTCTCAGACAAATGCTTGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTAAACCTTGAAATTGCTTCTCTCTCAGACAAATGCTTGGCTCC  200

seq1  TCAACCCTCAGGTTAAATGTTACTTCCTCCGAGAGTCCAGTCTTAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTCAGGTTAAATGTTACTTCCTCCGAGAGTCCAGTCTTAAGAGT  250

seq1  CCTCCATCTACCCATCTAGATCATATTGCTGCTAGTGAACAAAGCTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCTACCCATCTAGATCATATTGCTGCTAGTGAACAAAGCTACTT  300

seq1  TTTTGTAGCTCTTGTGCTTTTGTGGGGGAGGGGAGGCTAGGGAGGTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGCTCTTGTGCTTTTGTGGGGGAGGGGAGGCTAGGGAGGTTGTT  350

seq1  ATAATGCCCAGCATGTGCCAAGGGCCCGCTACCTAGTCACCACTTAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCCCAGCATGTGCCAAGGGCCCGCTACCTAGTCACCACTTAATGC  400

seq1  TTTGCCTATTTATTTACTTTAGATAACCTTGTTGTGTAAGCTAGGCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTATTTATTTACTTTAGATAACCTTGTTGTGTAAGCTAGGCTAGT  450

seq1  CTTGAACTCCTGATCCTTTTTGCTCAGCCCCCTGACTGGTTGGAATTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACTCCTGATCCTTTTTGCTCAGCCCCCTGACTGGTTGGAATTGGA  500

seq1  ATAGCAGGTGTATTCTACCACATCTGGCTTAAGGAGCCTCCCTCCTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGGTGTATTCTACCACATCTGGCTTAAGGAGCCTCCCTCCTCTAT  550

seq1  ACAGGATGCCATTCTGTAGCCCTGGCTGTCCTGGAACTCGAGATCCACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGCCATTCTGTAGCCCTGGCTGTCCTGGAACTCGAGATCCACGT  600

seq1  GTCTGCATCGCAAGTGCTTGGATCAAGGTGTGTGCCACTAGGACCAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCATCGCAAGTGCTTGGATCAAGGTGTGTGCCACTAGGACCAGCAG  650

seq1  AGTTTTAACTCTTGACACTTTACAACTATGGATTAAG-TTTGCAGGGTGA  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTTTTAACTCTTGACACTTTACAACTATGGATTAAGTTTTGCAGGGTGA  700

seq1  CAGAGTGTCCATCCTTGTGGCATGGTATACCAGCAGCAATTGTGG-TGAG  748
      |||||||||||||| |||||||||||||||||||||| ||||||| | ||
seq2  CAGAGTGTCCATCCATGTGGCATGGTATACCAGCAGCTATTGTGGTTCAG  750

seq1  ATAGCCAG  756
      ||||||||
seq2  ATAGCCAG  758

seq1: chr7_135297945_135299074
seq2: B6Ng01-284E13.g_68_1205 (reverse)

seq1  TCACTCCATTCG-AAAGGGTTCAGACT-TTGCTTCAGGACCACAAACAT-  47
      |||||||||  | |||| || |||||| ||||||||| ||||||||||| 
seq2  TCACTCCATCGGAAAAGAGTCCAGACTCTTGCTTCAGAACCACAAACATC  50

seq1  CATGATAAGTTCAC-AAACACTTATCAGGTCTTCAGGGCGCTCAG-ATGC  95
      ||||||||| |||| |||||||||||||||||||||||||||||| ||||
seq2  CATGATAAG-TCACAAAACACTTATCAGGTCTTCAGGGCGCTCAGAATGC  99

seq1  CATGGGATTGCA--GAGTATTACAGAGGCATGGTGCCCATCCTTTTCTG-  142
      ||| ||||||||   |||||   ||||||   ||||||||| ||||||| 
seq2  CAT-GGATTGCAAGAAGTATACAAGAGGCCATGTGCCCATCTTTTTCTGA  148

seq1  AAATGGGTTCGGTAATGTCCTTTTTTTTTGACCTTCCAGG-ACCCATTAA  191
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  AAATGGGGTCGGTAATGTCCTTTTTTTTTGACCTTCCAGGAACCCATTAA  198

seq1  GCGCCTGCCTACTGCCACTACATACAGCGCCCACCTGGTCAACGACTTCA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGCCTACTGCCACTACATACAGCGCCCACCTGGTCAACGACTTCA  248

seq1  T-CCGTGGAGGTGTACTCGGGGCCTTGCTGACTTCTTAAGCTTCCCTGTT  290
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGGAGGTGTACTCGGGGCCTTGCTGACTTCTTAAGCTTCCCTGTT  298

seq1  AACGTTGTCAAAGCTCGAATACAGTTTCAGATTGGCGGGCCATTCCAGTC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTGTCAAAGCTCGAATACAGTTTCAGATTGGCGGGCCATTCCAGTC  348

seq1  TCTCCCCATGGTGTTCAAGACTATCTGGATAGAACGGTACAGGAAACTGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCATGGTGTTCAAGACTATCTGGATAGAACGGTACAGGAAACTGA  398

seq1  TCAATCTTTTCAGAGGTGCACATCTGAATTACCACCGCTCTCTCATTTCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTTTCAGAGGTGCACATCTGAATTACCACCGCTCTCTCATTTCC  448

seq1  AGGGGAATAATCAATGCCACTTACGAGTTTTTGTTAAAGATTGTATGATG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATAATCAATGCCACTTACGAGTTTTTGTTAAAGATTGTATGATG  498

seq1  AAGTCACTACATGAGATTTTATTCTCATCTAACTAGACCTAAGGAAAATG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTACATGAGATTTTATTCTCATCTAACTAGACCTAAGGAAAATG  548

seq1  CAATTTGGCTTTGTTCCTAATTGGCTTAAGTATAGTTTTGTGTCTAAGAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGCTTTGTTCCTAATTGGCTTAAGTATAGTTTTGTGTCTAAGAC  598

seq1  CAAGCCATAACTTGCAGACAAAGTATTGACAAGAACAGAGTCCAGGTTTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCATAACTTGCAGACAAAGTATTGACAAGAACAGAGTCCAGGTTTC  648

seq1  AGTGGGCAGGTGTCAGGGCTAGGGTGTGATCATTACTCCAGAGCTTTAGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCAGGTGTCAGGGCTAGGGTGTGATCATTACTCCAGAGCTTTAGG  698

seq1  CTGTTGCCCGGGGAACCAGCCGGCACCTATGAATCCCCTTCAGGGCAGCT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCCCGGGGAACCAGCCGGCACCTATGAATCCCCTTCAGGGCAGCT  748

seq1  GGCTGCTGAGAGAGTTCTTTTCCTCCGGGGCTGTGGCCTCCGCGCGTGCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGAGAGAGTTCTTTTCCTCCGGGGCTGTGGCCTCCGCGCGTGCT  798

seq1  CCGCTCCCAGCCCGGGGCTTCTCAGGCTCAGTCTTATCTCATTTACTTTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCCCAGCCCGGGGCTTCTCAGGCTCAGTCTTATCTCATTTACTTTG  848

seq1  TCTCTGCTCTTAAGAGGGTTATCGTCTTTAGATCCCAGCTCTGCTCGGAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTCTTAAGAGGGTTATCGTCTTTAGATCCCAGCTCTGCTCGGAG  898

seq1  GATTGGAGTAGAGGTGCCACTCAGTGCCATGCCTGTAGCTCCATGATGAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAGTAGAGGTGCCACTCAGTGCCATGCCTGTAGCTCCATGATGAA  948

seq1  AGGTTGGAGTTAGCTTTGAAATAAGTGCTGTTGAGATAGCCGCGATCCAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGAGTTAGCTTTGAAATAAGTGCTGTTGAGATAGCCGCGATCCAA  998

seq1  ACTTTCTGTTCACATTTGATAGAATTGAACAGCTAATGAAAGCTTCCATT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGTTCACATTTGATAGAATTGAACAGCTAATGAAAGCTTCCATT  1048

seq1  TTGCTGTTTGGCTTTGAACACTTTCTGTTTAATTCTGAGTCTGACTTTAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTTGGCTTTGAACACTTTCTGTTTAATTCTGAGTCTGACTTTAA  1098

seq1  GCCCTTCCAGAACGTCCTTGGACTGTTTTTTATTGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCCAGAACGTCCTTGGACTGTTTTTTATTGAATTC  1138