BAC Information

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BAC

Clone NameB6Ng01-286A19
Chromosome7 (Build37)
Map Location 126,886,501 - 126,986,997
singlet/doubletdoublet
Overlap geneAcsm3, Exod1, 2610020H08Rik
Upstream gene9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233
Downstream geneDcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286A19.bB6Ng01-286A19.g
ACCGA084344GA084345
length1,1881,155
definitionB6Ng01-286A19.b B6Ng01-286A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,886,501 - 126,887,684)(126,985,836 - 126,986,997)
sequence
gaattccttctcgttctggaactcgttctggaagaatcctgtcaacaaag
ggtctcggtgagtcaaactgtctcacacatgaaggatgaagactgtgaaa
tgggatgcggaatccttgggaagagtgaagcagcaagatccacggaaggt
cccagaacagcaataatgtcttcccatcacagccatattctgctatcata
gcattcacagtagccatagccacacccaacaaagtaccttcccatccaga
gtgagcaaccccacatgcctttttcacaggatctgaaaaaactataggaa
tacagtccacaccaagagctgtgattgtgactcctctgatctgattattc
catcataagatccgggctccttcttccccataacccatacttcattggca
tgatcagtctttattcggtaaaatttctctgcattaaatcctgcagcatt
tgccgacctacgaacattttcttgaacgaccactttgggatctctccatt
tggaactactgaaaagattgagtgatcggagagtggctatgtaagatatg
ccacctctccgtgtagtaactccatgtaggaagatgtctgggatcagagg
agatgtgacaatagttaggtcccctttcagcgctggcaggctcacatttc
tatttcactctggatgtcttctagttcatgagttgtggtcacggttattc
cagtggatggtttcaaaaggctatcctcccaagctacctgcaaatcttca
aactcaaattcatacaccttcatgaagagttagtcaacataagccttcat
taacagtttcctgtgctcagggacaatcactttaatgcagctcagatttt
cttcattaatttttttgtttaattgtatacaaagaggcagtcagctgggg
ttactaacagtctcgatttcccacaagacgtgaaaagccatttccttgtt
tccaattcacagaggccatattcccccatccttttccttggtggcattac
tgcaacattattatacaaagggacttggcctggagcatggtgggcagtga
atatttatccagtgtcttcagtacgtcctcacgaacagtttttctgaaag
ttcaatcaagactgctttctgccattcttcaagcaaggcgccacttttcc
catggctccttatggcatatcaacgtttagcatactaa
gaattctataaaactaaagatattcagtcttgactgaaggcatttgttac
actgtctcatgcctgggcatctccagaatgtccctacttacagggggctg
taaaccttgcctagatgaagggggctgatttcagctttgtccaccttacc
ctgatacaggaaccttctaatagactgccattcatggtctctagagccag
ctgagcagcttccaggacttcatattgtatagagaagtaaggctgcacaa
agaacaaggtttttaccattgttactttccaaatcaaactgctaaagaaa
ggggctgagaacgggaccttgaccatagtggctgccatagtgatgggcca
gacagctgctggattctagattgtcagtcagctttaaataaaatcgccta
agttcacgaattggttttaagacagtaactttcattttccttttaaaatc
aaagcccactgttatggtagtacaaggaaaactagcaaattcatcattgt
ctaacttgctcttcatatttattacaaagcactaaggtcattcatgtatg
gcacaggcagggagagattcccagatgtttgattaacttaatttttagac
tgcattccagtccacttgagaagctgttcttccactgcctgggctacatc
ttcaaattatctgcgctacgactcaaagtagctaaatccctgtaatcatc
cgagctacatgtcatcatggaaaaaagttattctacggaagttttatgaa
aaaattgttttgaacaaaattttgaaaatgacaccaatggtaataaaaaa
gaaaaaagacactagatttcatcaaagttaaaagcttttacatatcaggg
actaccgaactgttaaaaggcagaccacaaaataggaaaaaatatctaca
aaccacatatctaataagagattgatactaaaaaattgtagggatgcttg
ggatgatgaagttttacagaggacagccctgaggttgtataatattagtg
gacttatgcaactggagggtagaaatgggaaatcatctgatggtgtatta
gaacaaaacacacaacaaaaggctagcagggtaaaaattaggtaggtaca
gtctgccacaaggttctcaattctaagtctattctcgagaataatactgt
atttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126886501_126887684
seq2: B6Ng01-286A19.b_46_1233

seq1  GAATTCCTTCTCGTTCTGGAACTCGTTCTGGAAGAATCCTGTCAACAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCGTTCTGGAACTCGTTCTGGAAGAATCCTGTCAACAAAG  50

seq1  GGTCTCGGTGAGTCAAACTGTCTCACACATGAAGGATGAAGACTGTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCGGTGAGTCAAACTGTCTCACACATGAAGGATGAAGACTGTGAAA  100

seq1  TGGGATGCGGAATCCTTGGGAAGAGTGAAGCAGCAAGATCCACGGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGCGGAATCCTTGGGAAGAGTGAAGCAGCAAGATCCACGGAAGGT  150

seq1  CCCAGAACAGCAATAATGTCTTCCCATCACAGCCATATTCTGCTATCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACAGCAATAATGTCTTCCCATCACAGCCATATTCTGCTATCATA  200

seq1  GCATTCACAGTAGCCATAGCCACACCCAACAAAGTACCTTCCCATCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCACAGTAGCCATAGCCACACCCAACAAAGTACCTTCCCATCCAGA  250

seq1  GTGAGCAACCCCACATGCCTTTTTCACAGGATCTGAAAAAACTATAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAACCCCACATGCCTTTTTCACAGGATCTGAAAAAACTATAGGAA  300

seq1  TACAGTCCACACCAAGAGCTGTGATTGTGACTCCTCTGATCTGATTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCCACACCAAGAGCTGTGATTGTGACTCCTCTGATCTGATTATTC  350

seq1  CATCATAAGATCCGGGCTCCTTCTTCCCCATAACCCATACTTCATTGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAGATCCGGGCTCCTTCTTCCCCATAACCCATACTTCATTGGCA  400

seq1  TGATCAGTCTTTATTCGGTAAAATTTCTCTGCATTAAATCCTGCAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGTCTTTATTCGGTAAAATTTCTCTGCATTAAATCCTGCAGCATT  450

seq1  TGCCGACCTACGAACATTTTCTTGAACGACCACTTTGGGATCTCTCCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGACCTACGAACATTTTCTTGAACGACCACTTTGGGATCTCTCCATT  500

seq1  TGGAACTACTGAAAAGATTGAGTGATCGGAGAGTGGCTATGTAAGATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTACTGAAAAGATTGAGTGATCGGAGAGTGGCTATGTAAGATATG  550

seq1  CCACCTCTCCGTGTAGTAACTCCATGTAGGAAGATGTCTGGGATCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCTCCGTGTAGTAACTCCATGTAGGAAGATGTCTGGGATCAGAGG  600

seq1  AGATGTGACAATAGTTAGGTCCCCTTTCAGCGCTGGCAGGCTCACATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGACAATAGTTAGGTCCCCTTTCAGCGCTGGCAGGCTCACATTTC  650

seq1  TATTTCACTCTGGATGTCTTCTAGTTCATGAGTTGTGGTCACGGTTATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACTCTGGATGTCTTCTAGTTCATGAGTTGTGGTCACGGTTATTC  700

seq1  CAGTGGATGGTTTCAAAAGGCTATCCTCCCAAGCTACCTGCAAATCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATGGTTTCAAAAGGCTATCCTCCCAAGCTACCTGCAAATCTTCA  750

seq1  AACTCAAATTCATACACCTTCATGAAGAGTTAGTCAACATAAGCCTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAATTCATACACCTTCATGAAGAGTTAGTCAACATAAGCCTTCAT  800

seq1  TAACAGTTTCCTGTGCTCAGGGACAATCACTTTAATGCAGCTCAGATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTTCCTGTGCTCAGGGACAATCACTTTAATGCAGCTCAGATTTT  850

seq1  CTTCATTAATTTTTTTGTTTAATTGTATACAAAGAGGCAGTCAGGCTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTCATTAATTTTTTTGTTTAATTGTATACAAAGAGGCAGTCA-GCTGGG  899

seq1  GTTACTAACAGTCTCGATTTTCCCACAAGACGTGAAAAGCCATTTCC-TG  949
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  GTTACTAACAGTCTCGA-TTTCCCACAAGACGTGAAAAGCCATTTCCTTG  948

seq1  TTTCCAATTCACAGAGGCCATATTCCCCCATCCTTTTCCTTGGTGGCATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATTCACAGAGGCCATATTCCCCCATCCTTTTCCTTGGTGGCATT  998

seq1  ACTGCAACA-TATTATACAAAGGAACTTGGCCTTGGGAGCATGGT-GGCA  1047
      ||||||||| ||||||||||||| |||||||||  |||||||||| ||||
seq2  ACTGCAACATTATTATACAAAGGGACTTGGCCT--GGAGCATGGTGGGCA  1046

seq1  GTGAATA-TTATCCAGTGTCTTCAGTAACGT-CTCACG-ACAGTTTTTCT  1094
      ||||||| |||||||||||||||||| |||| |||||| |||||||||||
seq2  GTGAATATTTATCCAGTGTCTTCAGT-ACGTCCTCACGAACAGTTTTTCT  1095

seq1  GAGAGTTCAATCAAGACTGC-TTCTGCCATTCTTCAAGCAA-GCG-CACT  1141
      || ||||||||||||||||| |||||||||||||||||||| ||| ||||
seq2  GAAAGTTCAATCAAGACTGCTTTCTGCCATTCTTCAAGCAAGGCGCCACT  1145

seq1  TTTTCCCCCAT-GCT-CTTATGCCATATCAGC-TTTAGCATACTAA  1184
      |||   ||||| ||| |||||| ||||||| | |||||||||||||
seq2  TTT---CCCATGGCTCCTTATGGCATATCAACGTTTAGCATACTAA  1188

seq1: chr7_126985836_126986997
seq2: B6Ng01-286A19.g_66_1220 (reverse)

seq1  AAAATACAGATATTATCTCT-GAGAATAGACTTAGAATTGAGAACTTTGT  49
      ||||||||| |||||| ||| |||||||||||||||||||||||| ||||
seq2  AAAATACAG-TATTAT-TCTCGAGAATAGACTTAGAATTGAGAACCTTGT  48

seq1  GGCAAGACTGTAACTACTTA--TTTTTCCCTGCTAGCTTTTTGTTGTTGT  97
      ||| |||||||| |||| ||  |||| |||||||||| |||||||||   
seq2  GGC-AGACTGTACCTACCTAATTTTTACCCTGCTAGCCTTTTGTTGT--G  95

seq1  TGTTTTTGTCTAATACA-CATCAGATGGAATTTCCATTTCTAACCCTTCA  146
      ||||||  ||||||||| |||||||| || || |||||||| ||||| ||
seq2  TGTTTTGTTCTAATACACCATCAGAT-GATTTCCCATTTCT-ACCCTCCA  143

seq1  AGTTTGCATAAGTCCACTAATATTATACAACCTTCAGGGCTGTCCTTCTG  196
         ||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  --GTTGCATAAGTCCACTAATATTATACAACC-TCAGGGCTGTCC-TCTG  189

seq1  TAAAACTTCATCATTCCAAGCATCCCTACAATTTTTTTAGTATCAATCTC  246
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  TAAAACTTCATCATCCCAAGCATCCCTACAA-TTTTTTAGTATCAATCTC  238

seq1  TTATTAGATATGTGGTTTGTAGATATTTTTTCCTATTTTGTGGTCTGCCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGATATGTGGTTTGTAGATATTTTTTCCTATTTTGTGGTCTGCCT  288

seq1  TTTAACAGTTCGGTAGT-CCTGATATGTAAAAGCTTTTAACTTTGATGAA  345
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTAACAGTTCGGTAGTCCCTGATATGTAAAAGCTTTTAACTTTGATGAA  338

seq1  ATCTAGTGTCTTTTTTCTTTTTTATTACCATTGGTGTCATTTTCAAAATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTGTCTTTTTTCTTTTTTATTACCATTGGTGTCATTTTCAAAATT  388

seq1  TTGTTCAAAACAATTTTTTCATAAAACTTCCGTAGAATAACTTTTTTCCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAAAACAATTTTTTCATAAAACTTCCGTAGAATAACTTTTTTCCA  438

seq1  TGATGACATGTAGCTCGGATGATTACAGGGATTTAGCTACTTTGAGTCGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACATGTAGCTCGGATGATTACAGGGATTTAGCTACTTTGAGTCGT  488

seq1  AGCGCAGATAATTTGAAGATGTAGCCCAGGCAGTGGAAGAACAGCTTCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAGATAATTTGAAGATGTAGCCCAGGCAGTGGAAGAACAGCTTCTC  538

seq1  AAGTGGACTGGAATGCAGTCTAAAAATTAAGTTAATCAAACATCTGGGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGACTGGAATGCAGTCTAAAAATTAAGTTAATCAAACATCTGGGAA  588

seq1  TCTCTCCCTGCCTGTGCCATACATGAATGACCTTAGTGCTTTGTAATAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCTGCCTGTGCCATACATGAATGACCTTAGTGCTTTGTAATAAA  638

seq1  TATGAAGAGCAAGTTAGACAATGATGAATTTGCTAGTTTTCCTTGTACTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAGCAAGTTAGACAATGATGAATTTGCTAGTTTTCCTTGTACTA  688

seq1  CCATAACAGTGGGCTTTGATTTTAAAAGGAAAATGAAAGTTACTGTCTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACAGTGGGCTTTGATTTTAAAAGGAAAATGAAAGTTACTGTCTTA  738

seq1  AAACCAATTCGTGAACTTAGGCGATTTTATTTAAAGCTGACTGACAATCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATTCGTGAACTTAGGCGATTTTATTTAAAGCTGACTGACAATCT  788

seq1  AGAATCCAGCAGCTGTCTGGCCCATCACTATGGCAGCCACTATGGTCAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCAGCAGCTGTCTGGCCCATCACTATGGCAGCCACTATGGTCAAG  838

seq1  GTCCCGTTCTCAGCCCCTTTCTTTAGCAGTTTGATTTGGAAAGTAACAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCGTTCTCAGCCCCTTTCTTTAGCAGTTTGATTTGGAAAGTAACAAT  888

seq1  GGTAAAAACCTTGTTCTTTGTGCAGCCTTACTTCTCTATACAATATGAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAACCTTGTTCTTTGTGCAGCCTTACTTCTCTATACAATATGAAG  938

seq1  TCCTGGAAGCTGCTCAGCTGGCTCTAGAGACCATGAATGGCAGTCTATTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAAGCTGCTCAGCTGGCTCTAGAGACCATGAATGGCAGTCTATTA  988

seq1  GAAGGTTCCTGTATCAGGGTAAGGTGGACAAAGCTGAAATCAGCCCCCTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTCCTGTATCAGGGTAAGGTGGACAAAGCTGAAATCAGCCCCCTT  1038

seq1  CATCTAGGCAAGGTTTACAGCCCCCTGTAAGTAGGGACATTCTGGAGATG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGGCAAGGTTTACAGCCCCCTGTAAGTAGGGACATTCTGGAGATG  1088

seq1  CCCAGGCATGAGACAGTGTAACAAATGCCTTCAGTCAAGACTGAATATCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCATGAGACAGTGTAACAAATGCCTTCAGTCAAGACTGAATATCT  1138

seq1  TTAGTTTTATAGAATTC  1162
      |||||||||||||||||
seq2  TTAGTTTTATAGAATTC  1155