BAC Information

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BAC

Clone NameB6Ng01-292A13
Chromosome7 (Build37)
Map Location 120,699,941 - 120,788,017
singlet/doubletdoublet
Overlap geneMlstd2
Upstream geneParva, LOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736
Downstream geneEG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292A13.bB6Ng01-292A13.g
ACCGA088774GA088775
length716580
definitionB6Ng01-292A13.b B6Ng01-292A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,699,941 - 120,700,653)(120,787,438 - 120,788,017)
sequence
gaattcacattcttctgcctgaacaatgcagttaatttttttcttcttta
acccctatgggatcagctggatgtcagggttttaccatttaaacctgatc
cagtcacagaaatggttgtttattgcagatgatactcctcatatgaaaga
aaacctatgaaacaaaacaagttagcagctgcccatatattctacatata
ttgagagaagtataagacagtgtattaaacatgagaaaaatggaaggcac
acagcagacactgttctatacagtttcaattgaagtccaggtatatgttg
acagctgggtcaactcctactctctgagtattctccaacaaccccccccc
cccccgtaagactgaacagattactaattctacttcctgcccataaaaag
ttagattccaggaaaagggtcagaaaacctttcttataaagggccatgtt
gtaaacatttagaccttgtaagcgcatagttctgttgttacctctctgcc
ttggtgttaaagaaagaaagcagtcatagacagtttataaataatgaaca
tgattgctttaataaaactttattcacaagatagtaatagagtgtactgg
ctgtgtgggcttttgtttgctgacttatgttacagagacatttttattgg
tatacattccctttcttatttaaaattcgtgtggcttttaaaaaaatttc
cactgagttattctta
gaattcacaccgggcaaggacctgaaggcaggagctgagggtaggactgt
aggagctctcattactagcttccctcccctcgcttcgggccctcccccac
ttctttggtttttggagacagattttctcgttgtaacccctgcggctcat
tctatagaccaatctggcctcaaactcacagcaggctgcctggtctctgc
atcctgactgctggaattaacagtgtgccccaccactccctgctctttag
aaaaatatttatttatgtgtgcataagtgctctatttggatgtgtcccag
catcataaatgaagcgatctcacttccctacatatggttgcgaatcccta
tgtagttgctgaatttgaactcatgacctctggaagagcagcctgggctc
ttacccactgagccttctctccttcacctctcagtgtgtgtccttataca
accctggaccacctgccctctacggcaatgctcataaggctggtcccact
cacatcaatccactaagcaagaaaataccctataggcatatctaatacaa
acttttctcttatgtgaattaatccctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120699941_120700653
seq2: B6Ng01-292A13.b_43_758

seq1  GAATTCACATTCTTCTGCCTGAACAATGCAGTTAATTTTTTTCTTCTACA  50
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  GAATTCACATTCTTCTGCCTGAACAATGCAGTTAATTTTTTTCTTCT-TT  49

seq1  AACCCCTATGGTATCAGCTGGATGTCAGGGTTTTACCATTTAAACCTGAT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTATGGGATCAGCTGGATGTCAGGGTTTTACCATTTAAACCTGAT  99

seq1  CCAGTCACAGAAATGGTTGTTTATTGCAGATGATACTCCTCATATGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCACAGAAATGGTTGTTTATTGCAGATGATACTCCTCATATGAAAG  149

seq1  AAAACCTATGAAACAAAACAAGTTAGCAGCTGCCCATATATTCTACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTATGAAACAAAACAAGTTAGCAGCTGCCCATATATTCTACATAT  199

seq1  ATTGAGAGAAGTATAAGACAGTGTATTAAACATGAGAAAAATGGAAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGAAGTATAAGACAGTGTATTAAACATGAGAAAAATGGAAGGCA  249

seq1  CACAGCAGACACTGTTCTATACAGTTTCAATTGAAGTCCAGGTATATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGACACTGTTCTATACAGTTTCAATTGAAGTCCAGGTATATGTT  299

seq1  GACAGCTGGGTCAACTCCTACTCTCTGAGTATTCTCCAACAACCCCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGGGTCAACTCCTACTCTCTGAGTATTCTCCAACAACCCCCCCC  349

seq1  CCCCCCGTAAGACTGAACAGATTACTAATTCTACTTCCTGCCCATAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCGTAAGACTGAACAGATTACTAATTCTACTTCCTGCCCATAAAAA  399

seq1  GTTAGATTCCAGGAAAAGGGTCAGAAAACCTTTCTTATAAAGGGCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATTCCAGGAAAAGGGTCAGAAAACCTTTCTTATAAAGGGCCATGT  449

seq1  TGTAAACATTTAGACCTTGTAAGCGCATAGTTCTGTTGTTACCTCTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATTTAGACCTTGTAAGCGCATAGTTCTGTTGTTACCTCTCTGC  499

seq1  CTTGGTGTTAAAGAAAGAAAGCAGTCATAGACAGTTTATAAATAATGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTTAAAGAAAGAAAGCAGTCATAGACAGTTTATAAATAATGAAC  549

seq1  ATGATTGCTTTAATAAAACTTTATTCACAAGATAGTAATAGAGTGTACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGCTTTAATAAAACTTTATTCACAAGATAGTAATAGAGTGTACTG  599

seq1  GCTGTGTGGGCTTTTGTTTGCTGACTTATGTTACAGAGACATTTTTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGGGCTTTTGTTTGCTGACTTATGTTACAGAGACATTTTTATTG  649

seq1  GTATACTTTCCC-TTCTTATTT-AAATTCGTGTGGCTTTT-AAAAAGTTT  697
      |||||| ||||| ||||||||| ||||||||||||||||| ||||| |||
seq2  GTATACATTCCCTTTCTTATTTAAAATTCGTGTGGCTTTTAAAAAAATTT  699

seq1  CCACTGAG-TATTCTAA  713
      |||||||| |||||| |
seq2  CCACTGAGTTATTCTTA  716

seq1: chr7_120787438_120788017
seq2: B6Ng01-292A13.g_65_644 (reverse)

seq1  CAGAGGGATTAATTCAGTTAAGAGAAATGTTTCTATTAGATAGGCCTATA  50
      ||||||||||||||||  ||||||||| |||| ||||||||| |||||||
seq2  CAGAGGGATTAATTCACATAAGAGAAAAGTTTGTATTAGATATGCCTATA  50

seq1  GGGAATTTTCTTGCTTAGT-GATTGATGTGAGTGGGACCAGCCTTCTGAG  99
      ||| ||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  GGGTATTTTCTTGCTTAGTGGATTGATGTGAGTGGGACCAGCCTTATGAG  100

seq1  CATTGCCGTCCTGGGCAGGTGGTCCAGGGTTGTATAAGGACACACACTGA  149
      |||||||||   ||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCGTAGAGGGCAGGTGGTCCAGGGTTGTATAAGGACACACACTGA  150

seq1  GAGGTGCTGGAGAGATGGCTCAGTGGGTAAGAGCACTGGCTGCTCTTCCA  199
      ||||||  ||||||| |||||||||||||||||| | |||||||||||||
seq2  GAGGTGAAGGAGAGAAGGCTCAGTGGGTAAGAGCCCAGGCTGCTCTTCCA  200

seq1  GAGGTCCTGAGTTCACTTCTAGCAACTACATAGCGACTCACAACCATCTG  249
      |||||| ||||||||  |  ||||||||||||| || || ||||||| ||
seq2  GAGGTCATGAGTTCAAATTCAGCAACTACATAGGGATTCGCAACCATATG  250

seq1  TAGTGAAGTCTGATGGCTTCATTTATGATGCTGGGATACATGCAAATAGA  299
      ||| |||||  ||| ||||||||||||||||||||| |||| ||||||||
seq2  TAGGGAAGTGAGATCGCTTCATTTATGATGCTGGGACACATCCAAATAGA  300

seq1  GCACTTATGCACACATAAATAAATCTTTTTCTAAAGAGCAGGTTGTGGTG  349
      |||||||||||||||||||||||| |||||||||||||||||  ||||||
seq2  GCACTTATGCACACATAAATAAATATTTTTCTAAAGAGCAGGGAGTGGTG  350

seq1  GTGCACACTCTTAATTCCAGCACTCAGGAGGCAGAGACAAGGCAGCTTGC  399
      | ||||||| |||||||||||| |||||| |||||||| ||||||| |||
seq2  GGGCACACTGTTAATTCCAGCAGTCAGGATGCAGAGACCAGGCAGCCTGC  400

seq1  TGTGAGTTTGAGGCCAGATTGGTCTATAGAATGAGTTGCAGGGGCTACAC  449
      |||||||||||||||||||||||||||||||||||  ||||||| |||| 
seq2  TGTGAGTTTGAGGCCAGATTGGTCTATAGAATGAGCCGCAGGGGTTACAA  450

seq1  TGAGAAAATCTGTCTCCAAAAACCAAAGAAGTGGGGGAGGGCCCGAAGCG  499
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAAATCTGTCTCCAAAAACCAAAGAAGTGGGGGAGGGCCCGAAGCG  500

seq1  AGGGGAGGGAAGCTAGTAATGAGAGCTCCTACACGCCTCTGCCTCAGCTC  549
      |||||||||||||||||||||||||||||||||  |||   |||||||||
seq2  AGGGGAGGGAAGCTAGTAATGAGAGCTCCTACAGTCCT-ACCCTCAGCTC  549

seq1  CTGCCTCCAGGTCCCTGCCCTGTTTGAATTC  580
      |||||| ||||||| ||||| || |||||||
seq2  CTGCCTTCAGGTCCTTGCCCGGTGTGAATTC  580