BAC Information

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BAC

Clone NameB6Ng01-284J21
Chromosome7 (Build37)
Map Location 125,736,786 - 125,873,151
singlet/doubletdoublet
Overlap geneB230311B06Rik, Tmc5, Mir16, 6330503K22Rik
Upstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7
Downstream gene9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284J21.bB6Ng01-284J21.g
ACCGA083274GA083275
length1,1201,092
definitionB6Ng01-284J21.b B6Ng01-284J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,736,786 - 125,737,919)(125,872,065 - 125,873,151)
sequence
gaattcatcaaaatacaaggtcagaacctgcagtatctaactgtgagcaa
tctgtcacacacacagcaggatggaatgtctcattaatcatgaggtgatt
cgaactccaatcaggacgactgtggcgactagccaccacagggagttaag
gaggtttctatctaggctgagctgatgaaactgtcactgcagatagatca
ggtgacagataccatctaggaaggaggcccactcagtgaggggcagcagg
tattagggctccttcttcctaaatgactgtgcaaggctctctggcaacac
tagagttcacaggggagaatacaggcaggctctggagttggttaggagcc
ttacagttaggctacacaaagaatcttagtcatctctgttcagctcagat
ctaagaggcagaggcagggcactgagctcagagttatatgtaaatctgag
tctagagaggacccgctgagctttctaggttcgtaagtcccagaacaaat
aattggaccagggtgagaaaaaagtagaggtgctgatggacccccacctg
ggagtgtggtgagtctctaaggcctctcctctcgggagagtgccttgggt
gagcttggtttgttcctcatagccctggtgagggaggagttcccaggcct
tccgccaactggcttctttcatatgctaatctcccctccagccctattct
gccaacagttgctgtaacagaagaccacccctcctcccaaattgggtgct
ttatatagaaaaaaatatatcgttcacacagtctccagctgggaagggac
atctgttcagtgaagaggaacaaatacagcttctggaacattcctgtgaa
gcaaattgcctgggtgcttcaaagatatcaatagctggagtgggggcggg
gcagggcagggtgaggtgggaaagctctgtaaagctcttgcatagtaaca
ggaggtcctgagttccacccccaaccctggggggtggggcaggaacaaca
gagtcggggtttgctgaagcagggagagagggacactggaactaagtaga
gtacatggaacttgattgttcacagcgacctcctctgcttgtcgttgggt
ctgctattagtgccgagcag
gaattccatggtgtcctgaaagaaagagaccagtttctaggaagtttcct
tttattctttctccatcaaaaattactaagaacacaaaaatgattactga
tgacatatcaagcagccatagccccctccccatgtttccctgcctcctcc
tgcccagaacggcagagggaccgcaaactctgacgctgtgccgttcaggc
tggcttctgtatcctctccgtcagggaggccacgtgacctgctcaggtgg
ttctggaagagcagtcatttgaacctccattattactcacatgtggtgtc
caggaccttaacggcccatctgtgagaacatttgtgtgtcacagtgaatg
ccaagtctgaaggatctaaaacctctggtactggtgaaaaggcaggcagt
cacaatccttgaccacactgctgaatttacaattgtccctagtgataaac
agggcctggagggagcgcccactgcaatattcagacactaaagataaaga
ggataaccagcggaggagcctgacaaggaagtacatgcagggactatagg
gccagtcctatagctgcgacctacggggacttccccatctatcaaaaagc
cacgctgtagagcagaagaatgcagcccagggtgggacagaggctcactg
ccagagcctggatgggctgggacagataaatggcagcaggagaatgcccg
tgatgagtaagatggcctgtgctgctgtaagactgctcaggctggggatg
gtgacccatagctgggaccagcaatgaaaaggctcaaacagggctgccat
gagtttgaggccagcttgagatagagtgagaccatgtctccaaaaataaa
taaatactttgtggaagaaaaccgtgaatttgccccactcgggagtggat
gatttaagtcattttctttctttttaaaaaatattatttatttatttatt
tatttaatacatatgagtacactggtggctctcttcaggacacatcagga
aagggcatcagatcccattaacaaattggtggtgagcccccatggtgatg
gttaggaattaactccagatctctggaaaagcaagttggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125736786_125737919
seq2: B6Ng01-284J21.b_48_1167

seq1  GAATTCATCAAAATACAAGGTCAGAACCTGCAGTATCTAACTGTGAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAAATACAAGGTCAGAACCTGCAGTATCTAACTGTGAGCAA  50

seq1  TCTGTCACACACACAGCAGGATGGAATGTCTCATTAATCATGAGGTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACACACACAGCAGGATGGAATGTCTCATTAATCATGAGGTGATT  100

seq1  CGAACTCCAATCAGGACGACTGTGGCGACTAGCCACCACAGGGAGTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTCCAATCAGGACGACTGTGGCGACTAGCCACCACAGGGAGTTAAG  150

seq1  GAGGTTTCTATCTAGGCTGAGCTGATGAAACTGTCACTGCAGATAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCTATCTAGGCTGAGCTGATGAAACTGTCACTGCAGATAGATCA  200

seq1  GGTGACAGATACCATCTAGGAAGGAGGCCCACTCAGTGAGGGGCAGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGATACCATCTAGGAAGGAGGCCCACTCAGTGAGGGGCAGCAGG  250

seq1  TATTAGGGCTCCTTCTTCCTAAATGACTGTGCAAGGCTCTCTGGCAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGGCTCCTTCTTCCTAAATGACTGTGCAAGGCTCTCTGGCAACAC  300

seq1  TAGAGTTCACAGGGGAGAATACAGGCAGGCTCTGGAGTTGGTTAGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTCACAGGGGAGAATACAGGCAGGCTCTGGAGTTGGTTAGGAGCC  350

seq1  TTACAGTTAGGCTACACAAAGAATCTTAGTCATCTCTGTTCAGCTCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTAGGCTACACAAAGAATCTTAGTCATCTCTGTTCAGCTCAGAT  400

seq1  CTAAGAGGCAGAGGCAGGGCACTGAGCTCAGAGTTATATGTAAATCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGCAGAGGCAGGGCACTGAGCTCAGAGTTATATGTAAATCTGAG  450

seq1  TCTAGAGAGGACCCGCTGAGCTTTCTAGGTTCGTAAGTCCCAGAACAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGAGGACCCGCTGAGCTTTCTAGGTTCGTAAGTCCCAGAACAAAT  500

seq1  AATTGGACCAGGGTGAGAAAAAAGTAGAGGTGCTGATGGACCCCCACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACCAGGGTGAGAAAAAAGTAGAGGTGCTGATGGACCCCCACCTG  550

seq1  GGAGTGTGGTGAGTCTCTAAGGCCTCTCCTCTCGGGAGAGTGCCTTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTGGTGAGTCTCTAAGGCCTCTCCTCTCGGGAGAGTGCCTTGGGT  600

seq1  GAGCTTGGTTTGTTCCTCATAGCCCTGGTGAGGGAGGAGTTCCCAGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGTTTGTTCCTCATAGCCCTGGTGAGGGAGGAGTTCCCAGGCCT  650

seq1  TCCGCCAACTGGCTTCTTTCATATGCTAATCTCCCCTCCAGCCCTATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCAACTGGCTTCTTTCATATGCTAATCTCCCCTCCAGCCCTATTCT  700

seq1  GCCAACAGTTGCTGTAACAGAAGACCACCCCTCCTCCCAAATTGGGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACAGTTGCTGTAACAGAAGACCACCCCTCCTCCCAAATTGGGTGCT  750

seq1  TTATATAGAAAAAAATATATCGTTCACACAGTCTCCAGCTGGGAAGGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGAAAAAAATATATCGTTCACACAGTCTCCAGCTGGGAAGGGAC  800

seq1  ATCTGTTCAGTGAAGAGGAACAAATACAGCTTCTGGAACATTCCTGTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCAGTGAAGAGGAACAAATACAGCTTCTGGAACATTCCTGTGAA  850

seq1  GCAAATTGCCTGGGTGCTTCAAAGATATCAATAGCTGGAGTGGGGGCGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTGCCTGGGTGCTTCAAAGATATCAATAGCTGGAGTGGGGGCGGG  900

seq1  GCAGGGGCAGGGGTGAGGTGGG-AAGCTCTGTAAAGCTCTTGCATAGTAA  949
      ||| ||||| |||||||||||| ||||||||||||||||||||||||| |
seq2  GCA-GGGCA-GGGTGAGGTGGGAAAGCTCTGTAAAGCTCTTGCATAGT-A  947

seq1  ACAGGAGGTCCTGAGTTCCACCCCCAACCCTGGGGGGTGGGGCAAGGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||  | ||
seq2  ACAGGAGGTCCTGAGTTCCACCCCCAACCCTGGGGGGTGGGGCA--GGAA  995

seq1  CAACAAGAGTCGGGGTTGGCTGAAGCAAGGGAGGAGGAGGGGACAACTGG  1049
      |||| |||||||||||| |||||||| ||||| |||   ||||| |||||
seq2  CAAC-AGAGTCGGGGTTTGCTGAAGC-AGGGA-GAG--AGGGAC-ACTGG  1039

seq1  ACTAAAGTAGAGTAACATGGAAC-TGATGGTTCACAGCCGACCTCCTCTG  1098
      |   ||||||||| ||||||||| |||| |||||||| ||||||||||||
seq2  AACTAAGTAGAGT-ACATGGAACTTGATTGTTCACAG-CGACCTCCTCTG  1087

seq1  CTTTCCTCTGTTGGTGCTGGCTATTAGTG-CGAGCAG  1134
      |||  |   |||||  || |||||||||| |||||||
seq2  CTTGTC---GTTGGGTCT-GCTATTAGTGCCGAGCAG  1120

seq1: chr7_125872065_125873151
seq2: B6Ng01-284J21.g_68_1159 (reverse)

seq1  GCACCAAC-TGCTTTTCCAGAGGTCCTGAGTTAAATTCCTAACAACCA-C  48
      |||||||| ||||||||||||| ||  ||||| |||||||||| | || |
seq2  GCACCAACTTGCTTTTCCAGAGATCTGGAGTT-AATTCCTAACCATCACC  49

seq1  ATGGGGGCTCACAACC-ATTTG-TAATGGGATCTGATGCCCTTTCCTGAT  96
      |||||||||||| ||| ||||| |||||||||||||||||||||||||||
seq2  ATGGGGGCTCACCACCAATTTGTTAATGGGATCTGATGCCCTTTCCTGAT  99

seq1  GTGT-CTGAAGAGAGCCA-CAGTGTACTCATATGTATTAAATAAATAAAT  144
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTGTCCTGAAGAGAGCCACCAGTGTACTCATATGTATTAAATAAATAAAT  149

seq1  AAATAAATAAATATTTTTTAAAAAGAAAGAAAATGACTTAAATCATCCAC  194
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAT-AATATTTTTTAAAAAGAAAGAAAATGACTTAAATCATCCAC  198

seq1  TCCCGAGT-GGGCAAATTCACGGTTTTCTTCCACAAAGTATTTATTTATT  243
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGTGGGGCAAATTCACGGTTTTCTTCCACAAAGTATTTATTTATT  248

seq1  TTTGGAGACATGGTCTCACTCTATCTCAAGCTGGCCTCAAACTCATGGCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGACATGGTCTCACTCTATCTCAAGCTGGCCTCAAACTCATGGCA  298

seq1  GCCCTGTTTGAGCCTTTTCATTGCTGGTCCCAGCTATGGGTCACCATCCC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTTTGAGCCTTTTCATTGCTGGTCCCAGCTATGGGTCACCATCCC  348

seq1  CAGCCTGAGCAGTCTTACAGCAGCACAGGCCATCTTACTCATCACGGGCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGAGCAGTCTTACAGCAGCACAGGCCATCTTACTCATCACGGGCA  398

seq1  TTCTCCTGCTGCCATTTATCTGTCCCAGCCCATCCAGGCTCTGGCAGTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGCTGCCATTTATCTGTCCCAGCCCATCCAGGCTCTGGCAGTGA  448

seq1  GCCTCTGTCCCACCCTGGGCTGCATTCTTCTGCTCTACAGCGTGGCTTTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTCCCACCCTGGGCTGCATTCTTCTGCTCTACAGCGTGGCTTTT  498

seq1  TGATAGATGGGGAAGTCCCCGTAGGTCGCAGCTATAGGACTGGCCCTATA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATGGGGAAGTCCCCGTAGGTCGCAGCTATAGGACTGGCCCTATA  548

seq1  GTCCCTGCATGTACTTCCTTGTCAGGCTCCTCCGCTGGTTATCCTCTTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCATGTACTTCCTTGTCAGGCTCCTCCGCTGGTTATCCTCTTTA  598

seq1  TCTTTAGTGTCTGAATATTGCAGTGGGCGCTCCCTCCAGGCCCTGTTTAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTGTCTGAATATTGCAGTGGGCGCTCCCTCCAGGCCCTGTTTAT  648

seq1  CACTAGGGACAATTGTAAATTCAGCAGTGTGGTCAAGGATTGTGACTGCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGGACAATTGTAAATTCAGCAGTGTGGTCAAGGATTGTGACTGCC  698

seq1  TGCCTTTTCACCAGTACCAGAGGTTTTAGATCCTTCAGACTTGGCATTCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTCACCAGTACCAGAGGTTTTAGATCCTTCAGACTTGGCATTCA  748

seq1  CTGTGACACACAAATGTTCTCACAGATGGGCCGTTAAGGTCCTGGACACC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACACACAAATGTTCTCACAGATGGGCCGTTAAGGTCCTGGACACC  798

seq1  ACATGTGAGTAATAATGGAGGTTCAAATGACTGCTCTTCCAGAACCACCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGAGTAATAATGGAGGTTCAAATGACTGCTCTTCCAGAACCACCT  848

seq1  GAGCAGGTCACGTGGCCTCCCTGACGGAGAGGATACAGAAGCCAGCCTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGTCACGTGGCCTCCCTGACGGAGAGGATACAGAAGCCAGCCTGA  898

seq1  ACGGCACAGCGTCAGAGTTTGCGGTCCCTCTGCCGTTCTGGGCAGGAGGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCACAGCGTCAGAGTTTGCGGTCCCTCTGCCGTTCTGGGCAGGAGGA  948

seq1  GGCAGGGAAACATGGGGAGGGGGCTATGGCTGCTTGATATGTCATCAGTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAAACATGGGGAGGGGGCTATGGCTGCTTGATATGTCATCAGTA  998

seq1  ATCATTTTTGTGTTCTTAGTAATTTTTGATGGAGAAAGAATAAAAGGAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTGTGTTCTTAGTAATTTTTGATGGAGAAAGAATAAAAGGAAA  1048

seq1  CTTCCTAGAAACTGGTCTCTTTCTTTCAGGACACCATGGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAGAAACTGGTCTCTTTCTTTCAGGACACCATGGAATTC  1092