BAC Information

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BAC

Clone NameB6Ng01-289L20
Chromosome7 (Build37)
Map Location 14,059,765 - 14,060,820
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp606, 2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767
Downstream geneLOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289L20.bB6Ng01-289L20.g
ACCGA087055GA087056
length1,040935
definitionB6Ng01-289L20.b B6Ng01-289L20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcccacaccaaaatatagtaaaggcaaaatattgtattgac
ccctgtcacatggtcatggactcagttatggctctcaggagcagctcgga
cagggaccacgccagcaccttaggtggcagagatggcaactcacaggcaa
ctcctctccaccctcgagtctccagtcccatcccacttcatactactcaa
gctgttccacttctctttctcttccatctgatcaccacatactcacacat
tgtgatggctcctgctgcaggctggtcacacagttggcaggcctctggct
gacatccttcatccatgatatacagggcatggcagcaagtggatgtctat
ggcccaaatgagccatgtactggagggcaagcctatggttgacatgacag
tctacaggtttctgtttgtcttcctcttcccacaatgtactgcctggatt
tgatttgatttgatttgatttgatttgatttgatttgatttgatttgatt
tgatttgatttgatttgatttgacttgatttgacttgatttttatgagtc
ctaggtttaaggcagctttggccacctagccaggcatcaggctaggatga
acaaagggctgccatctgctctggccctgactgatttaaaaacagcacca
acaaggtgtctttttgcccattgccagaggtgtctaatttttaattacat
ttatttatctttaattgtgtagaaggaagaagggtcagaggacaatttgc
aggagtgtgttctcttcttctactatatggattctccttctactatatgg
aactcagtcatcaagtttggtggcaagcactttacccactgaatcatctg
attagacctacgtgtgattttcaaataccccatatgcagcaggcatgatg
gttaggcactttattccagccacttgggaggcttatggtagaaactcacc
agtttaagaaacattgcttatttaccaatgttatgaacattgcaattgca
acctggagaggggccagctcagtcacctatttaagccaaa
gaattctctatttaattctatacccccttttttgattggtttgtttgatt
ttttggaggctaccttttttaattctttatatattttagatattagccct
atatcggatgtggggttagtgaagattatttcccaatctgaaggttgcct
atttgccctattgactgtatcctttgctgtacagaagcttttcagtttta
tgaggtcccgtttatcaatgctggatcttagagagtgagccattagagtt
ttgtttaagaaatctcctcttcccccagaccccgccccactgcccctagc
cgatgagattgaggttctttcccactttctcttctattagatttagtatg
tctggttttatgttgaggtccttgatccacttggacttgagttttgtgca
aggtgacaaatatgtatctattttcatttttccacatacagaccgccagt
tagtccagcaccacttattgaagatgctttcttttttccattgtatattt
ttggcttctttatcaaagatcaagtgtccttaagtgtgtggttttatttc
atggtcttaaattttattccattgagcaacctgtctgtctctctaccaat
accattgctctgtactatagcttgaggtcagggtggtaatttcccagaaa
ctctttttttttccttttcttttattgttaagaattgtttttgctatact
gaactttttgcttttactgatggattttagaattgctctttctatgtctt
gaagtatatgtggaaatttaatgaagattgtgtgaatttgtagatgcttt
tgtgggatgccattcactatgtcaatctaatcaatccatgagcatggcag
atctctccaattttcgaggtcttcttcgtgtcccaggagaattgacagtc
tttttctatctaatgagggggtgtggatccctaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14059765_14060820
seq2: B6Ng01-289L20.b_49_1088 (reverse)

seq1  TTTGGGCCTTAAATAGGTTCACACTGAGCT-GCCCCTCTCAGTGTCTGCA  49
      |||||  |||||||||||    |||||||| |||||||||   || ||||
seq2  TTTGG--CTTAAATAGGT---GACTGAGCTGGCCCCTCTCCAGGT-TGCA  44

seq1  TTTTGCAATGTTCATAACATTTTGGTAAATAAGCATGGTTTTCCTTAAAC  99
        |||||||||||||||||  ||||||||||||||  ||||  |||||||
seq2  -ATTGCAATGTTCATAACA--TTGGTAAATAAGCAATGTTT--CTTAAAC  89

seq1  TGGTGAGTTTCCTACCAT-AGCCTCCCAAGTGCTGGGATTACAGTGCCTT  148
      |||||||||| ||||||| |||||||||||||   ||| || ||||||| 
seq2  TGGTGAGTTT-CTACCATAAGCCTCCCAAGTGGCTGGAATAAAGTGCCTA  138

seq1  ACCATCATGCCTGCTGCAATATTGGGGTATTTGAAAATCACACCGTAGGG  198
      ||||||||||||||||| ||| |||||||||||||||||||| |||| ||
seq2  ACCATCATGCCTGCTGC-ATA-TGGGGTATTTGAAAATCACA-CGTA-GG  184

seq1  TCTAATCAGATGATTCAGTGGGTAAAAGTGCTTGCCACCAAACTTGATGA  248
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTAATCAGATGATTCAGTGGGT-AAAGTGCTTGCCACCAAACTTGATGA  233

seq1  CCTGAGTTCCATATAGTAGAAGGAGAATCCATATAGTAGAAGAAGAGAAC  298
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGAGTTCCATATAGTAGAAGGAGAATCCATATAGTAGAAGAAGAGAAC  282

seq1  ACACTCCTGCAAATTGTCCTCTGACCCTTCTTCCTTCTACACAATTAAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCTGCAAATTGTCCTCTGACCCTTCTTCCTTCTACACAATTAAAG  332

seq1  ATAAATAAATGTAATTAAAAATTAGACACCTCTGGCAATGGGCAAAAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATGTAATTAAAAATTAGACACCTCTGGCAATGGGCAAAAAGA  382

seq1  CACCTTGTTGGTGCTGTTTTTAAATCAGTCAGGGCCAGAGCAGATGGCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGTTGGTGCTGTTTTTAAATCAGTCAGGGCCAGAGCAGATGGCAG  432

seq1  CCCTTTGTTCATCCTAGCCTGATGCCTGGCTAGGTGGCCAAAGCTGCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTTCATCCTAGCCTGATGCCTGGCTAGGTGGCCAAAGCTGCCTT  482

seq1  AAACCTAGGACTCATAAAAATCAAGTCAAATCAAGTCAAATCAAATCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAGGACTCATAAAAATCAAGTCAAATCAAGTCAAATCAAATCAAA  532

seq1  TCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAA  582

seq1  TCAAATCAAATCCAGGCAGTACATTGTGGGAAGAGGAAGACAAACAGAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAAATCCAGGCAGTACATTGTGGGAAGAGGAAGACAAACAGAAA  632

seq1  CCTGTAGACTGTCATGTCAACCATAGGCTTGCCCTCCAGTACATGGCTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGACTGTCATGTCAACCATAGGCTTGCCCTCCAGTACATGGCTCA  682

seq1  TTTGGGCCATAGACATCCACTTGCTGCCATGCCCTGTATATCATGGATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCCATAGACATCCACTTGCTGCCATGCCCTGTATATCATGGATGA  732

seq1  AGGATGTCAGCCAGAGGCCTGCCAACTGTGTGACCAGCCTGCAGCAGGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTCAGCCAGAGGCCTGCCAACTGTGTGACCAGCCTGCAGCAGGAG  782

seq1  CCATCACAATGTGTGAGTATGTGGTGATCAGATGGAAGAGAAAGAGAAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACAATGTGTGAGTATGTGGTGATCAGATGGAAGAGAAAGAGAAGT  832

seq1  GGAACAGCTTGAGTAGTATGAAGTGGGATGGGACTGGAGACTCGAGGGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGCTTGAGTAGTATGAAGTGGGATGGGACTGGAGACTCGAGGGTG  882

seq1  GAGAGGAGTTGCCTGTGAGTTGCCATCTCTGCCACCTAAGGTGCTGGCGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGTTGCCTGTGAGTTGCCATCTCTGCCACCTAAGGTGCTGGCGT  932

seq1  GGTCCCTGTCCGAGCTGCTCCTGAGAGCCATAACTGAGTCCATGACCATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTGTCCGAGCTGCTCCTGAGAGCCATAACTGAGTCCATGACCATG  982

seq1  TGACAGGGGTCAATACAATATTTTGCCTTTACTATATTTTGGTGTGGGCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGGGTCAATACAATATTTTGCCTTTACTATATTTTGGTGTGGGCC  1032

seq1  TTGAATTC  1056
      ||||||||
seq2  TTGAATTC  1040