BAC Information

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BAC

Clone NameB6Ng01-284O01
Chromosome7 (Build37)
Map Location 51,370,118 - 51,508,957
singlet/doubletdoublet
Overlap geneKlk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt
Upstream geneLOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21
Downstream geneLOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62, Il4i1, Tbc1d17, Akt1s1, Pnkp, Ptov1, Med25, Fuz, Ap2a1, Stk22s1, Cpt1c, Prmt1, Bcl2l12, Irf3, AI480556, Rras, Prr12, Prrg2, Nosip, Rcn3, Fcgrt, Rps11, Rnu35b, Rpl13a, Rnu35a, Rnu34, Rnu33, Rnu32, Flt3l, Aldh16a1, Pih1d1, Slc17a7, Gm581, LOC100039953, Tifp39, BC050196, Dkkl1, Tead2, Cd37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284O01.bB6Ng01-284O01.g
ACCGA083471GA083472
length758816
definitionB6Ng01-284O01.b B6Ng01-284O01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,508,203 - 51,508,957)(51,370,118 - 51,370,928)
sequence
gaattccgggggagctccagggaacccgaggaggaagatggagagtgagg
atgggtgatggcttggcattgggtggatgggctcttcttcggatggggaa
ctagtgatgctactgtcctttccacctccaggaatgtcactgtctctctc
atctaccgcaatgacacctcccgcccacccctgccactcagggtccctgg
gtgcccagctccctgtccacttgggcgcttccagcagctgactgctccag
cccggcctccagcccatggggccccctgccatggttcttatgagcctgcc
agccccccaggtgacagccctctacgctggggtgggagtggggagttccc
aaggcctgggattcacaacccccatgttcttcctgcagccacggtgcccc
tgctggccggagctgtggctgtgctggccgtgctaagcctggggcttggt
cttctggcctggaggcccagatgcctgcgggccctgggagggactgtgtg
aggggggatgaatagacacaaaaataccccgagctgacactggatcccaa
cacgtgtgctcacttgctgctctggcttgtcacttactgtgctcatgcgc
gtgtggggatgaaggctgggtgggcctcaagcattatgctttgcttggac
actgcaatcaggtgttgtacatacaggtgtcggggctcacaataaccacg
tgtgcaggtggggaacctgtagcctgagaagcacacaggactcaattgcc
ttaagcaa
gaattcccaaccctggcaggtggctgtgtactacttagatgagtacctat
gcgggggagtcctgttggaccgcaactgggttctcacagctgcccactgc
tatgaagagtaagtaaaggtggagacaggaaagcaagatggcagccagag
atcatgactccaggacaggctggggtactgaagggcaggggagtgggact
ggctgaaactatccatgacctcctgggtctctctttactccatcctccag
gtttgtgttcagagtcctgtttctttttttttttctctcttattatctgt
ctctctcctgtctgtattcacatatgagtgtctccgtggccatctgtcac
tgtgtatctctgccttgggacactgggcacaaactttctggttctgggtc
tcatgtgtcctcttatatcactactgaccatagtggggaccaggcctaaa
gggcccctgaggatagagagtgctgtccctgagggtaggctgtgagagaa
gtcctcactctcctcagagcagctctgcctttaggaccttctgtccactc
tgaggacacacagagaagagctggtcaggactggagctgggtgaggtaac
tgagtacagagagagctggatgctggggagggaggggagggttcagacct
tgggctgcaggccaggccttacctgctggggaagttcagccctgtcctag
ctgcacctgagcagatttttaggccctaccctttctaccccttgtcttct
gttcctgtatttgctctctctgccctctctaaatctatttggatgtatga
tatgcatgtatgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51508203_51508957
seq2: B6Ng01-284O01.b_46_803 (reverse)

seq1  TTGCTTAAGGCAATTGAGTCCTGTGTGC-TCTCAGGCTACAGGTT-CCCA  48
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  TTGCTTAAGGCAATTGAGTCCTGTGTGCTTCTCAGGCTACAGGTTCCCCA  50

seq1  CCTGCACACGTGCTTATTGTGAGCCCCGACACCTGTATGTACAACACCTG  98
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTGCACACGTGGTTATTGTGAGCCCCGACACCTGTATGTACAACACCTG  100

seq1  ATTGCAGTGTCCAAGC-AAGCATAATGCTTGAGGCCCACCCAGCCTTCAT  147
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTGCAGTGTCCAAGCAAAGCATAATGCTTGAGGCCCACCCAGCCTTCAT  150

seq1  CCCCACACGCGCATGAGCACAGTAAGTGACAAGCCAGAGCAGCAAGTGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACACGCGCATGAGCACAGTAAGTGACAAGCCAGAGCAGCAAGTGAG  200

seq1  CACACGTGTTGGGATCCAGTGTCAGCTCGGGGTATTTTTGTGTCTATTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTGTTGGGATCCAGTGTCAGCTCGGGGTATTTTTGTGTCTATTCA  250

seq1  TCCCCCCTCACACAGTCCCTCCCAGGGCCCGCAGGCATCTGGGCCTCCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCTCACACAGTCCCTCCCAGGGCCCGCAGGCATCTGGGCCTCCAG  300

seq1  GCCAGAAGACCAAGCCCCAGGCTTAGCACGGCCAGCACAGCCACAGCTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGACCAAGCCCCAGGCTTAGCACGGCCAGCACAGCCACAGCTCC  350

seq1  GGCCAGCAGGGGCACCGTGGCTGCAGGAAGAACATGGGGGTTGTGAATCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCAGGGGCACCGTGGCTGCAGGAAGAACATGGGGGTTGTGAATCC  400

seq1  CAGGCCTTGGGAACTCCCCACTCCCACCCCAGCGTAGAGGGCTGTCACCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTGGGAACTCCCCACTCCCACCCCAGCGTAGAGGGCTGTCACCT  450

seq1  GGGGGGCTGGCAGGCTCATAAGAACCATGGCAGGGGGCCCCATGGGCTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGCTGGCAGGCTCATAAGAACCATGGCAGGGGGCCCCATGGGCTGG  500

seq1  AGGCCGGGCTGGAGCAGTCAGCTGCTGGAAGCGCCCAAGTGGACAGGGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGGGCTGGAGCAGTCAGCTGCTGGAAGCGCCCAAGTGGACAGGGAG  550

seq1  CTGGGCACCCAGGGACCCTGAGTGGCAGGGGTGGGCGGGAGGTGTCATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCACCCAGGGACCCTGAGTGGCAGGGGTGGGCGGGAGGTGTCATTG  600

seq1  CGGTAGATGAGAGAGACAGTGACATTCCTGGAGGTGGAAAGGACAGTAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGATGAGAGAGACAGTGACATTCCTGGAGGTGGAAAGGACAGTAGC  650

seq1  ATCACTAGTTCCCCATCCGAAGAAGAGCCCATCCACCCAATGCCAAGCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGTTCCCCATCCGAAGAAGAGCCCATCCACCCAATGCCAAGCCA  700

seq1  TCACCCATCCTCACTCTCCATCTTCCTCCTCGGGTTCCCTGGAGCTCCCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCATCCTCACTCTCCATCTTCCTCCTCGGGTTCCCTGGAGCTCCCC  750

seq1  CGGAATTC  755
      ||||||||
seq2  CGGAATTC  758

seq1: chr7_51370118_51370928
seq2: B6Ng01-284O01.g_67_882

seq1  GAATTCCCAACCCTGGCAGGTGGCTGTGTACTACTTAGATGAGTACCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACCCTGGCAGGTGGCTGTGTACTACTTAGATGAGTACCTAT  50

seq1  GCGGGGGAGTCCTGTTGGACCGCAACTGGGTTCTCACAGCTGCCCACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGAGTCCTGTTGGACCGCAACTGGGTTCTCACAGCTGCCCACTGC  100

seq1  TATGAAGAGTAAGTAAAGGTGGAGACAGGAAAGCAAGATGGCAGCCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAGTAAGTAAAGGTGGAGACAGGAAAGCAAGATGGCAGCCAGAG  150

seq1  ATCATGACTCCAGGACAGGCTGGGGTACTGAAGGGCAGGGGAGTGGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGACTCCAGGACAGGCTGGGGTACTGAAGGGCAGGGGAGTGGGACT  200

seq1  GGCTGAAACTATCCATGACCTCCTGGGTCTCTCTTTACTCCATCCTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAACTATCCATGACCTCCTGGGTCTCTCTTTACTCCATCCTCCAG  250

seq1  GTTTGTGTTCAGAGTCCTGTTTCTTTTTTTTTTTCTCTCTTATTATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTTCAGAGTCCTGTTTCTTTTTTTTTTTCTCTCTTATTATCTGT  300

seq1  CTCTCTCCTGTCTGTATTCACATATGAGTGTCTCCGTGGCCATCTGTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCTGTCTGTATTCACATATGAGTGTCTCCGTGGCCATCTGTCAC  350

seq1  TGTGTATCTCTGCCTTGGGACACTGGGCACAAACTTTCTGGTTCTGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCTCTGCCTTGGGACACTGGGCACAAACTTTCTGGTTCTGGGTC  400

seq1  TCATGTGTCCTCTTATATCACTACTGACCATAGTGGGGACCAGGCCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTCCTCTTATATCACTACTGACCATAGTGGGGACCAGGCCTAAA  450

seq1  GGGCCCCTGAGGATAGAGAGTGCTGTCCCTGAGGGTAGGCTGTGAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCCTGAGGATAGAGAGTGCTGTCCCTGAGGGTAGGCTGTGAGAGAA  500

seq1  GTCCTCACTCTCCTCAGAGCAGCTCTGCCTTTAGGACCTTCTGTCCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACTCTCCTCAGAGCAGCTCTGCCTTTAGGACCTTCTGTCCACTC  550

seq1  TGAGGACACACAGAGAAGAGCTGGTCAGGACTGGAGCTGGGTGAGGTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACACACAGAGAAGAGCTGGTCAGGACTGGAGCTGGGTGAGGTAAC  600

seq1  TGAGTACAGAGAGAGCTGGATGCTGGGGAGGGAGGGGAGGGCTCAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAGTACAGAGAGAGCTGGATGCTGGGGAGGGAGGGGAGGGTTCAGACCT  650

seq1  TGGGCTGCAGGCCAGGCCTTACCTGCTGGGGAAGTTCAGCCCTGTCCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGCAGGCCAGGCCTTACCTGCTGGGGAAGTTCAGCCCTGTCCTAG  700

seq1  CTGCACCTGAGCAGA-TTTTAGG-CCTACCCTTTCTA-CCCTTGTCTTCT  747
      ||||||||||||||| ||||||| ||||||||||||| ||||||||||||
seq2  CTGCACCTGAGCAGATTTTTAGGCCCTACCCTTTCTACCCCTTGTCTTCT  750

seq1  GTTCCTGTATTTGCTCTCTCTG-CCTCTCTAAATCTATATGTATGTATGA  796
      |||||||||||||||||||||| ||||||||||||||| || ||||||||
seq2  GTTCCTGTATTTGCTCTCTCTGCCCTCTCTAAATCTATTTGGATGTATGA  800

seq1  -ATGCATGTATGTATG  811
       |||||||||||||||
seq2  TATGCATGTATGTATG  816