BAC Information

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BAC

Clone NameB6Ng01-286B03
Chromosome7 (Build37)
Map Location 88,128,746 - 88,312,243
singlet/doubletdoublet
Overlap geneZfp592, Alpk3, Slc28a1, EG623286
Upstream geneZfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a
Downstream geneLOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286B03.bB6Ng01-286B03.g
ACCGA084360GA084361
length1,1421,073
definitionB6Ng01-286B03.b B6Ng01-286B03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,311,103 - 88,312,243)(88,128,746 - 88,129,812)
sequence
gaattcagcaaccactggtggctcacagccatctataatgggctctgatg
ccctctactggaatgtaggtgtacatgcagatagagccctcatacataaa
gtaaacaagtctaaacaaaaaagatacaaacctctccttattaggagctt
aaaaacaaaacaaacagccggggcatagtggcgcaagcctttaatcccag
cactcaggaggcagagacaggaggatttctgagtttgaagccagcctggt
ctacaaagtgagttctaggacagccaggactatacagagaaaccctgtct
cgaaaaacaaaaacaaacaaacaaaaatggaacactttgaagtaattgct
tgctactcatgcctcacaccatagattaagtaaattttagaccactgaag
aaaagacgtattttaaacataaaaccataggctaccataggataatgact
atagcttcaaggtagttgtgtcctactcatttgggggttgactaaatacg
ctaaggctcacaaagtccagtggcagaagctcacatagacaaggcagctg
tgccagaggtggcggcatccagtcctgtccagctcagctcaaggtcttac
cagttcatctcgttgtttctggaatttttgtttgtttgtttttgtttctg
gaatttgatacttacacaaccactttataagattagaaagaagggaatgg
aaaagggaaatctttcagagagaaaggtttggtataaaaattattgttta
aaaaaattaaattctttcaaacaaaattaagaggagggaataataggggg
aaattacagaaagccataacagaaataatctaggcctggtggcctggcct
tgaactcctagttagatggaggttagaggactatgaactgaaggcttgcc
tgggtaacttaatgagacttgtctcaaagcaaaactggaaacattctaag
gtagaaaatttttctggaattcttttctttaaacacattttctttaatgt
gctttgatgttatgcctgcatgttgcatacatatgaggatattcagagcc
tctcggaactggagttataagagtctgaagctgtcatgtgggtgctgaat
gaacccttaggtcctctagaagagcaacctagtgcctttaaa
gaattccaggacagccagggctacacagagaaaccctgtctcgaaaaacc
aaaacaacaacaacaacaacaaaaaattaagacaatgaaaagcaaacaaa
aaaacatacaaaacaaagtagggatgatactcagtagcttggtggcacag
tacttgagtgattaaaaaaggtccacccctatccccagtacagaaaaggg
ggaaggaaagagaggcataaatagaaacttaatgaaagggggaaaatcga
tatagctaattgttatgtattataactcagtataattacagtgtaattac
tgaggtggcagcaggaatatcttggtgggcactgccaaggtgtcctccag
aggaatcccgccataagacaggcctagtataaagaagaattattttgagg
gggagaaaggggagtggcgacctggaaagggctagaggcaaagaaggggg
agggaacagaaagagaggaagagaggccccctggcaccatgtaggaagag
agagagtgacagagacacagagagagagagagacagacagacagacagag
acagagagagtgagaaagtgagtgagagagacagagacagagacagagct
ggggtagcgagcagtccctctttatatgcccggcttgtacctggtgggca
gctacataactgttgctaggtagctgttggccagagactagtgggattgt
ctgtaaaccaacactaataagtatacaaaaaatatattcaacatcaactt
tttttaggggcctccttgtataacactagctagtatggcactcactatgt
ggaccaggttgtccttgaacttagtgatcctcctgcctctgccttctgaa
tgctatttataggagtgtactaccacacctagcttgtaattctgtttgtt
tgtttgtttttccatatagggtcttgtttgtaaggcaataatgtttttgt
gcactgtgtaaaggttaccatgttattcaaatgctgattttttctgccct
caatatcttgcttcaatccaacacacagcacttgttagtgcttataggaa
gaatctcctgtctcaagtttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88311103_88312243
seq2: B6Ng01-286B03.b_49_1190 (reverse)

seq1  TTTAAA-GCACTA-GTTGCTCTTCTAGAGAACCTA--GGTTCAATTTCCA  46
      |||||| |||||| ||||||||||||||| |||||  ||||||   | ||
seq2  TTTAAAGGCACTAGGTTGCTCTTCTAGAGGACCTAAGGGTTCA---TTCA  47

seq1  GCACCCACATGACAGC-TCAGAACTC-TATAACTCCAGTTCCGAGA-GCT  93
      |||||||||||||||| |||| |||| ||||||||||||||||||| |||
seq2  GCACCCACATGACAGCTTCAG-ACTCTTATAACTCCAGTTCCGAGAGGCT  96

seq1  CTG-ATATCCTCATATGTATGC-ACATGCAGGCATAACATCAAAGCACAT  141
      ||| |||||||||||||||||| |||||||||||||||||||||||||| 
seq2  CTGAATATCCTCATATGTATGCAACATGCAGGCATAACATCAAAGCACA-  145

seq1  TTAAAGAAAATGTGTTTAAAGAAAAGAATTCCAGAAAAATTTTCTTACCT  191
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  TTAAAGAAAATGTGTTTAAAGAAAAGAATTCCAGAAAAATTTTC-TACC-  193

seq1  TTAGAATGTTTCCAGTTTTGCTTTGAGACAAAGTCTCATTAAGTTACCCA  241
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTAGAATGTTTCCAGTTTTGCTTTGAGAC-AAGTCTCATTAAGTTACCCA  242

seq1  GGCAAGCCTTCAGTTCATAGTCCTCTAACCTCCATCTAACTAGGAGTTCA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCCTTCAGTTCATAGTCCTCTAACCTCCATCTAACTAGGAGTTCA  292

seq1  AGGCCAGGCCACCAGGCCTAGATTATTTCTGTTATGGCTTTCTGTAATTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGCCACCAGGCCTAGATTATTTCTGTTATGGCTTTCTGTAATTT  342

seq1  CCCCCTATTATTCCCTCCTCTTAATTTTGTTTGAAAGAATTTAATTTTTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTATTATTCCCTCCTCTTAATTTTGTTTGAAAGAATTTAATTTTTT  392

seq1  TAAACAATAATTTTTATACCAAACCTTTCTCTCTGAAAGATTTCCCTTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATAATTTTTATACCAAACCTTTCTCTCTGAAAGATTTCCCTTTT  442

seq1  CCATTCCCTTCTTTCTAATCTTATAAAGTGGTTGTGTAAGTATCAAATTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCCTTCTTTCTAATCTTATAAAGTGGTTGTGTAAGTATCAAATTC  492

seq1  CAGAAACAAAAACAAACAAACAAAAATTCCAGAAACAACGAGATGAACTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAAAAACAAACAAACAAAAATTCCAGAAACAACGAGATGAACTG  542

seq1  GTAAGACCTTGAGCTGAGCTGGACAGGACTGGATGCCGCCACCTCTGGCA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACCTTGAGCTGAGCTGGACAGGACTGGATGCCGCCACCTCTGGCA  592

seq1  CAGCTGCCTTGTCTATGTGAGCTTCTGCCACTGGACTTTGTGAGCCTTAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCTTGTCTATGTGAGCTTCTGCCACTGGACTTTGTGAGCCTTAG  642

seq1  CGTATTTAGTCAACCCCCAAATGAGTAGGACACAACTACCTTGAAGCTAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTTAGTCAACCCCCAAATGAGTAGGACACAACTACCTTGAAGCTAT  692

seq1  AGTCATTATCCTATGGTAGCCTATGGTTTTATGTTTAAAATACGTCTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTATCCTATGGTAGCCTATGGTTTTATGTTTAAAATACGTCTTTT  742

seq1  CTTCAGTGGTCTAAAATTTACTTAATCTATGGTGTGAGGCATGAGTAGCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGGTCTAAAATTTACTTAATCTATGGTGTGAGGCATGAGTAGCA  792

seq1  AGCAATTACTTCAAAGTGTTCCATTTTTGTTTGTTTGTTTTTGTTTTTCG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTACTTCAAAGTGTTCCATTTTTGTTTGTTTGTTTTTGTTTTTCG  842

seq1  AGACAGGGTTTCTCTGTATAGTCCTGGCTGTCCTAGAACTCACTTTGTAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTCTGTATAGTCCTGGCTGTCCTAGAACTCACTTTGTAG  892

seq1  ACCAGGCTGGCTTCAAACTCAGAAATCCTCCTGTCTCTGCCTCCTGAGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTGGCTTCAAACTCAGAAATCCTCCTGTCTCTGCCTCCTGAGTG  942

seq1  CTGGGATTAAAGGCTTGCGCCACTATGCCCCGGCTGTTTGTTTTGTTTTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCTTGCGCCACTATGCCCCGGCTGTTTGTTTTGTTTTT  992

seq1  AAGCTCCTAATAAGGAGAGGTTTGTATCTTTTTTGTTTAGACTTGTTTAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTAATAAGGAGAGGTTTGTATCTTTTTTGTTTAGACTTGTTTAC  1042

seq1  TTTATGTATGAGGGCTCTATCTGCATGTACACCTACATTCCAGTAGAGGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATGAGGGCTCTATCTGCATGTACACCTACATTCCAGTAGAGGG  1092

seq1  CATCAGAGCCCATTATAGATGGCTGTGAGCCACCAGTGGTTGCTGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGCCCATTATAGATGGCTGTGAGCCACCAGTGGTTGCTGAATTC  1142

seq1: chr7_88128746_88129812
seq2: B6Ng01-286B03.g_67_1139

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC  50

seq1  AAAACAACAACAACAACAACAAAAAATTAAGACAATGAAAAGCAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAACAACAACAACAAAAAATTAAGACAATGAAAAGCAAACAAA  100

seq1  AAAACATACAAAACAAAGTAGGGATGATACTCAGTAGCTTGGTGGCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATACAAAACAAAGTAGGGATGATACTCAGTAGCTTGGTGGCACAG  150

seq1  TACTTGAGTGATTAAAAAAGGTCCACCCCTATCCCCAGTACAGAAAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAGTGATTAAAAAAGGTCCACCCCTATCCCCAGTACAGAAAAGGG  200

seq1  GGAAGGAAAGAGAGGCATAAATAGAAACTTAATGAAAGGGGGAAAATCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAAGAGAGGCATAAATAGAAACTTAATGAAAGGGGGAAAATCGA  250

seq1  TATAGCTAATTGTTATGTATTATAACTCAGTATAATTACAGTGTAATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTAATTGTTATGTATTATAACTCAGTATAATTACAGTGTAATTAC  300

seq1  TGAGGTGGCAGCAGGAATATCTTGGTGGGCACTGCCAAGGTGTCCTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGCAGCAGGAATATCTTGGTGGGCACTGCCAAGGTGTCCTCCAG  350

seq1  AGGAATCCCGCCATAAGACAGGCCTAGTATAAAGAAGAATTATTTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCCCGCCATAAGACAGGCCTAGTATAAAGAAGAATTATTTTGAGG  400

seq1  GGGAGAAAGGGGAGTGGCGACCTGGAAAGGGCTAGAGGCAAAGAAGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAGGGGAGTGGCGACCTGGAAAGGGCTAGAGGCAAAGAAGGGGG  450

seq1  AGGGAACAGAAAGAGAGGAAGAGAGGCCCCCTGGCACCATGTAGGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACAGAAAGAGAGGAAGAGAGGCCCCCTGGCACCATGTAGGAAGAG  500

seq1  AGAGAGTGACAGAGACACAGAGAGAGAGAGAGACAGACAGACAGACAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGACAGAGACACAGAGAGAGAGAGAGACAGACAGACAGACAGAG  550

seq1  ACAGAGAGAGTGAGAAAGTGAGTGAGAGAGACAGAGACAGAGACAGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGTGAGAAAGTGAGTGAGAGAGACAGAGACAGAGACAGAGCT  600

seq1  GGGGTAGCGAGCAGTCCCTCTTTATATGCCCGGCTTGTACCTGGTGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAGCGAGCAGTCCCTCTTTATATGCCCGGCTTGTACCTGGTGGGCA  650

seq1  GCTACATAACTGTTGCTAGGTAGCTGTTGGCCAGAGACTAGTGGGATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATAACTGTTGCTAGGTAGCTGTTGGCCAGAGACTAGTGGGATTGT  700

seq1  CTGTAAACCAACACTAATAAGTATACAAAAAATATATTCAACATCAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACCAACACTAATAAGTATACAAAAAATATATTCAACATCAACTT  750

seq1  TTTTTAGGGGCCTCCTTGTATAACACTAGCTAGTATGGCACTCACTATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGGGCCTCCTTGTATAACACTAGCTAGTATGGCACTCACTATGT  800

seq1  GGACCAGGTTGTCCTTGAACTTAGTGATCCTCCTGCCTCTGCCTTCTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGGTTGTCCTTGAACTTAGTGATCCTCCTGCCTCTGCCTTCTGAA  850

seq1  TGCTA-TTATAGGAGTGTACTACCACACCTAGCTTGTAATTCTGTTTGTT  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTATAGGAGTGTACTACCACACCTAGCTTGTAATTCTGTTTGTT  900

seq1  TGTTTGTTTTTTCCATATAGGGTCTTGTTTGT-AGGC-ATAATGTTTTTG  947
      |||||| ||||||||||||||||||||||||| |||| ||||||||||||
seq2  TGTTTG-TTTTTCCATATAGGGTCTTGTTTGTAAGGCAATAATGTTTTTG  949

seq1  TGCACTGTGTAAAGGTTACCCATGTTATTCAAATGCTGA-TTTTTCTGCC  996
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  TGCACTGTGTAAAGGTTA-CCATGTTATTCAAATGCTGATTTTTTCTGCC  998

seq1  CTC-ATATCTTGCTTCAATCC-ACACACAGCACT--GTAGTGCTTATAGG  1042
      ||| ||||||||||||||||| ||||||||||||   |||||||||||||
seq2  CTCAATATCTTGCTTCAATCCAACACACAGCACTTGTTAGTGCTTATAGG  1048

seq1  AAGAATCTCCTGTCTCAAGTTTGTG  1067
      |||||||||||||||||||||||||
seq2  AAGAATCTCCTGTCTCAAGTTTGTG  1073