BAC Information

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BAC

Clone NameB6Ng01-287O06
Chromosome7 (Build37)
Map Location 109,043,725 - 109,196,233
singlet/doubletdoublet
Overlap gene3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121
Upstream geneArhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1
Downstream geneTrpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287O06.bB6Ng01-287O06.g
ACCGA085695GA085696
length991771
definitionB6Ng01-287O06.b B6Ng01-287O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,195,715 - 109,196,233)(109,043,725 - 109,044,501)
sequence
gaattcacaaaaatgtttttatttccttaggaattcaaagcaagtaatgt
ctgtaagatgacttggattatacatccttataccatggcattggtgtgtg
tgtgtgtgtgtgtgtgtgtgtgttaagctccaggagtctacctgttgtgt
tctgtccgtcctatcatgttcagtccatttatctcatctgtgctagctag
ttttatgccagcttgatacagctagagtcattttgaataaatcaagaaaa
tgcctccaccagattggcctgtgggtaagtaagcctgtgatacattttct
tgattaataattagtcagtgtgggtgctgctacctctttccctcatgatg
gactgactacaagctttaggataatataccattccacttttgttttgatc
atgggttttttttttttttgttttgttttttaagatttattttttattac
aatatgttaagtacactgtagctgtcttcagacagcaccagaagagggca
tcagatctcattacaggtggttatgagccaccatgtgcttgctgggattt
gaactcggtacctctggaagagcagtcagggctcttacctgccgagccat
cttgccagccttgatcatggtgttctatcatggcaataaaaaccctaact
aagacaccaaccttcctttgtgttggggttacagatgcaggctaccatat
ccagatctttcaaacttgcatagcaagtactttactaagcctttcccagc
catatttttaaattcaattttatggaggaatgaagttggacccctgctgc
acagcatacataaaaattaactcaagtgtcaatgatatgggcacagtggt
aggggcacttgctgccaagcctgaggacctgtgtgatggagagaacccaa
cttttcataagtggttctctggacctccatacctcaacggccatgacaat
ttgcactctccaaaaataaataaatgtattatgtgtgtgcg

gaattctcagagaacctggatagtcagaccagcgatagcagggacttgtg
gtattgaataagaataagatagaagagcaattgaggaaaattcccagcat
cactcttgggcctacacatacatacacatgcatacacacacacacacaca
cacacacacacacacacacgatgttcaaacacacatatacataagataaa
attttaaatagataaaaaagaggccagcgtggtgttacacagctttaata
ccaacaggaagacttcgaagccaacctggtctagatagtgaatttcaggc
cagttaggaatacgcaatgaaaccttgtctcaaaaaagaaaagtaaatat
tatgaatatgatgtagttccatgacagaggcttgtctagcatgttcaagg
tatcctctcagaaagaaaagaatggatgccgggcagtgctggcgaatgcc
tttcatcccagcatttgggaggcagagaggcagaggcagaggcagaggca
gaggcagaggcagaggcaggtggatttctgagttccctgtctcgagaaac
caaaattaaaaaagaagaaaagaggggctggtgagatggttcagcgctta
aaagcattgacttctcttccaaaagtcccgagttcaaatcccagcaacat
ggtggctcacaaccatccgtaacgagatttgatgccctcttctggtgcgt
ctgaaaaacaattacagtgtacttacatataataaatagatcttggagga
gttggaggaggaggaggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109195715_109196233
seq2: B6Ng01-287O06.b_510_1036 (reverse)

seq1  CACACACACATAATACATTTATTTA-TTTTGGAGAGTGCAAA-TGTCATG  48
      | ||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  CGCACACACATAATACATTTATTTATTTTTGGAGAGTGCAAATTGTCATG  50

seq1  G-CGTTGA-GTATGGAGGT-CAGAGAACAACTTATG-AAAGTT-GGTTCT  93
      | |||||| |||||||||| |||||||| ||||||| |||||| ||||||
seq2  GCCGTTGAGGTATGGAGGTCCAGAGAACCACTTATGAAAAGTTGGGTTCT  100

seq1  CTCCATCACACAGGTCTTCAGGCTTGGCAGCAAGTGCCCTTACCCACTGT  143
      |||||||||||||||| |||||||||||||||||||||| || |||||||
seq2  CTCCATCACACAGGTCCTCAGGCTTGGCAGCAAGTGCCCCTA-CCACTGT  149

seq1  G-CCATATCATTGACACTTGAGTTAATTTTTATGTATGCTGTGCAGCAGG  192
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATATCATTGACACTTGAGTTAATTTTTATGTATGCTGTGCAGCAGG  199

seq1  GGTCCAACTTCATTCCTCCATAAAATTGAATTTAAAAATATGGCTGGGAA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAACTTCATTCCTCCATAAAATTGAATTTAAAAATATGGCTGGGAA  249

seq1  AGGCTTAGTAAAGTACTTGCTATGCAAGTTTG-AAGATCTGGATATGGTA  291
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGCTTAGTAAAGTACTTGCTATGCAAGTTTGAAAGATCTGGATATGGTA  299

seq1  GCCTGCATCTGTAACCCCAACACAAAGGAAGGTTGGTGTCTTAGTTAGGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATCTGTAACCCCAACACAAAGGAAGGTTGGTGTCTTAGTTAGGG  349

seq1  TTTTTATTGCCATGATAGAACACCATGATCAAGGCTGGCAAGATGGCTCG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTGCCATGATAGAACACCATGATCAAGGCTGGCAAGATGGCTCG  399

seq1  GCAGGTAAGAGCCCTGACTGCTCTTCCAGAGGTACCGAGTTCAAATCCCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTAAGAGCCCTGACTGCTCTTCCAGAGGTACCGAGTTCAAATCCCA  449

seq1  GCAAGCACATGGTGGCTCATAACCACCTGTAATGAGATCTGATGCCCTCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCACATGGTGGCTCATAACCACCTGTAATGAGATCTGATGCCCTCT  499

seq1  TCTGGTGCTGTCTGAAGACAGCTACAGT  519
      ||||||||||||||||||||||||||||
seq2  TCTGGTGCTGTCTGAAGACAGCTACAGT  527


seq1: chr7_109043725_109044501
seq2: B6Ng01-287O06.g_68_838

seq1  GAATTCTCAGAGAACCTGGATAGTCAGACCAGCGATAGCAGGGACTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGAACCTGGATAGTCAGACCAGCGATAGCAGGGACTTGTG  50

seq1  GTATTGAATAAGAATAAGATAGAAGAGCAATTGAGGAAAATTCCCAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAATAAGAATAAGATAGAAGAGCAATTGAGGAAAATTCCCAGCAT  100

seq1  CACTCTTGGGCCTACACATACATACACATGCATACACACACACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGGGCCTACACATACATACACATGCATACACACACACACACACA  150

seq1  CACACACACACACACACACGATGTTCAAACACACATATACATAAGATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACGATGTTCAAACACACATATACATAAGATAAA  200

seq1  ATTTTAAATAGATAAAAAAGAGGCCAGCGTGGTGTTACACAGCTTTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATAGATAAAAAAGAGGCCAGCGTGGTGTTACACAGCTTTAATA  250

seq1  CCAACAGGAAGACTTCGAAGCCAACCTGGTCTAGATAGTGAATTTCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGGAAGACTTCGAAGCCAACCTGGTCTAGATAGTGAATTTCAGGC  300

seq1  CAGTTAGGAATACGCAATGAAACCTTGTCTCAAAAAAGAAAAGTAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGGAATACGCAATGAAACCTTGTCTCAAAAAAGAAAAGTAAATAT  350

seq1  TATGAATATGATGTAGTTCCATGACAGAGGCTTGTCTAGCATGTTCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATGATGTAGTTCCATGACAGAGGCTTGTCTAGCATGTTCAAGG  400

seq1  TATCCTCTCAGAAAGAAAAGAATGGATGCCGGGCAGTGCTGGCGAATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTCAGAAAGAAAAGAATGGATGCCGGGCAGTGCTGGCGAATGCC  450

seq1  TTTCATCCCAGCATTTGGGAGGCAGAGAGGCAGAGGCAGAGGCAGAGGCA  500
      |||||||||||||||||||||||||      |||||||||||||||||||
seq2  TTTCATCCCAGCATTTGGGAGGCAG------AGAGGCAGAGGCAGAGGCA  494

seq1  GAGGCAGAGGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTCCCTGTCTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGAGGCAGAGGCAGGTGGATTTCTGAGTTCCCTGTCTCG  544

seq1  AGAAACCAAAATTAAAAAAGAAGAAAAGAGGGGCTGGTGAGATGGTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAAAATTAAAAAAGAAGAAAAGAGGGGCTGGTGAGATGGTTCAG  594

seq1  CGCTTAAAAGCATTGACTTCTCTTCCAAAAGTCCCGAGTTCAAATCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTAAAAGCATTGACTTCTCTTCCAAAAGTCCCGAGTTCAAATCCCAG  644

seq1  CAACATGGTGGCTCACAACCATCCGTAACGAGATTTGATGCCCTCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGGTGGCTCACAACCATCCGTAACGAGATTTGATGCCCTCTTCTG  694

seq1  GTGCGTCTGAAAAACAATTACAGTGTACTTACATATAATAAATAGATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTCTGAAAAACAATTACAGTGTACTTACATATAATAAATAGATCTT  744

seq1  GGAGGAGTTGGAGGAGGAGGAGGAGGA  777
      |||||||||||||||||||||||| ||
seq2  GGAGGAGTTGGAGGAGGAGGAGGAAGA  771


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