BAC Information

Click to search

BAC

Clone NameB6Ng01-287A15
Chromosome7 (Build37)
Map Location 61,456,935 - 61,458,116
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287A15.bB6Ng01-287A15.g
ACCGA085073GA085074
length1,2051,184
definitionB6Ng01-287A15.b B6Ng01-287A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcgattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accatcggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtctggcatggtgattccgccagaagttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagacaa
atttgcaaattgctccttccaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttccttaatttctttcttcagagattttaagtttttatcatac
agatctttcactttcctagtagagtcacgccaagatattttatattattt
gtgactatgagaaggtgttgtttcctaattcttctcagcctgtttattct
tgtatagagaagccatgactgtttgagtttattttatatcagctactcac
caagctgtttatcagtttagggagtctctgtagaattttaggtcacttat
atactatcaatcatctgccaaagaggtgatattggactccttccatgaac
ctgatccctgtgcgaatgctgctaaactcaaaacatgtgtaaagagtaga
gactg
gaattcaaaaggtataaaactgcgaagttctgtagctatgaggaaattca
tttgttagtgtttgtttctgatggtcttttacaagccagggtggctttaa
atttactatatagcagctagacttgaattccttatcctcctgcccaactt
ccaagtgctgggcttatataaatgtaccaccgtcactaccattactagct
aattcaaaatgtgatctttaaagctgaaagaataaatgatatttgggaat
taaaattatcagaattataggcaaaggagacatggattctagcagggagt
taatgcacagatatatgcagatataggactcacttgaacacagataactt
aggaagagtttgtgatgatgataatattctctgtaaacttttacctcata
ttcttccctctatctccaggggtgttcacctctgtcagaagtccatgata
taagagttccagacttggcatgccagcttgcaagcccaaactccttttgg
atggggcctccttcttctgccctagtggctatgatcatgcagtattacac
ctaccatagatctccctttccttgacactgtctcatttactagagctgtt
attctttcagccaccagcaactctcttgtgtattcttagaaaagaaagaa
caaagaatgaaggaaagaacattatttctagattaaatgaaagtgtcctg
caagtcacagaaaatttctctgcaaataagtcaattaagataaaagagtg
atgcatatttatttaggatttacataattatttgtgtccactaacatgtt
tcataagcaatgtgccatttcacttttttcccctgaactttcttaactat
ttatgaactcatcaaattcagtttttcatgtcacagaaaaaaaaagtagt
ctgtttgattcagcgtgataagtttaattaatttattgttttttacttta
gcttatgtctgttcattgatgagacactagaaacacacattacttgccca
atccttgctcttttgccattctataaaacatttacgcctactggatccac
acaggatcagtacagtgtagaatggactgcataattgaatactcaacatt
ctgggcattctttattgcactctgaccatgaatgacaggtgtccctatca
ttgtaaataactccatttcataccagtgtcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61456935_61458116
seq2: B6Ng01-287A15.g_66_1249 (reverse)

seq1  CTAGG-CACTGGTATGGAATGAGTTTATTTTACACATGATAGGGACACTT  49
      ||||| |||||||||| ||||   ||| |||||| ||||||||||||| |
seq2  CTAGGACACTGGTATGAAATGGAGTTA-TTTACA-ATGATAGGGACACCT  48

seq1  GTCA-TCATGGGTCAGAGTGC-ATATAG-ATG-CCAGAATGTTGAGTATT  95
      |||| |||| ||||||||||| ||| || ||| |||||||||||||||||
seq2  GTCATTCAT-GGTCAGAGTGCAATAAAGAATGCCCAGAATGTTGAGTATT  97

seq1  C-ATTATGCAGTCCCATTCTACACTGTACTGAATCTGTGTGGATCCAGTA  144
      | |||||||||| |||||||||||||||||||  ||||||||||||||||
seq2  CAATTATGCAGT-CCATTCTACACTGTACTGATCCTGTGTGGATCCAGTA  146

seq1  -GCGTAAATG-TTTATAGAATGGCAAAAGAGCAAGGATTGGGCAAGTAAT  192
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGCGTAAATGTTTTATAGAATGGCAAAAGAGCAAGGATTGGGCAAGTAAT  196

seq1  GTGTGTTTCTAGTGTTCTCATCAATTGAACAGACATAAGCTAAAGTAAAA  242
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  GTGTGTTTCTAGTG-TCTCATCAA-TGAACAGACATAAGCTAAAGTAAAA  244

seq1  AACAATAAATTAATTAAACTTATCACGCTGAATCAAACAGACTACTTTTT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAAATTAATTAAACTTATCACGCTGAATCAAACAGACTACTTTTT  294

seq1  TTTTCTGTGACATGAAAAACTGAATTTGATGAGTTCATAAATAGTTAAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGACATGAAAAACTGAATTTGATGAGTTCATAAATAGTTAAGA  344

seq1  AAGTTCAGGGGAAAAAAGTGAAATGGCACATTGCTTATGAAACATGTTAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGGGGAAAAAAGTGAAATGGCACATTGCTTATGAAACATGTTAG  394

seq1  TGGACACAAATAATTATGTAAATCCTAAATAAATATGCATCACTCTTTTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACAAATAATTATGTAAATCCTAAATAAATATGCATCACTCTTTTA  444

seq1  TCTTAATTGACTTATTTGCAGAGAAATTTTCTGTGACTTGCAGGACACTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTGACTTATTTGCAGAGAAATTTTCTGTGACTTGCAGGACACTT  494

seq1  TCATTTAATCTAGAAATAATGTTCTTTCCTTCATTCTTTGTTCTTTCTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAATCTAGAAATAATGTTCTTTCCTTCATTCTTTGTTCTTTCTTT  544

seq1  TCTAAGAATACACAAGAGAGTTGCTGGTGGCTGAAAGAATAACAGCTCTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAATACACAAGAGAGTTGCTGGTGGCTGAAAGAATAACAGCTCTA  594

seq1  GTAAATGAGACAGTGTCAAGGAAAGGGAGATCTATGGTAGGTGTAATACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAGACAGTGTCAAGGAAAGGGAGATCTATGGTAGGTGTAATACT  644

seq1  GCATGATCATAGCCACTAGGGCAGAAGAAGGAGGCCCCATCCAAAAGGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATCATAGCCACTAGGGCAGAAGAAGGAGGCCCCATCCAAAAGGAG  694

seq1  TTTGGGCTTGCAAGCTGGCATGCCAAGTCTGGAACTCTTATATCATGGAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTTGCAAGCTGGCATGCCAAGTCTGGAACTCTTATATCATGGAC  744

seq1  TTCTGACAGAGGTGAACACCCCTGGAGATAGAGGGAAGAATATGAGGTAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACAGAGGTGAACACCCCTGGAGATAGAGGGAAGAATATGAGGTAA  794

seq1  AAGTTTACAGAGAATATTATCATCATCACAAACTCTTCCTAAGTTATCTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTACAGAGAATATTATCATCATCACAAACTCTTCCTAAGTTATCTG  844

seq1  TGTTCAAGTGAGTCCTATATCTGCATATATCTGTGCATTAACTCCCTGCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAGTGAGTCCTATATCTGCATATATCTGTGCATTAACTCCCTGCT  894

seq1  AGAATCCATGTCTCCTTTGCCTATAATTCTGATAATTTTAATTCCCAAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCATGTCTCCTTTGCCTATAATTCTGATAATTTTAATTCCCAAAT  944

seq1  ATCATTTATTCTTTCAGCTTTAAAGATCACATTTTGAATTAGCTAGTAAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTATTCTTTCAGCTTTAAAGATCACATTTTGAATTAGCTAGTAAT  994

seq1  GGTAGTGACGGTGGTACATTTATATAAGCCCAGCACTTGGAAGTTGGGCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGACGGTGGTACATTTATATAAGCCCAGCACTTGGAAGTTGGGCA  1044

seq1  GGAGGATAAGGAATTCAAGTCTAGCTGCTATATAGTAAATTTAAAGCCAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATAAGGAATTCAAGTCTAGCTGCTATATAGTAAATTTAAAGCCAC  1094

seq1  CCTGGCTTGTAAAAGACCATCAGAAACAAACACTAACAAATGAATTTCCT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTGTAAAAGACCATCAGAAACAAACACTAACAAATGAATTTCCT  1144

seq1  CATAGCTACAGAACTTCGCAGTTTTATACCTTTTGAATTC  1182
      ||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTACAGAACTTCGCAGTTTTATACCTTTTGAATTC  1184