BAC Information

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BAC

Clone NameB6Ng01-289O15
Chromosome7 (Build37)
Map Location 131,038,686 - 131,142,391
singlet/doubletdoublet
Overlap geneEG628779
Upstream gene4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289O15.bB6Ng01-289O15.g
ACCGA087185GA087186
length5021,179
definitionB6Ng01-289O15.b B6Ng01-289O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,141,884 - 131,142,391)(131,038,686 - 131,039,686)
sequence
acttctggataaaagcagaacagagaatccggccccagcctccgtctgca
cacagccagcagaacccacggtgcttctgatttactcggttgtgttgcag
tgcaagactgcatttccacagaagtctagaagcagacatctgttgtgttg
gcatccatatacattcccccacccccccgagaactatatcctggttttgc
tctaggaaaaatccctgcatcccagcactgtgtgcccggaaaactcctga
cctccactctctgctcctcagaggcagcgagctttggggagagactggag
tctctactgcctacaatttaggaaaagggatcaggtgattgctctcttca
tagccacaatgcagaaagttttatgaatatagccaacagcctcggcagca
gaatctaaaaattaaaatctggtggcatcattaagccaagattgagccac
accttgaaaactaaagatccctgggaagacctgggaggggtgggggggtg
gt

gaattctctgtttaggtttatattccattttttaattggttctttggttt
tttggaggttagcctcctgagttctttatatattttggagaagagactga
ggaaaagaaggtacagtgactggaccaacttgggatccaactcaagggga
ggctccaaggcctgacactgttactgatgctatggtgtgcttacagatag
gagcctaatatggctcctttccaagaggcccaacatcagctgactgagac
agaagcaggtacttacacccaaccattggactgaagttggggatccctgt
gattgacttagggaaaggctagaacaagctgagaaggatggtattcccat
aggaagaccagcagtctcaactaaccaggacccctgagattcctcagaca
ctgagccactaaccaggcagcctacaggagctggttgaaggtccctgaca
catagacagaagtgaactgcctggtctattatcagtggatgaagatgtgt
ctaaccctcaagagacttgggccccagatagtgggaaagcctggcaggga
ggggcatcctcttagagaccaggggtggagaaataggctgaggaactgtg
agagggcactctgggaggaggcaataactggaatgtaaaaaataaaagta
ataataaataaaacccaggaactatcagaaaaaaagtagtattgatcttg
gtacatattgtcatgtctatataagcatacctaagatactttccaaccta
tttttatgaactaggctctctcactgaaactggagttttggcgggttgct
agataagctggtcatctagtcctttagtactctcggatgtgtccaccaat
aactagtattgaagttaaaaattttgtgttgctatgcccagcttttacaa
tgggtgatggaaatccctaacttggaatccttcatgtttccacagcaagc
acttttaccaaactttagcttatctcctcaaccgggtttctgggttgttt
tgtttgttttgaataatatctagaatataatcctttgagtataggaaaaa
tagtaaggtgtctaccctaatggcttaaatctaactaaggtgaataaatc
cattccaatcaccaccattccttgaaggtaccaatttttaaataatacag
tgaactatccacatcatgtgtggagccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_131141884_131142391
seq2: B6Ng01-289O15.b_50_557 (reverse)

seq1  ACCACCCCCCCACCCCTCCCAGGTCTTCCCAGGGATCTTTAGTTTTCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCCCCCACCCCTCCCAGGTCTTCCCAGGGATCTTTAGTTTTCAAG  50

seq1  GTGTGGCTCAATCTTGGCTTAATGATGCCACCAGATTTTAATTTTTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCTCAATCTTGGCTTAATGATGCCACCAGATTTTAATTTTTAGAT  100

seq1  TCTGCTGCCGAGGCTGTTGGCTATATTCATAAAACTTTCTGCATTGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCCGAGGCTGTTGGCTATATTCATAAAACTTTCTGCATTGTGGC  150

seq1  TATGAAGAGAGCAATCACCTGATCCCTTTTCCTAAATTGTAGGCAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAGAGCAATCACCTGATCCCTTTTCCTAAATTGTAGGCAGTAGA  200

seq1  GACTCCAGTCTCTCCCCAAAGCTCGCTGCCTCTGAGGAGCAGAGAGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGTCTCTCCCCAAAGCTCGCTGCCTCTGAGGAGCAGAGAGTGGA  250

seq1  GGTCAGGAGTTTTCCGGGCACACAGTGCTGGGATGCAGGGATTTTTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGAGTTTTCCGGGCACACAGTGCTGGGATGCAGGGATTTTTCCTA  300

seq1  GAGCAAAACCAGGATATAGTTCTCGGGGGGGTGGGGGAATGTATATGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAACCAGGATATAGTTCTCGGGGGGGTGGGGGAATGTATATGGAT  350

seq1  GCCAACACAACAGATGTCTGCTTCTAGACTTCTGTGGAAATGCAGTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACACAACAGATGTCTGCTTCTAGACTTCTGTGGAAATGCAGTCTTG  400

seq1  CACTGCAACACAACCGAGTAAATCAGAAGCACCGTGGGTTCTGCTGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAACACAACCGAGTAAATCAGAAGCACCGTGGGTTCTGCTGGCTG  450

seq1  TGTGCAGACGGAGGCTGGGGCCGGATTCTCTGTTCTGCTTTTATCCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGACGGAGGCTGGGGCCGGATTCTCTGTTCTGCTTTTATCCAGAA  500

seq1  GTGAATTC  508
      ||||||||
seq2  GTGAATTC  508


seq1: chr7_131038686_131039686
seq2: B6Ng01-289O15.g_217_1248

seq1  GGAGGCTCCAAGGCCTGACACTGTTACTGATGCTATGGTGTGCTTACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTCCAAGGCCTGACACTGTTACTGATGCTATGGTGTGCTTACAGA  50

seq1  TAGGAGCCTAATATGGCTCCTTTCCAAGAGGCCCAACATCAGCTGACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCTAATATGGCTCCTTTCCAAGAGGCCCAACATCAGCTGACTGA  100

seq1  GACAGAAGCAGGTACTTACACCCAACCATTGGACTGAAGTTGGGGATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGCAGGTACTTACACCCAACCATTGGACTGAAGTTGGGGATCCC  150

seq1  TGTGATTGACTTAGGGAAAGGCTAGAACAAGCTGAGAAGGATGGTATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGACTTAGGGAAAGGCTAGAACAAGCTGAGAAGGATGGTATTCC  200

seq1  CATAGGAAGACCAGCAGTCTCAACTAACCAGGACCCCTGAGATTCCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAGACCAGCAGTCTCAACTAACCAGGACCCCTGAGATTCCTCAG  250

seq1  ACACTGAGCCACTAACCAGGCAGCCTACAGGAGCTGGTTGAAGGTCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGCCACTAACCAGGCAGCCTACAGGAGCTGGTTGAAGGTCCCTG  300

seq1  ACACATAGACAGAAGTGAACTGCCTGGTCTATTATCAGTGGATGAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAGACAGAAGTGAACTGCCTGGTCTATTATCAGTGGATGAAGATG  350

seq1  TGTCTAACCCTCAAGAGACTTGGGCCCCAGATAGTGGGAAAGCCTGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAACCCTCAAGAGACTTGGGCCCCAGATAGTGGGAAAGCCTGGCAG  400

seq1  GGAGGGGCATCCTCTTAGAGACCAGGGGTGGAGAAATAGGCTGAGGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGCATCCTCTTAGAGACCAGGGGTGGAGAAATAGGCTGAGGAACT  450

seq1  GTGAGAGGGCACTCTGGGAGGAGGCAATAACTGGAATGTAAAAAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGGGCACTCTGGGAGGAGGCAATAACTGGAATGTAAAAAATAAAA  500

seq1  GTAATAATAAATAAAACCCAGGAACTATCAGAAAAAAAGTAGTATTGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAATAAATAAAACCCAGGAACTATCAGAAAAAAAGTAGTATTGATC  550

seq1  TTGGTACATATTGTCATGTCTATATAAGCATACCTAAGATACTTTCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACATATTGTCATGTCTATATAAGCATACCTAAGATACTTTCCAAC  600

seq1  CTATTTTTATGAACTAGGCTCTCTCACTGAAACTGGAGTTTTGGCGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTATGAACTAGGCTCTCTCACTGAAACTGGAGTTTTGGCGGGTT  650

seq1  GCTAGATAAGCTGGTCATCTAGTCCTTTAGTACTCTCGGATGTGTCCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGATAAGCTGGTCATCTAGTCCTTTAGTACTCTCGGATGTGTCCACC  700

seq1  -ATAACTAGTATTGAAGTTATAAA-TTTGTGTTGCTATGCCCAGCTTTTA  748
       ||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  AATAACTAGTATTGAAGTTAAAAATTTTGTGTTGCTATGCCCAGCTTTTA  750

seq1  C-ATGGGTGATGGAA--TCCTAACTTGG-ATCC-TCATG-TTCCACAGCA  792
      | |||||||||||||   |||||||||| |||| ||||| ||||||||||
seq2  CAATGGGTGATGGAAATCCCTAACTTGGAATCCTTCATGTTTCCACAGCA  800

seq1  AGCAC-TTTACCAA--CTTAGC-TATCTCCTCAACC-GGTTTCTGGG-TG  836
      ||||| ||||||||   ||||| ||||||||||||| |||||||||| ||
seq2  AGCACTTTTACCAAACTTTAGCTTATCTCCTCAACCGGGTTTCTGGGTTG  850

seq1  TTTTGTTTTGTTTTGA--TATATCTAGAATATA--TCTTTGAGTATAGG-  881
      ||||| ||||||||||   ||||||||||||||   ||||||||||||| 
seq2  TTTTG-TTTGTTTTGAATAATATCTAGAATATAATCCTTTGAGTATAGGA  899

seq1  AAAATAGT-AGGTGTCTACCCT-ATGGC-TAAATCTTACTTA-GTGAATA  927
      |||||||| ||||||||||||| ||||| ||||||| ||| | |||||||
seq2  AAAATAGTAAGGTGTCTACCCTAATGGCTTAAATCTAACTAAGGTGAATA  949

seq1  AATC--ATCCCATCACCACCAT--CCTGAA-GTA-CTATTTTTTAATAAT  971
      ||||   ||| |||||||||||  | |||| ||| | |||||| ||||||
seq2  AATCCATTCCAATCACCACCATTCCTTGAAGGTACCAATTTTTAAATAAT  999

seq1  ACA-TTAACTATCCACATCCATGT---GAGCCTA  1001
      ||| | |||||||||||| |||||   |||||||
seq2  ACAGTGAACTATCCACAT-CATGTGTGGAGCCTA  1032


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