BAC Information

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BAC

Clone NameB6Ng01-290I23
Chromosome7 (Build37)
Map Location 93,105,992 - 93,107,120
singlet/doubletsinglet
Overlap geneEG546980
Upstream geneF830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928
Downstream geneLOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290I23.bB6Ng01-290I23.g
ACCGA087674GA087675
length1,2151,113
definitionB6Ng01-290I23.b B6Ng01-290I23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctggacccagttttttaatggggttgtttcaat
ttctggagtccagcttcttgagatctttgtatatattggatatttatccc
ctatcagatttaggattggtaaaaatcctttcccaatctgttggtggcct
ttttgtcttattgacagtatcttttgaattacagaagctttgcaatatta
tgaggtctcatttgtcaattcttgatcttacggcacaagccattgctatt
ctgtttaggattttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctataaatttcagtgtctttggttttatgtggaggtctttga
tccacttatatttgagctttgtaaaggagaaaagaatggatcaatttgca
ttcttctgcatgataactgctagttgtgccagcgccacttttttccactg
gatggttttagctcctttgtcaaagatcaagtgaccataggtgtgtgagt
tcatttctgggtctgcaattctattccattgatctacctgtatgttgctg
taccagtaccattcagtttttatcacaaatgctctgtaatagagcttgag
gtaaggcatagtgattcccccagaggttcttttattattgataaaaaatt
tctattcttgtttttttgttatttcagatgaaattgcaaatttccctttc
taactctgaagaattgttggaatttttatggggattgcattgaatctgta
tattactttcagcaagatagccattttgactatgctaatcctcccaatac
atgagcatgggagatctttctatcttctgagatcttctttgatttctttc
ctcagacacttgaagttcttataatacagatctctcactccctagttaga
gtcacaccaaggtattttataatatttgtgattattctgaaggatattgt
ttccctaatatctttctaagcagtttatcctttgggtaaagaaaaggagg
aatgaatatcattgttacagtgaaattattggtgggcttttcataattac
atataagttgttagtttattgtattattgaaataatttggaatgccttca
ctaagcctattatagatgaatattattacatctaatgtcttcccagggag
agatcactagtagcagcaggcatcaggttgaatggcgattgatgcattgt
caggggacatgctga
gaattccatggtcatcatttgtaacgatcactcctatccagttccatctg
aaatgaactactaaggacaccatggctagtggtagaaatgtgtccttgcg
agatatctggtgaagatgaggatattgctcattatcactcaaaggaagat
gaaaatgaccacagtaaagctgaaaaatacagaacattgtcaacaatatg
aacatgatggaatacagagggatacttgtaagatcagagtgtgcttgagc
aaagtgtattgatgctcgaaagtgtttattcttcttctcattattacaat
tgtatccaacctcttgtgattttctaaacaatacaagtatactgagtttt
ctcgtataacgtttcacaatactgctgtctcccatttatgataaagttgt
tttgtttgctacaaaatttatctatgtatttatgcttgattgatcataat
aaatataagccctttatttccctattaaactgccttcatactcagaaaat
ctcactgtgatgagaaaatatttccttaaaattaatccatcttgacttga
cttacctcaggaattctggacatgaacaggtatggcccaatgcttgaaga
tactgcccataacggtgctgtaagtacaattaaatatcttctctcatttt
tgcagtagtaattaggaataagatcttcacttttaaaaagaaaatcagtt
ttctcatcatgtttgtctaggacacactcaatattaactaccagagaaat
gttgggtaaaatatggcagttcttatttatttcttccaaggcaagataaa
cagagaaaatcaaatgcctggtcttgggtgtcaccctgaaaacagagaag
tagagaatataattcctaaacctgtacaagcaagagccagaaaaaaaaat
ccttacatacagagaggaaatcaacacaaaaattggacagttgcatactg
gttttaactgacagaaaacggaatatacataagtttacattatattctat
aaatacctacaagtaaatttctgggttttttttgttgttttgttttttga
tttttgcttttttgaattaaacagccattgaacacaatcatggagctatt
cacaagccttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93105992_93107120
seq2: B6Ng01-290I23.g_63_1175

seq1  GAATTCCATGGTCATCATTTGTAACGATCACTCCTATCCAGTTCCATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTCATCATTTGTAACGATCACTCCTATCCAGTTCCATCTG  50

seq1  AAATGAACTACTAAGGACACCATGGCTAGTGGTAGAAATGTGTCCTTGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACTACTAAGGACACCATGGCTAGTGGTAGAAATGTGTCCTTGCG  100

seq1  AGATATCTGGTGAAGATGAGGATATTGCTCATTATCACTCAAAGGAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTGGTGAAGATGAGGATATTGCTCATTATCACTCAAAGGAAGAT  150

seq1  GAAAATGACCACAGTAAAGCTGAAAAATACAGAACATTGTCAACAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGACCACAGTAAAGCTGAAAAATACAGAACATTGTCAACAATATG  200

seq1  AACATGATGGAATACAGAGGGATACTTGTAAGATCAGAGTGTGCTTGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATGGAATACAGAGGGATACTTGTAAGATCAGAGTGTGCTTGAGC  250

seq1  AAAGTGTATTGATGCTCGAAAGTGTTTATTCTTCTTCTCATTATTACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTATTGATGCTCGAAAGTGTTTATTCTTCTTCTCATTATTACAAT  300

seq1  TGTATCCAACCTCTTGTGATTTTCTAAACAATACAAGTATACTGAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCAACCTCTTGTGATTTTCTAAACAATACAAGTATACTGAGTTTT  350

seq1  CTCGTATAACGTTTCACAATACTGCTGTCTCCCATTTATGATAAAGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTATAACGTTTCACAATACTGCTGTCTCCCATTTATGATAAAGTTGT  400

seq1  TTTGTTTGCTACAAAATTTATCTATGTATTTATGCTTGATTGATCATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGCTACAAAATTTATCTATGTATTTATGCTTGATTGATCATAAT  450

seq1  AAATATAAGCCCTTTATTTCCCTATTAAACTGCCTTCATACTCAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAGCCCTTTATTTCCCTATTAAACTGCCTTCATACTCAGAAAAT  500

seq1  CTCACTGTGATGAGAAAATATTTCCTTAAAATTAATCCATCTTGACTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTGATGAGAAAATATTTCCTTAAAATTAATCCATCTTGACTTGA  550

seq1  CTTACCTCAGGAATTCTGGACATGAACAGGTATGGCCCAATGCTTGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCAGGAATTCTGGACATGAACAGGTATGGCCCAATGCTTGAAGA  600

seq1  TACTGCCCATAACGGTGCTGTAAGTACAATTAAATATCTTCTCTCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCCATAACGGTGCTGTAAGTACAATTAAATATCTTCTCTCATTTT  650

seq1  TGCAGTAGTAATTAGGAATAAGATCTTCACTTTTAAAAAGAAAATCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGTAATTAGGAATAAGATCTTCACTTTTAAAAAGAAAATCAGTT  700

seq1  TTCTCATCATGTTTGTCTAGGACACACTCAATATTAACTACCAGAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCATGTTTGTCTAGGACACACTCAATATTAACTACCAGAGAAAT  750

seq1  GTTGGGTAAAATATGGCAGTTCTTATTTATTTCTTCCAAGGCAAGATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTAAAATATGGCAGTTCTTATTTATTTCTTCCAAGGCAAGATAAA  800

seq1  CAGAGAAAATCAAATGCCTGGTCTTGGGTGTCACCCTGAAAACAGAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAATCAAATGCCTGGTCTTGGGTGTCACCCTGAAAACAGAGAAG  850

seq1  TAGAGAATATAATTCCTAAACCTGTACAAGCAAGAGCCAGAAAAAAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATATAATTCCTAAACCTGTACAAGCAAGAGCCAGAAAAAAAAAT  900

seq1  CCTTACATACAGAGAGGAAATCAACACAAAAATTGGACAGTTGCATACTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACATACAGAGAGGAAATCAACACAAAAATTGGACAGTTGCATACTG  950

seq1  GTTTTAACTGACAGAAAACGGAATATACATAAGTTTACATTATATTCTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAACTGACAGAAAACGGAATATACATAAGTTTACATTATATTCTAT  1000

seq1  AAATACCTACAAAGTAAATTTCTGGTTTTTTTTTTGTTTGTTTTTTGTTT  1050
      |||||||||| |||||||||||||| |||||         ||| ||||||
seq2  AAATACCTAC-AAGTAAATTTCTGGGTTTTT---------TTTGTTGTTT  1040

seq1  TTTTTTGTTTTTTTTGTTTTTTTTTTTTAATTTTATACAGCCAATGAACA  1100
      | |||| |  |||||| ||||||   ||||      ||||||| ||||||
seq2  TGTTTTTTGATTTTTGCTTTTTTGAATTAA------ACAGCCATTGAACA  1084

seq1  CAAATCATGAGGCTA-TCACAAGCCTTCAT  1129
      | |||||||  |||| ||||||||||||||
seq2  C-AATCATGGAGCTATTCACAAGCCTTCAT  1113