BAC Information

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BAC

Clone NameB6Ng01-290D09
Chromosome7 (Build37)
Map Location 62,370,129 - 62,459,370
singlet/doubletdoublet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290D09.bB6Ng01-290D09.g
ACCGA087406GA087407
length669944
definitionB6Ng01-290D09.b B6Ng01-290D09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,458,702 - 62,459,370)(62,370,129 - 62,370,651)
sequence
gaattcacatttaccagcatgttatcctggtttctaaagagcagttgtta
tatcagtacacacactgtgtctatattaaatacaggaaattactgtgaag
ggcacaacaccggaagacttatgatagtcaggacacttagccagaaagta
aactagttaatcatgttaactttataagtttacctgagaaaccataatgc
actaaacattacaaaacgatgccacctcataaagcccagtattgattcca
gagcagcttcccttctcacaaaatcaataactaagatttgtagatgaata
atattttccaagtatgaaacaaataagagtgaaaatacatttaaaattca
tgaacaattaaagttgccttgtgagattctaatagctaagccagagtaag
agttagaagcaaccgaagaagggaagttcagtcagtgttcctcagagagt
ccctttgacaacagcataaccacaccatccatttactcacaggtacactt
cacagggagctataaaatggatggagtgagaaagagctcatttcctggac
gaggtctcaatcctaagtggtcagacttaaatgcttgaaaataagggcaa
aatttactaggattggttctctctctctctctctctctctctctctctct
ctctctctctctctctctc

gaattctgaataaagaataaaaagaggggggacagccggccaccatccgg
accggaggacaggtgcccgcccggctggggaggcggcctaagccacagca
gcagcggtcgccatcttggtccgagacccgccgaacttaggaaattagtc
tgaacaggtgagagggtgcgccagagaacctgacagcttctggaacaggc
agaagcacagaggcgctgaggcagcaccctgtgtgggccggggacagccg
gccaccttccggaccagaggacaggtgcccacccggctggggaggcggcc
taagccacagcagcagcggtcgccatcttggtcccgggactccaaggaac
ttaggaatttagtctgcttaggtgagagtctgtaccacctgggaactgcc
aaagcaacacagtgtctgagaaaggtcctgttttgggccttcttcttcgg
ccaggaggaggtccaaaaacaagatatctgcgcaccttccctgtaagaga
gcttgccagcagagagtgctctgagcactgaaactcagaggagagaatct
gtctcccaggtctgctgatagacgacggtaacagaatcaccagaagaaca
atctctaaacagagtcaactataactactaactccagagattaccagatg
gcgaaaggtaaacggaggaatcttactaacaggaaccaagaccactcacc
atcaccagaacccagcacacccacttcgcccagtccagggaaccccaaca
cacctgagaacctagacctagatttaaaagcatatctcatgatgatggta
gaggacatcaagaaggactttaataaatcacttaaagaaatacaggagaa
cactgctaaagagttacaagtccttaaagaaaaacagggaaaacacaatc
aaacaggtagaagtcctttacagaaaaagaggaaaaaacataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62458702_62459370
seq2: B6Ng01-290D09.b_44_712 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GAACCAATCCTAGTAAATTTTGCCCTTATTTTCAAGCATTTAAGTCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATCCTAGTAAATTTTGCCCTTATTTTCAAGCATTTAAGTCTGAC  100

seq1  CACTTAGGATTGAGACCTCGTCCAGGAAATGAGCTCTTTCTCACTCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGGATTGAGACCTCGTCCAGGAAATGAGCTCTTTCTCACTCCATC  150

seq1  CATTTTATAGCTCCCTGTGAAGTGTACCTGTGAGTAAATGGATGGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATAGCTCCCTGTGAAGTGTACCTGTGAGTAAATGGATGGTGTGG  200

seq1  TTATGCTGTTGTCAAAGGGACTCTCTGAGGAACACTGACTGAACTTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGTTGTCAAAGGGACTCTCTGAGGAACACTGACTGAACTTCCCT  250

seq1  TCTTCGGTTGCTTCTAACTCTTACTCTGGCTTAGCTATTAGAATCTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGGTTGCTTCTAACTCTTACTCTGGCTTAGCTATTAGAATCTCACA  300

seq1  AGGCAACTTTAATTGTTCATGAATTTTAAATGTATTTTCACTCTTATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTTTAATTGTTCATGAATTTTAAATGTATTTTCACTCTTATTTG  350

seq1  TTTCATACTTGGAAAATATTATTCATCTACAAATCTTAGTTATTGATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACTTGGAAAATATTATTCATCTACAAATCTTAGTTATTGATTTT  400

seq1  GTGAGAAGGGAAGCTGCTCTGGAATCAATACTGGGCTTTATGAGGTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAGGGAAGCTGCTCTGGAATCAATACTGGGCTTTATGAGGTGGCA  450

seq1  TCGTTTTGTAATGTTTAGTGCATTATGGTTTCTCAGGTAAACTTATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTGTAATGTTTAGTGCATTATGGTTTCTCAGGTAAACTTATAAAG  500

seq1  TTAACATGATTAACTAGTTTACTTTCTGGCTAAGTGTCCTGACTATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGATTAACTAGTTTACTTTCTGGCTAAGTGTCCTGACTATCATA  550

seq1  AGTCTTCCGGTGTTGTGCCCTTCACAGTAATTTCCTGTATTTAATATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCGGTGTTGTGCCCTTCACAGTAATTTCCTGTATTTAATATAGA  600

seq1  CACAGTGTGTGTACTGATATAACAACTGCTCTTTAGAAACCAGGATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTGTGTACTGATATAACAACTGCTCTTTAGAAACCAGGATAACA  650

seq1  TGCTGGTAAATGTGAATTC  669
      |||||||||||||||||||
seq2  TGCTGGTAAATGTGAATTC  669


seq1: chr7_62370129_62370651
seq2: B6Ng01-290D09.g_66_588

seq1  GAATTCTGAATAAAGAATAAAAAGAGGGGGGACAGCCGGCCACCATCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATAAAGAATAAAAAGAGGGGGGACAGCCGGCCACCATCCGG  50

seq1  ACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGCCACAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGCCACAGCA  100

seq1  GCAGCGGTCGCCATCTTGGTCCGAGACCCGCCGAACTTAGGAAATTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGGTCGCCATCTTGGTCCGAGACCCGCCGAACTTAGGAAATTAGTC  150

seq1  TGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGC  200

seq1  AGAAGCACAGAGGCGCTGAGGCAGCACCCTGTGTGGGCCGGGGACAGCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACAGAGGCGCTGAGGCAGCACCCTGTGTGGGCCGGGGACAGCCG  250

seq1  GCCACCTTCCGGACCAGAGGACAGGTGCCCACCCGGCTGGGGAGGCGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTCCGGACCAGAGGACAGGTGCCCACCCGGCTGGGGAGGCGGCC  300

seq1  TAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCCGGGACTCCAAGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCCGGGACTCCAAGGAAC  350

seq1  TTAGGAATTTAGTCTGCTTAGGTGAGAGTCTGTACCACCTGGGAACTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATTTAGTCTGCTTAGGTGAGAGTCTGTACCACCTGGGAACTGCC  400

seq1  AAAGCAACACAGTGTCTGAGAAAGGTCCTGTTTTGGGCCTTCTTCTTCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACACAGTGTCTGAGAAAGGTCCTGTTTTGGGCCTTCTTCTTCGG  450

seq1  CCAGGAGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGA  500

seq1  GCTTGCCAGCAGAGAGTGCTCTG  523
      |||||||||||||||||||||||
seq2  GCTTGCCAGCAGAGAGTGCTCTG  523


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