BAC Information

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BAC

Clone NameB6Ng01-286C24
Chromosome7 (Build37)
Map Location 146,781,843 - 146,782,905
singlet/doubletsinglet
Overlap genenone
Upstream geneMapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2
Downstream geneE030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286C24.bB6Ng01-286C24.g
ACCGA084448GA084449
length1,1981,058
definitionB6Ng01-286C24.b B6Ng01-286C24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactcaggaatatcgaatggctgagaagcgcctaaagaaaca
ttcaacactcttagtcatcagggaaatgcaaatcagaacaactatgagaa
tattgagaatattgattggcacagtggccatgggatggtggcacatagac
tcaggtggtctaaggaaccagagaaagggaatgagaggagaaataaaaat
gagatattctcaaacaatattgagaattccacctcataccaatcagaatg
gtcaagatcaaaaactcaggtgacagcagatgctggtgaggatgtggaga
aagaggaacacctctccattgttggtgggattgcaagctggtacaacccc
tctggaaatcagtctggcggttcctcagaaaattggacatagtatagtac
tatctgaggaccactcctgggcatatacccaaaagatgttccaacatata
acaaggacacatgctccactatgttcatagcagccttatttataatagtc
agaagctagaaacaacccagatgtccctgaacagaggaatagaaacagaa
aatgtggtacaatggagtactactcagctattaaaaacaatgacttcatg
aaattcttaagcaaatgaatgtaactagaaaatatcctgagtgaggtaac
ccaattacaaaagaacacatatggtatgcactcattgataagtcaatatt
aaccccaaaactaagaatacccaaggtacaatttacagaccacatgaagc
tcaagaagaaggaagaccaaagtgtagatgctttggtccttcttagatgg
gtgaacaaaatactcacaggaggagatacagagacaaagtgtgtagcaga
gactgaaggaaagaccatccagagactgcccctcctggggatccatccca
tatacactcaccaaactcagatactattatgaatgtcaggaagtgcatgc
tgacaggagcctgatatagctgtcctcctgagaggctctgccagagcctt
ataaaatacagagtggatgcttgcagccacattgaactgatccacagggt
tccccagtgagagctagagagggactgaggagtgaggggtgcacccatag
aagaacacactgtcaacaacagacccgccgagagcctccaagtctgatca
ccaacctaagagttacaccatggagggaactctcatgggtttccacac
gaattccagggaccactgagagaacccacaaaattccagcagtcgctgtg
tgttacatgcaatggcccctggggaaccagatctgggcagaagaggctgt
ggtttcctgtgtggcagatggtagctttaggctgggcaggcaacgagaag
aggggggctagggacactgagtgctgccctaagcagggtaacctcctggg
aatgatggtccggagagcttcgtgagaaatgctgagaagtgttgatgcat
tatgtggaccccagctttgatgagtcccctccagaaaccgggtgtggccc
ctgagtgaacagtggcagaacagggactgatcttcaaaggccttgcttca
gagctccttaaaacacctcagggaaaggtttgccttgcaaacttccttgg
gtggagacaaaagacaaggagtgtaagcaagggcaccaggcacaagggag
gtggctgctgagatgggggactgagtcaggaatccaggctgtgcctgtct
ttctgcccggggctccagcccagttgactgtagtctccacaatccctcat
gtgcccctgcccctgccccttctgtaggtggtccaccagacagctccagg
ctaggtgtcaatagagccctgggtactggaatctagtctaatctaggagg
taagggctgcagaatcaacagaggagctttgccagggacctctggcctat
tcccagctttggctgccaccaattggaaaggaaaggatgttttaaatggg
atttttgttttaaagtatcagatgcaatatatttcacctcctgatatgac
gagtctggggaaaacgagaagatggtgggaggaacacacccaccaagcct
tggtgcagctttgctaaggctttctttttatgttccaattataaaaataa
acagttaacaaaaatctttatttaaaattggaaagttcacacttaaagag
aatagactttatctttagaagctagtgaccagctatgttggggctgccgg
gctgatagagaccactttacggagcatcgctgtaggtggtgtctagatgg
ctgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146781843_146782905
seq2: B6Ng01-286C24.g_64_1121

seq1  GAATTCCAGGGACCACTGAGAGAACCCACAAAATTCCAGCAGTCGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGACCACTGAGAGAACCCACAAAATTCCAGCAGTCGCTGTG  50

seq1  TGTTACATGCAATGGCCCCTGGGGAACCAGATCTGGGCAGAAGAGGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATGCAATGGCCCCTGGGGAACCAGATCTGGGCAGAAGAGGCTGT  100

seq1  GGTTTCCTGTGTGGCAGATGGTAGCTTTAGGCTGGGCAGGCAACGAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCTGTGTGGCAGATGGTAGCTTTAGGCTGGGCAGGCAACGAGAAG  150

seq1  AGGGGGGCTAGGGACACTGAGTGCTGCCCTAAGCAGGGTAACCTCCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGCTAGGGACACTGAGTGCTGCCCTAAGCAGGGTAACCTCCTGGG  200

seq1  AATGATGGTCCGGAGAGCTTCGTGAGAAATGCTGAGAAGTGTTGATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGGTCCGGAGAGCTTCGTGAGAAATGCTGAGAAGTGTTGATGCAT  250

seq1  TATGTGGACCCCAGCTTTGATGAGTCCCCTCCAGAAACCGGGTGTGGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGACCCCAGCTTTGATGAGTCCCCTCCAGAAACCGGGTGTGGCCC  300

seq1  CTGAGTGAACAGTGGCAGAACAGGGACTGATCTTCAAAGGCCTTGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGAACAGTGGCAGAACAGGGACTGATCTTCAAAGGCCTTGCTTCA  350

seq1  GAGCTCCTTAAAACACCTCAGGGAAAGGTTTGCCTTGCAAACTTCCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTTAAAACACCTCAGGGAAAGGTTTGCCTTGCAAACTTCCTTGG  400

seq1  GTGGAGACAAAAGACAAGGAGTGTAAGCAAGGGCACCAGGCACAAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACAAAAGACAAGGAGTGTAAGCAAGGGCACCAGGCACAAGGGAG  450

seq1  GTGGCTGCTGAGATGGGGGACTGAGTCAGGAATCCAGGCTGTGCCTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGCTGAGATGGGGGACTGAGTCAGGAATCCAGGCTGTGCCTGTCT  500

seq1  TTCTGCCCGGGGCTCCAGCCCAGTTGACTGTAGTCTCCACAATCCCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCCGGGGCTCCAGCCCAGTTGACTGTAGTCTCCACAATCCCTCAT  550

seq1  GTGCCCCTGCCCCTGCCCCTTCTGTAGGTGGTCCACCAGACAGCTCCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCTGCCCCTGCCCCTTCTGTAGGTGGTCCACCAGACAGCTCCAGG  600

seq1  CTAGGTGTCAATAGAGCCCTGGGTACTGGAATCTAGTCTAATCTAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGTCAATAGAGCCCTGGGTACTGGAATCTAGTCTAATCTAGGAGG  650

seq1  TAAGGGCTGCAGAATCAACAGAGGAGCTTTGCCAGGGACCTCTGGCCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCTGCAGAATCAACAGAGGAGCTTTGCCAGGGACCTCTGGCCTAT  700

seq1  TCCCAGCTTTGGCTGCCACCAATTGG-AAGGAAAGGATGTTTTAAATGGG  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCCCAGCTTTGGCTGCCACCAATTGGAAAGGAAAGGATGTTTTAAATGGG  750

seq1  ATTTTTGTTTTAAAGTATCAGATGCAATATATTTCACCTCCTGATATGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTTTAAAGTATCAGATGCAATATATTTCACCTCCTGATATGAC  800

seq1  GAGTCTGGGGAAAACGAGAAGATGGTGGGAGGAACACACCCACCAAGCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGGGGAAAACGAGAAGATGGTGGGAGGAACACACCCACCAAGCCT  850

seq1  TGGTGCAGCTTTGCTAAGGGCTTC-TTTTATGTTCCAATTTATAAAAATA  898
      |||||||||||||||||||  ||| ||||||||||||| |||||||||||
seq2  TGGTGCAGCTTTGCTAAGGCTTTCTTTTTATGTTCCAA-TTATAAAAATA  899

seq1  AACAGTTAACAAAAATCTTTATTTTAAAAATTGGAAAAGTTCACCACTTA  948
      ||||||||||||||||||||||||  |||||||| |||||||| ||||||
seq2  AACAGTTAACAAAAATCTTTATTT--AAAATTGG-AAAGTTCA-CACTTA  945

seq1  AAGAGAATAGACTTTATCTTTAAGAAGCTAAGTGACCAGCTATGGTGGGG  998
      ||||||||||||||||||||| ||||||| |||||||||||||| |||||
seq2  AAGAGAATAGACTTTATCTTT-AGAAGCT-AGTGACCAGCTATGTTGGGG  993

seq1  CTGGCCGGCCTGATAGAGA-CAC-TTACAGAGCATCGCTGGTAGGTGGTG  1046
      || ||||| |||||||||| ||| |||| |||||||||| ||||||||| 
seq2  CT-GCCGGGCTGATAGAGACCACTTTACGGAGCATCGCT-GTAGGTGGT-  1040

seq1  GGCTAGAT-GCTGTGTGA  1063
      | |||||| |||||||||
seq2  GTCTAGATGGCTGTGTGA  1058