BAC Information

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BAC

Clone NameB6Ng01-284J12
Chromosome7 (Build37)
Map Location 14,156,501 - 14,321,067
singlet/doubletdoublet
Overlap geneEG666256, LOC666267, LOC100042624, LOC100043194
Upstream geneEG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik
Downstream geneSult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284J12.bB6Ng01-284J12.g
ACCGA083256GA083257
length1,1631,041
definitionB6Ng01-284J12.b B6Ng01-284J12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,319,904 - 14,321,067)(14,156,501 - 14,157,536)
sequence
gaattcatctcttaaagcttcagtttccctggtcaaaattttccaaatcc
agataagacacacacatatatatgaatggccgcaaacattttaccatttc
agtgagagattattctaagtttgtctttgtagttgcagcataaacttttt
atagtttttatggatggaggaatttacacaaaactttcttactaactagc
acctgtgaaaggtcagattgtagatatctctgattccttctactgatcct
ctttccatttcatgggagattcctgtagctactgatctcaataaacagct
acacacgtgatgactctgtatatataactgatctttgaacattgatgcct
agtcagttttcttcccctatgagcaattgtgtcttaggtgtttcacccac
agggcttagcttataacttatataagtaagattagttttttgatgacaat
gatatagtaatatccattgtacattagagattgaattctgtttggcatat
atatatatatatatatatatatatatatatatcatgaatgtttcagtgtg
atatttcactttatttcttacagctgcccaggatcactgtgtgctggtcc
acaaccttgcactctatctaatatagtttgaggtggggaaacatcagcat
cacctagtgcatgagaatcccatcttcacatttcagcaagaactccagga
cttgtcaggtaaaataagttgaaagagtgtttagtcaaagaaaatctcaa
tcactggacactgaccttggccttggaactgaagaaagacttggagaaga
gatggatgggaagatgggaggttatgagtcgtggtccttccttatttgat
tattgcaggatatcctatttcagtctctatccagggtgagcggtcccaaa
tgggcacagtttggatccacttcggatctcccttgggtctgaatcaaagc
atacaatctcattcagccagttcgttcctgaatgaaaggaaaagtgactg
tcactcatttcaacaattacttgtgaaaaagccctcaggtacatatatgc
ccatacaattacaggtgctgccccatttcagccaacagactgtgttcaca
atgtcgtgtgacatagtgccaaacgatatccatcatcatattcctgactc
acttgctaaacag
gaattctttgtcctaaatttcatagagttattcaacacattagaaacatc
tactttaaaatgttctatggtgtcatagtgttgtcttttggggaggtttt
ggttttgctaacatgccagccaatctgaaaactttgttatgttatttttg
atctctgtctttttctctttaagacataaaatagttaagttatacccatc
tattcttttgaaatcattgactttgtgcagttacagaactcattccatat
gtatagaaaaccaggaaatagcaactcagaagacaaaatttattttcttt
ttaaacattgccacccaagtaactctagagagatgattttacattcggaa
cccaatttgggagagaaatgggtgctctttttgattatgattttccatca
tagcacgatctcaaatcagaactatcacaattcaataaacatacatttct
cagaataaaagagcctttcccatatctcttatttatagaatgatatttgt
ggctgggagttatgacatccttgaaatatctttttcctgctttgttgaaa
aatattcttctagtcctctttactatggtcataactttccccaaagacaa
gcagatatgatcctgaatattcatgaagttatggaaattatgataaacat
atacataatgagtgaggcatgctccaaagatttgcctcatgttacatgct
aaaggacattttgatctgagactagaacatcccgccctgtgtaaaaactg
taacgagcaccagaaagaacctattatcccttttttgctcgactggagag
ttattatgtcctggggctctggtcacttgtactgaaaggtaatattttct
gattttctcaggaacaggactggtattttattgatagtattaggtagagt
gaagtgattttaaaaagtaaattttacccaagttggcagagctttactaa
agtggcagagctggaattaaattcccaaagaatctattatgaatactact
ttgaaggttcgatgacaataccagtgattctggatacacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14319904_14321067
seq2: B6Ng01-284J12.b_45_1207 (reverse)

seq1  CTGTTTTGCAAGTGAAGTCTAGAATATGATGAGTGAATATACGTTT-GCA  49
      |||||| ||||||| ||||  ||||||||||| || |||| ||||| |||
seq2  CTGTTTAGCAAGTG-AGTCAGGAATATGATGA-TGGATAT-CGTTTGGCA  47

seq1  CTTATGTCACACAGACATTGTGAACACAAGTCTGTGTGCTTGAAATTGGG  99
      | |||||||||| |||||||||||||| ||||||| ||  |||||| |||
seq2  C-TATGTCACAC-GACATTGTGAACAC-AGTCTGT-TGGCTGAAATGGGG  93

seq1  CAGCA-CTGTAAATTGTATGGGCATATATTGTACTTGA-GGCTTTTTCAC  147
      ||||| |||| ||||||||||||||||| ||||| ||| |||||||||||
seq2  CAGCACCTGT-AATTGTATGGGCATATA-TGTACCTGAGGGCTTTTTCAC  141

seq1  AAGTAA-TGTTGAAATGAGTGACAGTCACTTTTCCTTTTCATTCAGGAAC  196
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGTAATTGTTGAAATGAGTGACAGTCACTTTTCC-TTTCATTCAGGAAC  190

seq1  GAACTGGCTGAATGAGATTGTATGC-TTGATTCAGA-CCAAGGGAGATCC  244
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  GAACTGGCTGAATGAGATTGTATGCTTTGATTCAGACCCAAGGGAGATCC  240

seq1  GAAGTGGATCCAAACTGTGCCCATTTGGGACCGCTCACCCTGGATAGAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATCCAAACTGTGCCCATTTGGGACCGCTCACCCTGGATAGAGA  290

seq1  CTGAAATAGGATATCCTGCAATAATC-AATAAGGAAGGACCACGACTCAT  343
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGAAATAGGATATCCTGCAATAATCAAATAAGGAAGGACCACGACTCAT  340

seq1  AACCTCCCATCTTCCCATCCATCTCTTCTCCAAGTCTTTCTTCAGTTCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCCATCTTCCCATCCATCTCTTCTCCAAGTCTTTCTTCAGTTCCA  390

seq1  AGGCCAAGGTCAGTGTCCAGTGATTGAGATTTTCTTTGACTAAACACTCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAGGTCAGTGTCCAGTGATTGAGATTTTCTTTGACTAAACACTCT  440

seq1  TTCAACTTATTTTACCTGACAAGTCCTGGAGTTCTTGCTGAAATGTGAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTATTTTACCTGACAAGTCCTGGAGTTCTTGCTGAAATGTGAAG  490

seq1  ATGGGATTCTCATGCACTAGGTGATGCTGATGTTTCCCCACCTCAAACTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTCTCATGCACTAGGTGATGCTGATGTTTCCCCACCTCAAACTA  540

seq1  TATTAGATAGAGTGCAAGGTTGTGGACCAGCACACAGTGATCCTGGGCAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATAGAGTGCAAGGTTGTGGACCAGCACACAGTGATCCTGGGCAG  590

seq1  CTGTAAGAAATAAAGTGAAATATCACACTGAAACATTCATG--ATATATA  641
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  CTGTAAGAAATAAAGTGAAATATCACACTGAAACATTCATGATATATATA  640

seq1  TATATATATATATATATATATATATATGCCAAACAGAATTCAATCTCTAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATGCCAAACAGAATTCAATCTCTAA  690

seq1  TGTACAATGGATATTACTATATCATTGTCATCAAAAAACTAATCTTACTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAATGGATATTACTATATCATTGTCATCAAAAAACTAATCTTACTT  740

seq1  ATATAAGTTATAAGCTAAGCCCTGTGGGTGAAACACCTAAGACACAATTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTTATAAGCTAAGCCCTGTGGGTGAAACACCTAAGACACAATTG  790

seq1  CTCATAGGGGAAGAAAACTGACTAGGCATCAATGTTCAAAGATCAGTTAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGGGGAAGAAAACTGACTAGGCATCAATGTTCAAAGATCAGTTAT  840

seq1  ATATACAGAGTCATCACGTGTGTAGCTGTTTATTGAGATCAGTAGCTACA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGAGTCATCACGTGTGTAGCTGTTTATTGAGATCAGTAGCTACA  890

seq1  GGAATCTCCCATGAAATGGAAAGAGGATCAGTAGAAGGAATCAGAGATAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCCCATGAAATGGAAAGAGGATCAGTAGAAGGAATCAGAGATAT  940

seq1  CTACAATCTGACCTTTCACAGGTGCTAGTTAGTAAGAAAGTTTTGTGTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATCTGACCTTTCACAGGTGCTAGTTAGTAAGAAAGTTTTGTGTAA  990

seq1  ATTCCTCCATCCATAAAAACTATAAAAAGTTTATGCTGCAACTACAAAGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCCATCCATAAAAACTATAAAAAGTTTATGCTGCAACTACAAAGA  1040

seq1  CAAACTTAGAATAATCTCTCACTGAAATGGTAAAATGTTTGCGGCCATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTAGAATAATCTCTCACTGAAATGGTAAAATGTTTGCGGCCATTC  1090

seq1  ATATATATGTGTGTGTCTTATCTGGATTTGGAAAATTTTGACCAGGGAAA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTGTGTGTCTTATCTGGATTTGGAAAATTTTGACCAGGGAAA  1140

seq1  CTGAAGCTTTAAGAGATGAATTC  1164
      |||||||||||||||||||||||
seq2  CTGAAGCTTTAAGAGATGAATTC  1163

seq1: chr7_14156501_14157536
seq2: B6Ng01-284J12.g_69_1109

seq1  GAATTCTTTGTCCTAAATTTCATAGAGTTATTCAACACATTAGAAACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCCTAAATTTCATAGAGTTATTCAACACATTAGAAACATC  50

seq1  TACTTTAAAATGTTCTATGGTGTCATAGTGTTGTCTTTTGGGGAGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAAATGTTCTATGGTGTCATAGTGTTGTCTTTTGGGGAGGTTTT  100

seq1  GGTTTTGCTAACATGCCAGCCAATCTGAAAACTTTGTTATGTTATTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCTAACATGCCAGCCAATCTGAAAACTTTGTTATGTTATTTTTG  150

seq1  ATCTCTGTCTTTTTCTCTTTAAGACATAAAATAGTTAAGTTATACCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTCTTTTTCTCTTTAAGACATAAAATAGTTAAGTTATACCCATC  200

seq1  TATTCTTTTGAAATCATTGACTTTGTGCAGTTACAGAACTCATTCCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTGAAATCATTGACTTTGTGCAGTTACAGAACTCATTCCATAT  250

seq1  GTATAGAAAACCAGGAAATAGCAACTCAGAAGACAAAATTTATTTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAAAACCAGGAAATAGCAACTCAGAAGACAAAATTTATTTTCTTT  300

seq1  TTAAACATTGCCACCCAAGTAACTCTAGAGAGATGATTTTACATTCGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATTGCCACCCAAGTAACTCTAGAGAGATGATTTTACATTCGGAA  350

seq1  CCCAATTTGGGAGAGAAATGGGTGCTCTTTTTGATTATGATTTTCCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTTGGGAGAGAAATGGGTGCTCTTTTTGATTATGATTTTCCATCA  400

seq1  TAGCACGATCTCAAATCAGAACTATCACAATTCAATAAACATACATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACGATCTCAAATCAGAACTATCACAATTCAATAAACATACATTTCT  450

seq1  CAGAATAAAAGAGCCTTTCCCATATCTCTTATTTATAGAATGATATTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAAAGAGCCTTTCCCATATCTCTTATTTATAGAATGATATTTGT  500

seq1  GGCTGGGAGTTATGACATCCTTGAAATATCTTTTTCCTGCTTTGTTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGAGTTATGACATCCTTGAAATATCTTTTTCCTGCTTTGTTGAAA  550

seq1  AATATTCTTCTAGTCCTCTTTACTATGGTCATAACTTTCCCCAAAGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTTCTAGTCCTCTTTACTATGGTCATAACTTTCCCCAAAGACAA  600

seq1  GCAGATATGATCCTGAATATTCATGAAGTTATGGAAATTATGATAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATATGATCCTGAATATTCATGAAGTTATGGAAATTATGATAAACAT  650

seq1  ATACATAATGAGTGAGGCATGCTCCAAAGATTTGCCTCATGTTACATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAATGAGTGAGGCATGCTCCAAAGATTTGCCTCATGTTACATGCT  700

seq1  AAAGGACATTTTGATCTGAGACTAGAACATCCCGCCCTGTGTAAAAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACATTTTGATCTGAGACTAGAACATCCCGCCCTGTGTAAAAACTG  750

seq1  TAACGAGCACCAGAAAGAACCTATTATCCCTTTTTTGCTCGACTGGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAGCACCAGAAAGAACCTATTATCCCTTTTTTGCTCGACTGGAGAG  800

seq1  TTATTATGTCCTGGGGCTCTGGTCACTTGTACTG-AAGGTAATATTTTCT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATTATGTCCTGGGGCTCTGGTCACTTGTACTGAAAGGTAATATTTTCT  850

seq1  GATTTTCTCAGGAACAGGACTGGTATTTTATTGATAGTATTAGGTAGAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTCAGGAACAGGACTGGTATTTTATTGATAGTATTAGGTAGAGT  900

seq1  GAAGTGATTTTAAAAAGTAAAATTTTACCCAAG-TGGCAGAGC-TTAC-A  946
      |||||||||||||||||| |||||||||||||| ||||||||| |||| |
seq2  GAAGTGATTTTAAAAAGT-AAATTTTACCCAAGTTGGCAGAGCTTTACTA  949

seq1  AAGTGGCAGAGCTGAAATTAAA-TCCCAAAGAATCTA-TATGAATACTAC  994
      |||||||||||||| ||||||| |||||||||||||| ||||||||||||
seq2  AAGTGGCAGAGCTGGAATTAAATTCCCAAAGAATCTATTATGAATACTAC  999

seq1  ATTTTAAGG-TCGATGACAATTACCAGTGATTCT-GATACACAA  1036
       ||| |||| |||||||||| ||||||||||||| |||||||||
seq2  -TTTGAAGGTTCGATGACAA-TACCAGTGATTCTGGATACACAA  1041