BAC Information

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BAC

Clone NameB6Ng01-291O03
Chromosome7 (Build37)
Map Location 59,314,308 - 59,429,125
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291O03.bB6Ng01-291O03.g
ACCGA088658GA088659
length1,190440
definitionB6Ng01-291O03.b B6Ng01-291O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,314,308 - 59,315,490)(59,428,680 - 59,429,125)
sequence
gaattctagaaagtcttcaatgtacaaaggagactctgactgaaaaagaa
tattcttatgtaccacagccctctaactttgagtgaagatgattgcagat
atcctttgatggatgttagagctgtgtgtgacacacccccttgcaggcat
ttatgtggagggagatgctttttgtcactgtttttctgctggatagcctt
taaaataagaaacaaacaagggcctgtgcactgaattctcctggcttgtc
ctgtggctgacatcaataacataccatgtaggagagcagctgtaacttca
gaaatagacattcttgttcagtagtaaagacaaattagttaaactgatac
ttcttttcccccttaaagctgtcatggatgcaggcggttctccatgcagc
actctgcatttgcagtaaccctgagtgtccgatttgcttctctttgtatc
ccaattcatggctactcccagttaagcccagtagttatagccactgtaca
taaagttaagaatgcctttataatagtaaataagtcagagcacatctaag
tttatataaatgaaggtacagaaatgtacataagctggttgtggtagctt
ctcactggcagcagagcaatgaaagctgtaattatgaacagtatattttg
taaaagttaatcttttatacaaattaaaaactcacctttattgatatttt
gtgtggttttgaggctaagttatatactatttatactatttgaattttat
tagtttgattatctaaagcacatgggtttttaaagcttttgatacgttgt
cttagcttttactttaccctcaaacacaaaacttcccacctcagcctacc
aaatacgacaggtatgtgtcaccatagctcgctgaaacaagtacatttgt
gctatatttgcttttattttcaatttttattacatgctgatgtatctctg
tcagtgtatcagtatgtgcacataagtgtgcatgcctgccaagtaactga
atacaagtcctctggaagagcaacaccatgttcttgggcccctgagcatc
tccttcagtatggtgctttcctcttcagaaaaattccacttcttcaggtg
atagagtaagccagccctttctatagtacattcaaaaacgataactcagt
caccctcacttgcaattactctcttcatcttgatataaat

ctcagcagaggtagtattgggaaagcaatgaatcatcgtgcttgttttgt
aataaattggtgttccctggatgatgtcttacagtgaatagaaaactcta
gttttaggattttgtctctattttctttcattcattgctctgaatagatt
taatttgttgcatgatgttggtccctactcatttcccttgtgagatcctc
tgtccaataagttgttgtgcaagaaaggaatccagacagagagtgtgtgt
gagagagatggggatggatgcatacaggggcaagaggatgagaaggagtt
gaaaaaggagacagaagcaaaggaagaggagcaggaggaagaggaaaaag
agacagagggaaggagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagagaggggggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59314308_59315490
seq2: B6Ng01-291O03.b_47_1236

seq1  GAATTCTAGAAAGTCTTCAATGTACAAAGGAGACTCTGACTGAAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAAGTCTTCAATGTACAAAGGAGACTCTGACTGAAAAAGAA  50

seq1  TATTCTTATGTACCACAGCCCTCTAACTTTGAGTGAAGATGATTGCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTATGTACCACAGCCCTCTAACTTTGAGTGAAGATGATTGCAGAT  100

seq1  ATCCTTTGATGGATGTTAGAGCTGTGTGTGACACACCCCCTTGCAGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGATGGATGTTAGAGCTGTGTGTGACACACCCCCTTGCAGGCAT  150

seq1  TTATGTGGAGGGAGATGCTTTTTGTCACTGTTTTTCTGCTGGATAGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGAGGGAGATGCTTTTTGTCACTGTTTTTCTGCTGGATAGCCTT  200

seq1  TAAAATAAGAAACAAACAAGGGCCTGTGCACTGAATTCTCCTGGCTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGAAACAAACAAGGGCCTGTGCACTGAATTCTCCTGGCTTGTC  250

seq1  CTGTGGCTGACATCAATAACATACCATGTAGGAGAGCAGCTGTAACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTGACATCAATAACATACCATGTAGGAGAGCAGCTGTAACTTCA  300

seq1  GAAATAGACATTCTTGTTCAGTAGTAAAGACAAATTAGTTAAACTGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGACATTCTTGTTCAGTAGTAAAGACAAATTAGTTAAACTGATAC  350

seq1  TTCTTTTCCCCCTTAAAGCTGTCATGGATGCAGGCGGTTCTCCATGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCCCCTTAAAGCTGTCATGGATGCAGGCGGTTCTCCATGCAGC  400

seq1  ACTCTGCATTTGCAGTAACCCTGAGTGTCCGATTTGCTTCTCTTTGTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCATTTGCAGTAACCCTGAGTGTCCGATTTGCTTCTCTTTGTATC  450

seq1  CCAATTCATGGCTACTCCCAGTTAAGCCCAGTAGTTATAGCCACTGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCATGGCTACTCCCAGTTAAGCCCAGTAGTTATAGCCACTGTACA  500

seq1  TAAAGTTAAGAATGCCTTTATAATAGTAAATAAGTCAGAGCACATCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAAGAATGCCTTTATAATAGTAAATAAGTCAGAGCACATCTAAG  550

seq1  TTTATATAAATGAAGGTACAGAAATGTACATAAGCTGGTTGTGGTAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAAATGAAGGTACAGAAATGTACATAAGCTGGTTGTGGTAGCTT  600

seq1  CTCACTGGCAGCAGAGCAATGAAAGCTGTAATTATGAACAGTATATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGCAGCAGAGCAATGAAAGCTGTAATTATGAACAGTATATTTTG  650

seq1  TAAAAGTTAATCTTTTATACAAATTAAAAACTCACCTTTATTGATATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTAATCTTTTATACAAATTAAAAACTCACCTTTATTGATATTTT  700

seq1  GTGTGGTTTTGAGGCTAAGTTATATACTATTTATACTATTTGAATTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTTTTGAGGCTAAGTTATATACTATTTATACTATTTGAATTTTAT  750

seq1  TAGTTTGATTATCTAAAGCACATGGGTTTTTAAAGCTTTTGATACGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGATTATCTAAAGCACATGGGTTTTTAAAGCTTTTGATACGTTGT  800

seq1  CTTAGCTTTTACTTTACCCTCAAACACAAAACTTCCCACCTCAGCCTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTTTTACTTTACCCTCAAACACAAAACTTCCCACCTCAGCCTACC  850

seq1  AAATACGACAGGTATGTGTCACCATAGCTCGCTGAAACAAGTACATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACGACAGGTATGTGTCACCATAGCTCGCTGAAACAAGTACATTTGT  900

seq1  GCTATATTTGCTTTTATTTTCAATTTTTATTACATGCTGATGTATCTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTTGCTTTTATTTTCAATTTTTATTACATGCTGATGTATCTCTG  950

seq1  TCAGTGTATCAGTATGTGCACATAAGTGTGCATGCCTGCCAAGTAACTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTATCAGTATGTGCACATAAGTGTGCATGCCTGCCAAGTAACTGA  1000

seq1  ATACAAGTCCTCTGGAAGAGCAACA-CATGTTCTT-GGCCCCTGAGCCAT  1048
      ||||||||||||||||||||||||| ||||||||| |||||||||| |||
seq2  ATACAAGTCCTCTGGAAGAGCAACACCATGTTCTTGGGCCCCTGAG-CAT  1049

seq1  CT-CTCCAGTAT-GTGC-TTCCTCTTCAGAAAAATCCCAC-TCTTCAGTG  1094
      || || |||||| |||| ||||||||||||||||| |||| |||||||  
seq2  CTCCTTCAGTATGGTGCTTTCCTCTTCAGAAAAATTCCACTTCTTCAGGT  1099

seq1  AATAGAGT-AGCCAGCCC-TTCTATAGTACATTTCAAAAACGATGACATC  1142
       ||||||| ||||||||| |||||||||||| |||||||||||| || ||
seq2  GATAGAGTAAGCCAGCCCTTTCTATAGTACA-TTCAAAAACGATAAC-TC  1147

seq1  AGTCA-CCTCAC-TGCATATACTCTCTCCATCTTGATATAAAT  1183
      ||||| |||||| ||||  |||||||| |||||||||||||||
seq2  AGTCACCCTCACTTGCAATTACTCTCTTCATCTTGATATAAAT  1190


seq1: chr7_59428680_59429125
seq2: B6Ng01-291O03.g_66_511 (reverse)

seq1  TCCCTCCCTCCCCCCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCCCCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  50

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTCCTTCCCTCTGTCTCTTTTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTCCTTCCCTCTGTCTCTTTTTCCTC  100

seq1  TTCCTCCTGCTCCTCTTCCTTTGCTTCTGTCTCCTTTTTCAACTCCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTGCTCCTCTTCCTTTGCTTCTGTCTCCTTTTTCAACTCCTTCT  150

seq1  CATCCTCTTGCCCCTGTATGCATCCATCCCCATCTCTCTCACACACACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTTGCCCCTGTATGCATCCATCCCCATCTCTCTCACACACACTC  200

seq1  TCTGTCTGGATTCCTTTCTTGCACAACAACTTATTGGACAGAGGATCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGGATTCCTTTCTTGCACAACAACTTATTGGACAGAGGATCTCA  250

seq1  CAAGGGAAATGAGTAGGGACCAACATCATGCAACAAATTAAATCTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAATGAGTAGGGACCAACATCATGCAACAAATTAAATCTATTCA  300

seq1  GAGCAATGAATGAAAGAAAATAGAGACAAAATCCTAAAACTAGAGTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGAATGAAAGAAAATAGAGACAAAATCCTAAAACTAGAGTTTTC  350

seq1  TATTCACTGTAAGACATCATCCAGGGAACACCAATTTATTACAAAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTGTAAGACATCATCCAGGGAACACCAATTTATTACAAAACAAG  400

seq1  CACGATGATTCATTGCTTTCCCAATACTACCTCTGCTGAGGAATTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATGATTCATTGCTTTCCCAATACTACCTCTGCTGAGGAATTC  446


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