BAC Information

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BAC

Clone NameB6Ng01-288P12
Chromosome7 (Build37)
Map Location 112,085,966 - 112,087,099
singlet/doubletsinglet
Overlap geneOlfr669
Upstream geneOlfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668
Downstream geneEG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288P12.bB6Ng01-288P12.g
ACCGA086495GA086496
length1,2101,151
definitionB6Ng01-288P12.b B6Ng01-288P12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccttaaagagatatcccctctggctatctatcccttgcttcag
ggaagatgagtagggatgagagccctgggatgtatgcttgttatagtgtg
tgttgtgtgtttggcacatgtgttaggtgcagagtgtgcgggcccgcact
ttcgccatggtagcataggcttttgctgcagtggaggtgggacaatctcc
tcagattcagtttgccactctaaaagaaattgtgctgcgttatgccgtgg
ggtgcgaggctaagcacggcacagaggatagcttgctgttggcatcctgt
ggaaggcacgtctgattgcatgaaggttcagtgtcctagttcccttcccc
caggaaaaacgacacgggagctggccaagacctctctgggtgatgagcct
aagggatggttttgagtagggcccctatgcttgcacactggggatcagac
ctctaccttcacccatgaggcttgcttgcagcgataaagatctggccata
gattaataaacatcctggccttttgatgcacctgccgcaagcaaaacaca
atctccccaggtgtggcttggcatattagagaggtagtcagtgataagac
tccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgtttg
tcacccaaggacgggtaaggggcatggctacggggggctatctacagaca
ttctctctgccagaaaagaaaaaaagggggagatgttaggagcaggtgtg
gcggcagtcccaaaggcgccagggactgtagctaagttgtatgacttgca
cctgacttcctcatataagccacaaacatcttgagagctgcgcaggtgca
ccaggataccggtgaatccagtttgatggagatatgcccctgctgccctg
attagctgaagctgcgtgcctggtgaggcggcttggccctgctgttgcgt
ggatgagagtataaaagagtgagaggcccagggttggggggagatataac
aagaagaatcaagactgaataaactgctgttagaaggactggtggtcgtt
gtcctttctgctggtcgagagcgtgaccacgacaattaaagaatgagaat
gctatctcggtgcttatagcaccattcctaggaaagggtacatctccata
gatctgcagagagattctgcctcgagagaagagattccgttcataatatc
cactatgaga
gaattccattaagaatgaaagactgcggggcttcatatgagttgttggaa
atcagcatagctaatttaatagacacacactattgttccagaagactcta
tcctgagaaaaaaataactgaaacataaaacatttaattaatggctttcc
tgatgaaaatttaaaactataatggaattacacttatgagtaggatcagc
taaaagagcagttattgaaaaatgctaatattataggcaataatttaatg
gtttttaaaacaatttgaatggaattttaaagcctaagccttatattaat
ttttaccatgaaatagaagctaaaattgaggaaaataacatgcttaacag
ggttactttgtctctttcttacacacacacacacacacacacacacacac
acacatacacacacacacacacacacacacacacacacacacacacacag
aatcaacctctggtaaattgacatactcctgtaaatttctcctcactgta
ctccagttattcacttcaactaaactcagtgattcatcaattttttaaac
tacataagtagaggatcagttgacattagaggaagacaagggagaacaat
gggggaatatggctaaaacatattatgtaagtgtataataacagtacaat
gaaatctgttatgtgtaatatatatatatatatatactaataaaaacagt
attcatgtaagacaccagtacttcttagtctctctactgcataacttgcc
tttaaagagggcacaacttacagtaataagttattatatgcgaagatcat
ccataatcttttgatattaaaattaattttgtgtgtcagcatgtaatggg
aaaaggttattgttattttccattgcatagcttctctttttcacttcagt
taattctgtatcaataatgtgattttactgtgcataatctaagaagagtt
ttattatgaaaaatgtaacatgctagcaaagcaacaaccacctaaaggat
tattagattcagtaacatttaaagcctagaaacccgaatattctcatttc
tcgagtttaccagtaaattaaacagtgggcaatatgaagaagaagaacaa
attatttcttaactcacctttacaaaccatcattcatctgaatgcaaaag
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112085966_112087099
seq2: B6Ng01-288P12.g_69_1219 (reverse)

seq1  GCTTTTGGCATCAGGATG-ATGATGGTTTTGTAAA-GTGAGTTTAGAAAT  48
      |||||| ||||   |||| ||||||| |||||||| ||||||| ||||||
seq2  GCTTTT-GCATTCAGATGAATGATGG-TTTGTAAAGGTGAGTTAAGAAAT  48

seq1  A--TTG-TCTTC-TCTTCATATTGCCCACTGTTTAATTTACTGGTAAAAC  94
      |  ||| ||||| |||||||||||||||||||||||||||||||| ||||
seq2  AATTTGTTCTTCTTCTTCATATTGCCCACTGTTTAATTTACTGGT-AAAC  97

seq1  TCGAG-AATGAAGATA-TCGGG-TTCTAGGCTTTAATTGTTACTG-ATCT  140
      ||||| |||||  ||| ||||| ||||||||||||| |||||||| ||||
seq2  TCGAGAAATGAGAATATTCGGGTTTCTAGGCTTTAAATGTTACTGAATCT  147

seq1  AAT-ATCCTT--AGTGGTTGTTGCTTTGCTAGCATGTTACATTTTTCATA  187
      ||| ||||||   |||||||||||||||||||||||||||||||||||||
seq2  AATAATCCTTTAGGTGGTTGTTGCTTTGCTAGCATGTTACATTTTTCATA  197

seq1  AT-AAACTCTTCTTAGATTATGCACAGT-AAATCACATTATTGATACAGA  235
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAAAACTCTTCTTAGATTATGCACAGTAAAATCACATTATTGATACAGA  247

seq1  ATTAACTGAAGTG-AAAAGAGAAGCTATGCAATGG-AAATAACAATAACC  283
      ||||||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  ATTAACTGAAGTGAAAAAGAGAAGCTATGCAATGGAAAATAACAATAACC  297

seq1  TTT--CCATTACATGCTGACACACAAAATTAA-TTTAATATCAAAAGATT  330
      |||  ||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTCCCATTACATGCTGACACACAAAATTAATTTTAATATCAAAAGATT  347

seq1  ATGGATGATCTTCGCATATAATAACTTATTACTGTAAGTTGTGCCCTCTT  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGATCTTCGCATATAATAACTTATTACTGTAAGTTGTGCCCTCTT  397

seq1  TAAAGGCAAGTTATGCAGTAGAGAGACTAAGAAGTACTGGTGTCTTACAT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAAGTTATGCAGTAGAGAGACTAAGAAGTACTGGTGTCTTACAT  447

seq1  GAATACTGTTTTTATTAGTATATATATATATATATATTACACATAACAGA  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTGTTTTTATTAGTATATATATATATATATATTACACATAACAGA  497

seq1  TTTCATTGTACTGTTATTATACACTTACATAATATGTTTTAGCCATATTC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGTACTGTTATTATACACTTACATAATATGTTTTAGCCATATTC  547

seq1  CCCCATTGTTCTCCCTTGTCTTCCTCTAATGTCAACTGATCCTCTACTTA  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTGTTCTCCCTTGTCTTCCTCTAATGTCAACTGATCCTCTACTTA  597

seq1  TGTAGTTTAAAAAATTGATGAATCACTGAGTTTAGTTGAAGTGAATAACT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTAAAAAATTGATGAATCACTGAGTTTAGTTGAAGTGAATAACT  647

seq1  GGAGTACAGTGAGGAGAAATTTACAGGAGTATGTCAATTTACCAGAGGTT  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACAGTGAGGAGAAATTTACAGGAGTATGTCAATTTACCAGAGGTT  697

seq1  GATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  747

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAAAGAGACAAAGT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAAAGAGACAAAGT  797

seq1  AACCCTGTTAAGCATGTTATTTTCCTCAATTTTAGCTTCTATTTCATGGT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTTAAGCATGTTATTTTCCTCAATTTTAGCTTCTATTTCATGGT  847

seq1  AAAAATTAATATAAGGCTTAGGCTTTAAAATTCCATTCAAATTGTTTTAA  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAATATAAGGCTTAGGCTTTAAAATTCCATTCAAATTGTTTTAA  897

seq1  AAACCATTAAATTATTGCCTATAATATTAGCATTTTTCAATAACTGCTCT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTAAATTATTGCCTATAATATTAGCATTTTTCAATAACTGCTCT  947

seq1  TTTAGCTGATCCTACTCATAAGTGTAATTCCATTATAGTTTTAAATTTTC  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGATCCTACTCATAAGTGTAATTCCATTATAGTTTTAAATTTTC  997

seq1  ATCAGGAAAGCCATTAATTAAATGTTTTATGTTTCAGTTATTTTTTTCTC  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAAAGCCATTAATTAAATGTTTTATGTTTCAGTTATTTTTTTCTC  1047

seq1  AGGATAGAGTCTTCTGGAACAATAGTGTGTGTCTATTAAATTAGCTATGC  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGAGTCTTCTGGAACAATAGTGTGTGTCTATTAAATTAGCTATGC  1097

seq1  TGATTTCCAACAACTCATATGAAGCCCCGCAGTCTTTCATTCTTAATGGA  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCAACAACTCATATGAAGCCCCGCAGTCTTTCATTCTTAATGGA  1147

seq1  ATTC  1134
      ||||
seq2  ATTC  1151