BAC Information

Click to search

BAC

Clone NameB6Ng01-289O21
Chromosome7 (Build37)
Map Location 101,273,731 - 101,274,896
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040298, LOC666783, EG638305
Downstream geneEG545982, EG666816, LOC100040132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289O21.bB6Ng01-289O21.g
ACCGA087197GA087198
length1,2021,173
definitionB6Ng01-289O21.b B6Ng01-289O21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaaaagcctagata
cttctgtgttacgttgtctgtgaagtgagttctacatgtataaattgaac
atttctagtggcatttctttggatatagagactattaatgaattatcacc
tagaagatgttaagagtaccttgacaataacctacaggtctctgcttcac
tttaaatcctttccatcaagagggaaaccagatccagtaccaggaaccta
gtttaattgctcaatgctactaaagtcagttattggaagagaacctctga
tgagtactttactaaaacaacagcatcatccttaacagcaacatcaatgt
ttgttcttatacccacagagcaatataatcttcattccttatcaaggaaa
tttctcttggccacagaaatataattatggaaaaccatacccaaatagaa
tgcagagctcagggagcctagtctcaatagattcatttacaaacactccc
aacataaagctcatggaactttgcagaagttgggaagaaagattatcttc
accagagactagggagttttctatgagatcgtctcctgtgatgctatagg
ctataaccataaagtcttacccagtaagactgtcaaacttgatctgacag
gagccaatatctgatcctacacacagaaatataggccactacggaatgct
agagcaggagaaaataatccttgtcagggacaaagctacccaagtgctat
taatcaatgtctcagaactgcattacacataccagtaacctgtatttcta
ct

gaattctaaagtttcaaattcagtagacctttgaataggcacataggtgg
ttatctgtacatatgtcttttatgtttatgttgcaccaatctgccttgct
tatattagttgtcttaattttaattcctgtttataaactaaaccttctca
aactctcttaagtgcttagaattttttacatgataagagcagtcttcttg
gatccttattatatgtacacatggatgtatgtaagcctgtaaagaacgtt
ctatgccacttatgattttatttcaatcaaattaaaataactatgacata
tacttcagccttttaattaagtatgccctgatcaatattatgcatgttgt
aatctgatgagatgtgccctaactaacaacaattttcttggccagcagat
aaaataactgatagagcacagcaatattttatgtaaggaaaaacaaaaca
cagtatggtttccatgttggtggaagtggaattacatgatatattttatc
acagaaagatacagctctctttttagaagaaatgttgagatgacactaat
tggatcacatactataacctctatcattttgcttttaaaataatatgtta
gaattccaacggtagtactgagtaggcatgaataagcagtaatgttacat
tttatgcaacctaactctgtcaagtatcctaagtttctgtttaacaccaa
gaaaaatgttttatttaaattatgtatatttaaagaaactgaatattaat
gtgatgttaattcatcaagtccacaaatccagatgcatctattctgcttc
tcagaatgaaactaatgattccatttcaaagttttaattaaatctgattg
tacagtcttaactgaatatattttctttcttaattgatagttttaataaa
ttatataatgtatatatgttaaattatcaatttcccattctactcattgg
ttcttaacagtgttccttatgagtattagccttttctcttaactgtatga
ctatgagtattagatagtgaaattgttaaacatatcaattaaagattatt
aatggaaaagtgtatagttaaggtagaatatattataggcttacgtacca
aggaatatttatagagatttggtacagaagttacgagatctcaatactga
cttagagcttactctactggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101273731_101274896
seq2: B6Ng01-289O21.g_70_1242

seq1  GAATTCTAAAGTTTCAAATTCAGTAGACCTTTGAATAGGCACATAGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGTTTCAAATTCAGTAGACCTTTGAATAGGCACATAGGTGG  50

seq1  TTATCTGTACATATGTCTTTTATGTTTATGTTGCACCAATCTGCCTTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTACATATGTCTTTTATGTTTATGTTGCACCAATCTGCCTTGCT  100

seq1  TATATTAGTTGTCTTAATTTTAATTCCTGTTTATAAACTAAACCTTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGTTGTCTTAATTTTAATTCCTGTTTATAAACTAAACCTTCTCA  150

seq1  AACTCTCTTAAGTGCTTAGAATTTTTTACATGATAAGAGCAGTCTTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTTAAGTGCTTAGAATTTTTTACATGATAAGAGCAGTCTTCTTG  200

seq1  GATCCTTATTATATGTACACATGGATGTATGTAAGCCTGTAAAGAACGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTATTATATGTACACATGGATGTATGTAAGCCTGTAAAGAACGTT  250

seq1  CTATGCCACTTATGATTTTATTTCAATCAAATTAAAATAACTATGACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCACTTATGATTTTATTTCAATCAAATTAAAATAACTATGACATA  300

seq1  TACTTCAGCCTTTTAATTAAGTATGCCCTGATCAATATTATGCATGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGCCTTTTAATTAAGTATGCCCTGATCAATATTATGCATGTTGT  350

seq1  AATCTGATGAGATGTGCCCTAACTAACAACAATTTTCTTGGCCAGCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGATGAGATGTGCCCTAACTAACAACAATTTTCTTGGCCAGCAGAT  400

seq1  AAAATAACTGATAGAGCACAGCAATATTTTATGTAAGGAAAAACAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTGATAGAGCACAGCAATATTTTATGTAAGGAAAAACAAAACA  450

seq1  CAGTATGGTTTCCATGTTGGTGGAAGTGGAATTACATGATATATTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGGTTTCCATGTTGGTGGAAGTGGAATTACATGATATATTTTATC  500

seq1  ACAGAAAGATACAGCTCTCTTTTTAGAAGAAATGTTGAGATGACACTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGATACAGCTCTCTTTTTAGAAGAAATGTTGAGATGACACTAAT  550

seq1  TGGATCACATACTATAACCTCTATCATTTTGCTTTTAAAATAATATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCACATACTATAACCTCTATCATTTTGCTTTTAAAATAATATGTTA  600

seq1  GAATTCCAACGGTAGTACTGAGTAGGCATGAATAAGCAGTAATGTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACGGTAGTACTGAGTAGGCATGAATAAGCAGTAATGTTACAT  650

seq1  TTTATGCAACCTAACTCTGTCAAGTATCCTAAGTTTCTGTTTAACACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAACCTAACTCTGTCAAGTATCCTAAGTTTCTGTTTAACACCAA  700

seq1  GAAAAATGTTTTATTTAAATTATGTATATTTAAAGAAACTGAATATTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGTTTTATTTAAATTATGTATATTTAAAGAAACTGAATATTAAT  750

seq1  GTGATGTTAATTCATCAAGTCCACAAATCCAGATGCATCTATTCTGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTAATTCATCAAGTCCACAAATCCAGATGCATCTATTCTGCTTC  800

seq1  TCAGAATGAAACTAATGATTCCATTTCAAAGTTTTAATTAAATCTGATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGAAACTAATGATTCCATTTCAAAGTTTTAATTAAATCTGATTG  850

seq1  TACAGTCTTAACTGAATATATTTTCTTTCTTAATTGATAGTTTTAATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCTTAACTGAATATATTTTCTTTCTTAATTGATAGTTTTAATAAA  900

seq1  TTATATAATGTATATATGTT-AATTATCAATTTCCCATTCTACTCATTTG  949
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TTATATAATGTATATATGTTAAATTATCAATTTCCCATTCTACTCA-TTG  949

seq1  TTTCTTACAAGTGTTTCTTATGAGTATTAG-CTTTTCTCTTAACTGTATG  998
       ||||||  |||||| |||||||||||||| |||||||||||||||||||
seq2  GTTCTTAACAGTGTTCCTTATGAGTATTAGCCTTTTCTCTTAACTGTATG  999

seq1  ACTATGAGTATTAGAATAGTGAAATTGTTAAACATATTCATTAAAGATAT  1048
      |||||||||||||| ||||||||||||||||||||||  |||||||||  
seq2  ACTATGAGTATTAG-ATAGTGAAATTGTTAAACATATCAATTAAAGATTA  1048

seq1  ATAATGGAAAAGTGTAAAAATTAAGTAG-ATATATTATAG--CTACATAC  1095
       ||||||||||||||| |  | | |||| |||||||||||   ||| |||
seq2  TTAATGGAAAAGTGTATAGTTAAGGTAGAATATATTATAGGCTTACGTAC  1098

seq1  CAAG--ATATATATAGAGATAT-GTACCAAGAAATACAGAGATACTCAAT  1142
      ||||  |||| ||||||||| | ||||  |||| |   ||||| ||||||
seq2  CAAGGAATATTTATAGAGATTTGGTAC--AGAAGTTACGAGAT-CTCAAT  1145

seq1  ACTGAC-TAGAGCT---ACTACTGGAAG  1166
      |||||| |||||||    ||||||||||
seq2  ACTGACTTAGAGCTTACTCTACTGGAAG  1173


| Home | SequenceCutter | Blast | Download |