BAC Information

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BAC

Clone NameB6Ng01-291N18
Chromosome7 (Build37)
Map Location 15,524,008 - 15,524,396
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312, LOC666365
Downstream geneLOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx, Crxos1, Sepw1, Gltscr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291N18.bB6Ng01-291N18.g
ACCGA088640GA088641
length4971,181
definitionB6Ng01-291N18.b B6Ng01-291N18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgaagtctgtaacttcttccttccttcatgcctgccttctct
ttccttccttccttccttccttccttccttacatacatccttccttcctt
ccttcctgcctgcctgcctgactgcctgcctgcctgcctgcctgcctgcc
tgccttcctgcctgccttcctgcctgcctgcctgcctgcctgcctgccag
cctgcctgcctgcctgcctgcctgccatcctgcctgcctgccttcctgcc
ttcctgccttccagcctgcctgcctgcctgcctgcctacctgccttcctg
cctgcctgcctgcctgcctgcctgtctgccttcctgccttcttgcctgcc
tgcctgcctaccttcctgcctttctgccttcttgcctgcctgcctgcctg
cctgcctgcctgccttccagccttcctgccttcctgccatcctgccttcc
tgacttcctgacttcctgacttactgacttcctgacttcctcccttc
gaattctcacctgcggaataccgaatggaagagaagcacgtgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccactgttggtg
ggattgcaagcttgtacaacccctctggaaatcagtctggcggttcctta
gaaaactggacatagtagtatcagaggatccagcaatacctctcctgggc
atatatcaagaaaatgtcccaactggtatgaaggacacatgctccactat
gttcatagcagccttatttataatagccagaatctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttatacaatg
gagtactactcagctattaaaaacaatgaatttaggaaattcctaagcaa
atagatggacctggagggcatcatgctgagtgaggtaactcaatcacaaa
ggaaatcacacaacacgtactcactgataagtggatattagcccaaaact
taggatacccaagatataagatacaatttgctaaacgcatgaaactctag
aagaatgaagaccaaactgtggacactgtgccccttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgtgacaa
aaggatggaccttctagagactgccatatccaggtatccaaaccataatc
agcttccaaaccctgacaccattgcatacagtatcaagattttgctgaaa
gtacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acaaaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggaactagagaaagtaccaaaggagctaatgggatcttgcaaccc
ttataggtggaacacattatgaactaaccagtaccaccggagctctgact
ctagcctacatatgtatcaaaagatgctagtcagcatcactgtaaagagg
agtcaatgaccacaaactttatattgccctcagtcggaactccagacaaa
aatggtattaggtgctagggaattggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15524008_15524396
seq2: B6Ng01-291N18.b_47_543

seq1  GAATTCTTTGAAGTCTGTAACTTCTTCCTTCCTTCATGCCTGCCTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGTCTGTAACTTCTTCCTTCCTTCATGCCTGCCTTCTCT  50

seq1  TTCCTTCCTTCCTTCCTTCAT----------------TCCTTCCTTCCTG  84
      ||||||||||||||||||| |                |||||||||||| 
seq2  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTACATACATCCTTCCTTCCTT  100

seq1  CCTTCCTGCCTGCCTGC----CTGCCTGCCTGCCTGCCTGCCTGCCTTCC  130
      |||||||||||||||||    |||||||||||||||||||||||||| ||
seq2  CCTTCCTGCCTGCCTGCCTGACTGCCTGCCTGCCTGCCTGCCTGCCTGCC  150

seq1  TGCCTT----CCTGCCTTCCTGCCTTCCTGCCTGCCTTCCTCCCTG----  172
      ||||||    ||||||||||||||| ||||||||||| ||| ||||    
seq2  TGCCTTCCTGCCTGCCTTCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCAG  200

seq1  ----------------------------CCTGCCTGCCTGCCTTCCTGCC  194
                                  ||||||||||||||||||||||
seq2  CCTGCCTGCCTGCCTGCCTGCCTGCCATCCTGCCTGCCTGCCTTCCTGCC  250

seq1  TTCCTGCCTT--------CATGCCTGCCTGCCTGCCTTCCTGCCTT----  232
      ||||||||||        | ||||||||||||||||| ||||||||    
seq2  TTCCTGCCTTCCAGCCTGCCTGCCTGCCTGCCTGCCTACCTGCCTTCCTG  300

seq1  ------------CCTGCCTGCCTGTCTGCCTTCCTGCCTTCTTGCCTGCC  270
                  ||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCCTGCCTGCCTGCCTGTCTGCCTTCCTGCCTTCTTGCCTGCC  350

seq1  TGCCTGTCTGCTTTCCTGCCTTCCTGACTTCTTGCCTGCCTGCCTGCCTT  320
      |||||| || | |||||||||| ||| |||||||||||||||||||||| 
seq2  TGCCTGCCTACCTTCCTGCCTTTCTGCCTTCTTGCCTGCCTGCCTGCCTG  400

seq1  CCTGCCTGCCTGCGT----GCCTTCCTGCCTTCCTGCCTTCCTGACTTCC  366
      ||||||||||||| |    ||||||||||||||||||| ||||| |||||
seq2  CCTGCCTGCCTGCCTTCCAGCCTTCCTGCCTTCCTGCCATCCTGCCTTCC  450

seq1  TGCCTTCCTGCCTTCCCCCCTTC------------------------  389
      || ||||||| |||||   |||                         
seq2  TGACTTCCTGACTTCCTGACTTACTGACTTCCTGACTTCCTCCCTTC  497