BAC Information

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BAC

Clone NameB6Ng01-291F01
Chromosome7 (Build37)
Map Location 89,725,840 - 89,726,886
singlet/doubletsinglet
Overlap geneAdamtsl3
Upstream geneWhdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3
Downstream gene1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291F01.bB6Ng01-291F01.g
ACCGA088235GA088236
length1,056528
definitionB6Ng01-291F01.b B6Ng01-291F01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaccccatggctttctctttattatgttttctgtgcaggttt
tatgtggatattttttcatgttaattaaaatgctaaattctgacttctcc
aaatggtgctaaccaacttgagatagccttatttgagttcataaatgaag
aatttttgcagtatagagaggtgtcttaaagaggtaccccagcaacttcc
tctcaataaaaacagcaacaaacaaaacaaaacagaaacctgttgtttta
agtgtacatgcatttatttagatactatgagaaggagtgtctgtcagcta
catactgtgaggtgaatggctatgagaccactgagcacttttactgggac
tcctatgaaatcccagaaggcagaaagtttgcatgtgtacatggttagga
gaaggtctacaggagttgtgagctcctgcctacctggtctttcccagtac
aacttcaaataagccttgaacatttattctacaattggtaacctgtctct
ggccctaaaagaaaaccgtattttaggaagtatattgttgctgaagtgtc
tgcctgtaccaccttgtgcacccgcaagctttgcttttattaaaaaatag
ctctgctaactgaatttggcttactcttaccttagtgggaagggtcttga
agagccttctctatcctgaaaaacaatcaccaagggcaacaagattgatc
agaatccactgccctaccccacatccctcctcccataaagtgtcagatgg
tcacaatccctggtgttttgggcttgtatcaactcaaccaaggctatatg
tgacagagtctaatctgatctgccatgggattttgcatcttgagaactaa
ggtttttttgtgaaattatcagaggtgttaattttaattttggttatgaa
gctaagacatcttcactttttacacaaattattacaaagtaccttttgaa
tgccccttatcatctaaccgtccgtcttgtccatccatccattatttggc
ctatccatcatcttctggactaagtacctgtagttctgtgtggtggcaat
cctgtg
tgctgaagagagggacgaaagattgtaggagccagagggatcaaggacat
caaaagaaaaaccttcagaatcaactaacctgggctcacaggggcccaaa
gagacaaccaacaacccgtgaacctgtatgggactgacctaggcctaggc
acgcatgttacagctgtgtagcttggagttcttgtgggactccaacagtg
ggagcaggggctgtctctggctcttttgcctacttgtgggacctttttcc
tcctacattactgcctcatccagccttgatagaagggaagtgtctagtcc
tactgcgacttgatatgcaatgtttggttaataacccggggaagatggcc
attgttttaagggaaacgaggaggcatggacagtgggggtaagtggtagg
aagatagggagtacgtggaggctggggcaaaaggatcacatgctcaaggc
ttgccttggctacagaatgagctcaaggctgtcctaggtaactcagtgag
acactgtctcaaaataaactaaaacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89725840_89726886
seq2: B6Ng01-291F01.b_44_1099

seq1  GAATTCCTGACCCCATGGCTTTCTCTTTATTATGTTTTCTGTGCAGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACCCCATGGCTTTCTCTTTATTATGTTTTCTGTGCAGGTTT  50

seq1  TATGTGGATATTTTTTCATGTTAATTAAAATGCTAAATTCTGACTTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGATATTTTTTCATGTTAATTAAAATGCTAAATTCTGACTTCTCC  100

seq1  AAATGGTGCTAACCAACTTGAGATAGCCTTATTTGAGTTCATAAATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGCTAACCAACTTGAGATAGCCTTATTTGAGTTCATAAATGAAG  150

seq1  AATTTTTGCAGTATAGAGAGGTGTCTTAAAGAGGTACCCCAGCAACTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGCAGTATAGAGAGGTGTCTTAAAGAGGTACCCCAGCAACTTCC  200

seq1  TCTCAATAAAAACAGCAACAAACAAAACAAAACAGAAACCTGTTGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATAAAAACAGCAACAAACAAAACAAAACAGAAACCTGTTGTTTTA  250

seq1  AGTGTACATGCATTTATTTAGATACTATGAGAAGGAGTGTCTGTCAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACATGCATTTATTTAGATACTATGAGAAGGAGTGTCTGTCAGCTA  300

seq1  CATACTGTGAGGTGAATGGCTATGAGACCACTGAGCACTTTTACTGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGTGAGGTGAATGGCTATGAGACCACTGAGCACTTTTACTGGGAC  350

seq1  TCCTATGAAATCCCAGAAGGCAGAAAGTTTGCATGTGTACATGGTTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGAAATCCCAGAAGGCAGAAAGTTTGCATGTGTACATGGTTAGGA  400

seq1  GAAGGTCTACAGGAGTTGTGAGCTCCTGCCTACCTGGTCTTTCCCAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTCTACAGGAGTTGTGAGCTCCTGCCTACCTGGTCTTTCCCAGTAC  450

seq1  AACTTCAAATAAGCCTTGAACATTTATTCTACAATTGGTAACCTGTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAAATAAGCCTTGAACATTTATTCTACAATTGGTAACCTGTCTCT  500

seq1  GGCCCTAAAAGAAAACCGTATTTTAGGAAGTATATTGTTGCTGAAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTAAAAGAAAACCGTATTTTAGGAAGTATATTGTTGCTGAAGTGTC  550

seq1  TGCCTGTACCACCTTGTGCACCCGCAAGCTTTGCTTTTATTAAAAAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTACCACCTTGTGCACCCGCAAGCTTTGCTTTTATTAAAAAATAG  600

seq1  CTCTGCTAACTGAATTTGGCTTACTCTTACCTTAGTGGGAAGGGTCTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTAACTGAATTTGGCTTACTCTTACCTTAGTGGGAAGGGTCTTGA  650

seq1  AGAGCCTTCTCTATCCTGAAAAACAATCACCAAGGGCAACAAGATTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTCTCTATCCTGAAAAACAATCACCAAGGGCAACAAGATTGATC  700

seq1  AGAATCCACTGCCCTACCCCACATCCCTCCTCCCATAAAGTGTCAGATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCACTGCCCTACCCCACATCCCTCCTCCCATAAAGTGTCAGATGG  750

seq1  TCACAATCCCTGGTGTTTTGGGCTTGTATCAACTCAACCAAGGCTATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATCCCTGGTGTTTTGGGCTTGTATCAACTCAACCAAGGCTATATG  800

seq1  TGACAGAGTCTAATCTGATCTGCCATGGGATTTTGCATCTTGAGAACTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAGTCTAATCTGATCTGCCATGGGATTTTGCATCTTGAGAACTAA  850

seq1  GGTTTTTTTGTGAAATTATCAGAGGTGTTAATTTTAATTTTGGTTATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTGTGAAATTATCAGAGGTGTTAATTTTAATTTTGGTTATGAA  900

seq1  GCTAAGACATCTTCACTTTTTACAC-AATTATTACAAAGTACC-TTTGAA  948
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  GCTAAGACATCTTCACTTTTTACACAAATTATTACAAAGTACCTTTTGAA  950

seq1  TG-CCCTTATCATCTAACCGTCCGTC-TGTCCATCCATCCGTTATTT-GC  995
      || ||||||||||||||||||||||| ||||||||||||| |||||| ||
seq2  TGCCCCTTATCATCTAACCGTCCGTCTTGTCCATCCATCCATTATTTGGC  1000

seq1  CTATCCATCATC-TCTGGACTAAGTACCTGTAGTTCTGTGTG--TGCAAT  1042
      |||||||||||| |||||||||||||||||||||||||||||   |||||
seq2  CTATCCATCATCTTCTGGACTAAGTACCTGTAGTTCTGTGTGGTGGCAAT  1050

seq1  -CTGTG  1047
       |||||
seq2  CCTGTG  1056