BAC Information

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BAC

Clone NameB6Ng01-291M20
Chromosome7 (Build37)
Map Location 128,171,039 - 128,355,659
singlet/doubletdoublet
Overlap geneMettl9, LOC668456, Igsf6, Otoa
Upstream geneDnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548
Downstream geneLOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291M20.bB6Ng01-291M20.g
ACCGA088597GA088598
length1,144566
definitionB6Ng01-291M20.b B6Ng01-291M20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,171,039 - 128,172,190)(128,355,088 - 128,355,659)
sequence
gaattcctgtgcttgttaaagttctagtcccccagtccatgggcctggca
tgctactggctgctgtgctcaacaaatattactgagtgtgtggaaatttc
ctttctttgtaccttctactgatattgctagtgtaaactgaggtagtatc
agattgtcatttggggtggggagctgtaccagtttaaaatgttctggaag
taggtgagccatcatccctgctacagaggcaagaaagataaatgaggtgg
gaaagttatacaagccagagagcaggagacttcctccctgaagagacaag
caccttggagaagtggataacttgagtttgctgcctggatttgtgatgct
gtttgaatgttttctggttttgaattttgttttttttaccccctggcctc
atcttcatccctttaggacaagatatcataagattagatattacaatatt
ttgattattgggaggcaatgtttgttctgagtcatggtcttccactcatc
atggcaaagaaggcatggtggcatcgcatgaggcagtgactgactgttca
cagtgtggctgaccaggaaacagagaactggacctaaatcagggctgggc
tctaaccttcagagactgcctctgattatacttttgccagacaggcccca
tctctcagaggctctatagtcatcatcccccctatccccaaatccctacc
acagagagcatcatcaactggagagcaagcattcaaacaccggcacagct
atgggagcatcccagacttcattataggtcttaggaaaataattcctcaa
gagacagagaccacattatgattgtcataattccatgagtattattttta
cagccaataaggatttcagagcatctggttatcacagatgattgtaaaat
ttagtcagctacaggcaagggaagggcatctgagagaggctgatgcatcc
aagctaagaccattagcaggcagtcttttcatgtgtgaaatgtatcataa
gccctttcatatttgaaagaagacgaccagggaagaccaagtgaattggc
ctcaaatcatcaggcaggagtaccacccctggcttccacgtcagtaagtg
tctcagggcccaatggcgatgagcagccttggaatctccagtga
atgcccagtaggcaactgtgcttacctctggagatggcctgtggtctttt
atggggagccagagagtaaatatttaggccctgcaggctgtgcgtctccg
tcttgtctaatcagcaattccatctgagtgtagatgcagccacagatgat
gtgcaaatgagtgatctgtgttccaataaaactttattcaaagcatatgg
cgagccatattggccctgccagagttaccagctcctaattagagaaccaa
gatgggaggtgtagggctaagcgccttaatatttcattttttaggtttta
ttcattttttgaaatcttcacacatgtatacaatttatcttgatcattgc
catctctcaacggcccccagctcccccacgaccccccccataatccccca
cacaacatccccctcccaacttcatcccctccatttgtttgtttgtttgt
ttgttttaagccactgaagctaattactggcaagtgcacatgggcttggg
gttgtctgcttgggaatgaggaagacttttataaaaaggacgagggcatt
tattcatgaccctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128171039_128172190
seq2: B6Ng01-291M20.b_51_1194

seq1  GAATTCCTGTGCTTGTTAAAGTTCTAGTCCCCCAGTCCA-GGGCCTGGCA  49
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAATTCCTGTGCTTGTTAAAGTTCTAGTCCCCCAGTCCATGGGCCTGGCA  50

seq1  TGCTACTGGCTGCTGTGCTCAACAAATATTACTGAGTGTGTGGAAATTTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGGCTGCTGTGCTCAACAAATATTACTGAGTGTGTGGAAATTTC  100

seq1  CTTTCTTTGTACCTTCTACTGATATTGCTAGTGTAAACTGAGGTAGTATC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTGTACCTTCTACTGATATTGCTAGTGTAAACTGAGGTAGTATC  150

seq1  AGATTGTCATTTGGGGTGGGGAGCTGTACCAGTTTAAAATGTTCTGGAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTCATTTGGGGTGGGGAGCTGTACCAGTTTAAAATGTTCTGGAAG  200

seq1  TAGGTGAGCCATCATCCCTGCTACAGAGGCAAGAAAGATAAATGAGGTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGCCATCATCCCTGCTACAGAGGCAAGAAAGATAAATGAGGTGG  250

seq1  GAAAGTTATACAAGCCAGAGAGCAGGAGACTTCCTCCCTGAAGAGACAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTATACAAGCCAGAGAGCAGGAGACTTCCTCCCTGAAGAGACAAG  300

seq1  CACCTTGGAGAAGTGGATAACTTGAGTTTGCTGCCTGGATTTGTGATGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGGAGAAGTGGATAACTTGAGTTTGCTGCCTGGATTTGTGATGCT  350

seq1  GTTTGAATGTTTTCTGGTTTTGAATTTTGTTTTTTTTACCCCCTGGCCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAATGTTTTCTGGTTTTGAATTTTGTTTTTTTTACCCCCTGGCCTC  400

seq1  ATCTTCATCCCTTTAGGACAAGATATCATAAGATTAGATATTACAATATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATCCCTTTAGGACAAGATATCATAAGATTAGATATTACAATATT  450

seq1  TTGATTATTGGGAGGCAATGTTTGTTCTGAGTCATGGTCTTCCACTCATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATTGGGAGGCAATGTTTGTTCTGAGTCATGGTCTTCCACTCATC  500

seq1  ATGGCAAAGAAGGCATGGTGGCATCGCATGAGGCAGTGACTGACTGTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAAGAAGGCATGGTGGCATCGCATGAGGCAGTGACTGACTGTTCA  550

seq1  CAGTGTGGCTGACCAGGAAACAGAGAACTGGACCTAAATCAGGGCTGGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGCTGACCAGGAAACAGAGAACTGGACCTAAATCAGGGCTGGGC  600

seq1  TCTAACCTTCAGAGACTGCCTCTGATTATACTTTTGCCAGACAGGCCCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCTTCAGAGACTGCCTCTGATTATACTTTTGCCAGACAGGCCCCA  650

seq1  TCTCTCAGAGGCTCTATAGTCATCATCCCCCCTATCCCCAAATCCCTACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGAGGCTCTATAGTCATCATCCCCCCTATCCCCAAATCCCTACC  700

seq1  ACAGAGAGCATCATCAACTGGAGAGCAAGCATTCAAACACCGGCACAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGCATCATCAACTGGAGAGCAAGCATTCAAACACCGGCACAGCT  750

seq1  ATGGGAGCATCCCAGACTTCATTATAGGTCTTAGGAAAATAATTCCTCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGCATCCCAGACTTCATTATAGGTCTTAGGAAAATAATTCCTCAA  800

seq1  GAGACAGAGACCACATTAGGATTGTCATAATTCCATGAGTATTA-TTTTA  848
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  GAGACAGAGACCACATTATGATTGTCATAATTCCATGAGTATTATTTTTA  850

seq1  CAGCCAATAAGGATTTCAGAGCATCTGGTTATCACAGATGAATTGTAAAA  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGCCAATAAGGATTTCAGAGCATCTGGTTATCACAGATG-ATTGTAAAA  899

seq1  -TTAGTCAGCTACAGGCAAGGGAAGGGCATCTGAGAGAAGGCTGATGCAT  947
       |||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTAGTCAGCTACAGGCAAGGGAAGGGCATCTGAGAG-AGGCTGATGCAT  948

seq1  CCAAGCTAAAGACAATAGCAGGGCCAGTTCTTTTCATGTGTTGAAATGTT  997
      |||||||||   || |||||||  ||| |||||||||||| ||||||| |
seq2  CCAAGCTAAGACCATTAGCAGG--CAG-TCTTTTCATGTG-TGAAATG-T  993

seq1  ATCATAAG-CCTTTCATATTTGAAAG-AGACAGACAAGGGAAGACCAAGT  1045
      |||||||| ||||||||||||||||| |||| ||| ||||||||||||||
seq2  ATCATAAGCCCTTTCATATTTGAAAGAAGAC-GACCAGGGAAGACCAAGT  1042

seq1  G-ATTTGCCTCAAATCACACAAGCAAGAAGACACACCCTGGCTTCCACGT  1094
      | ||| |||||||||||  || ||| ||  ||   |||||||||||||||
seq2  GAATTGGCCTCAAATCA-TCAGGCAGGAGTACCACCCCTGGCTTCCACGT  1091

seq1  CATGTAGTGTCTCAGGGGCCCAATGCCAGAGTGAGCAGGCCTGGGAAATC  1144
      ||   ||||||||| |||||||||| | || ||||||| | |||  ||||
seq2  CAGTAAGTGTCTCA-GGGCCCAATGGC-GA-TGAGCAGCCTTGG--AATC  1136

seq1  TCCAGTGA  1152
      ||||||||
seq2  TCCAGTGA  1144

seq1: chr7_128355088_128355659
seq2: B6Ng01-291M20.g_71_642 (reverse)

seq1  TGCAGGGTCATGAATAAATGCCCTCGTCCTTTTTATAAAAGTCTTCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGTCATGAATAAATGCCCTCGTCCTTTTTATAAAAGTCTTCCTCA  50

seq1  TTCCCAAGCAGACAACCCCAAGCCCATGTGCACTTGCCAGTAATTAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAGCAGACAACCCCAAGCCCATGTGCACTTGCCAGTAATTAGCTT  100

seq1  CAGTGGCTTAAAACAAACAAACAAACAAACAAATGGAGGGGATGAAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTTAAAACAAACAAACAAACAAACAAATGGAGGGGATGAAGTTG  150

seq1  GGAGGGGGATGTTGTGTGGGGGATTATGGGGGGGGTCGTGGGGGAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGATGTTGTGTGGGGGATTATGGGGGGGGTCGTGGGGGAGCTGG  200

seq1  GGGCCGTTGAGAGATGGCAATGATCAAGATAAATTGTATACATGTGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGTTGAGAGATGGCAATGATCAAGATAAATTGTATACATGTGTGAA  250

seq1  GATTTCAAAAAATGAATAAAACCTAAAAAATGAAATATTAAGGCGCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAAAAAATGAATAAAACCTAAAAAATGAAATATTAAGGCGCTTAG  300

seq1  CCCTACACCTCCCATCTTGGTTCTCTAATTAGGAGCTGGTAACTCTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACACCTCCCATCTTGGTTCTCTAATTAGGAGCTGGTAACTCTGGCA  350

seq1  GGGCCAATATGGCTCGCCATATGCTTTGAATAAAGTTTTATTGGAACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAATATGGCTCGCCATATGCTTTGAATAAAGTTTTATTGGAACACA  400

seq1  GATCACTCATTTGCACATCATCTGTGGCTGCATCTACACTCAGATGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTCATTTGCACATCATCTGTGGCTGCATCTACACTCAGATGGAAT  450

seq1  TGCTGATTAGACAAGACGGAGACGCACAGCCTGCAGGGCCTAAATATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATTAGACAAGACGGAGACGCACAGCCTGCAGGGCCTAAATATTTA  500

seq1  CTCTCTGGCTCCCCATAAAAGACCACAGGCCATCTCCAGAGGTAAGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGCTCCCCATAAAAGACCACAGGCCATCTCCAGAGGTAAGCACA  550

seq1  GTTGCCTACTGGGCATGAATTC  572
      ||||||||||||||||||||||
seq2  GTTGCCTACTGGGCATGAATTC  572