BAC Information

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BAC

Clone NameB6Ng01-292I15
Chromosome7 (Build37)
Map Location 47,421,852 - 47,608,869
singlet/doubletdoublet
Overlap geneEG628161
Upstream geneLOC100038967, LOC620018, LOC100038914, EG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik
Downstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292I15.bB6Ng01-292I15.g
ACCGA089153GA089154
length1,152960
definitionB6Ng01-292I15.b B6Ng01-292I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,421,852 - 47,422,998)(47,607,913 - 47,608,869)
sequence
gaattctttctggagtacccaagagcaaggaattcgagcccttgcacttt
ccagtttctagaagtatcttgcgttcctcggttcatggttccttcttcca
tcttcaaaaccagcaaactatctattgcgtatttaagttataaagatgct
gtgtactcactcatgctatactgtgacagcttctgctaataggttgtctt
ctgaggccaaggagctctggctatgtttcattatgtaacgcaacctccct
acatccctgtcccctgacctaccttgacatcaaaattccatcttgtttca
ttatctttgcttgaaaattgtatctaaaatgacctttccaagaaaatgtc
ggcctttggtgacttgtaagacaggaagtaatgcagatacaggggataga
tgagatactgttctgagttacaaatgtctgttcaaattccctgcagagaa
tagtgcacatagatctttctcactcccgagactcaggtccatctttgtga
gatcagcctgcttcatgatgtgcttagtaaatccagaatccagattgtga
agtggcataggagctagctttagaatatcacaggaggatagaagtgaggc
atattgaccaagctagtaccaagaaacctctcctgttggatgtggtgact
tctactaagcagggagttggggactggtttccaacattctgcctactcat
tctgctttttttttctttcaaaatttttattaggtattttctttatttac
atttcaaatgctatcccaaaagtcccccataccctcccctaccccccgac
tcccgtaactacccattcccacttcttgtccctggtgttcccctctactg
gggcatataaagtttgcaagaccaggggcctctcttcccaatgatggcta
actaggccatcttctgctacatatgcggctagagacactagctccgggag
gtactgggtagttcatattgttgttccacctatagggttgcagaatccct
ttagcttcctgggttacttttctctagctcctccatgggggccttgtgtt
tcaatccaatcgctggctggtgagcacacttctgtgtgtttgcaagcact
tgcatagccttcacaagagacagctaatatcaggttcttttcagcaaaat
ct
gaattctcttttttctggagctgtactgaatgagcatatgagtgatggat
gggaagtttgagcattgcatgtcccggactggaagacgacatgaacagtg
catgaaatgagaggaagagagaaaaagaagaaggaagagagggaggggag
aagagagaaggggtagatgctcgattgttctcattaatatttcaagtcct
tgtcataataaggctacaatgaagcagatatgccaagagaggagagccag
caacatggggaaggctacataaatgtggcatcattagcagaaatgggaat
gactaaaaccatcagactttcattgcagattgtttctctgctgggtacag
tgttatcccctccatggtttttggaacttcaggaacaattcctcacacag
cttggagacagcatctgtggggctgagatagtactcagcaaggtgacctg
acttggaaaacagggtgttctcacaaactatgccataaaagaagacataa
cacaaactgaaggaacgagtggcaaggaccagtggagaggactgagttgt
ggttcagcaacagagaatgtgccccaatgagagaccagaggtatggctca
atggtagaactcaagccagtggtacaatgaataaagcatcggactatcga
tcaaagaaaacagaataaaaagtatatttttagaaacccagaacattttc
taatttccatctctgttcctaagtgattaaatgcttcttttttgtttggg
catcatttttgagtcatgggagactttgagtggtaggaaaggatgcttct
tcctgtcatttacgaaggtgccaaagcatggaaagcacaacatgggaagc
caagtatctaagcagcatgacaattatcagggccattaatactcaaagtg
agtaacaaagtggcctgccagcactaaggcccacagagggtaggtcccac
caagctacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47421852_47422998
seq2: B6Ng01-292I15.b_44_1195

seq1  GAATTCTTTCTGGAGTACCCAAGAGCAAGGAATTCGAGCCCTTGCACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGGAGTACCCAAGAGCAAGGAATTCGAGCCCTTGCACTTT  50

seq1  CCAGTTTCTAGAAGTATCTTGCGTTCCTCGGTTCATGGTTCCTTCTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCTAGAAGTATCTTGCGTTCCTCGGTTCATGGTTCCTTCTTCCA  100

seq1  TCTTCAAAACCAGCAAACTATCTATTGCGTATTTAAGTTATAAAGATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAACCAGCAAACTATCTATTGCGTATTTAAGTTATAAAGATGCT  150

seq1  GTGTACTCACTCATGCTATACTGTGACAGCTTCTGCTAATAGGTTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTCACTCATGCTATACTGTGACAGCTTCTGCTAATAGGTTGTCTT  200

seq1  CTGAGGCCAAGGAGCTCTGGCTATGTTTCATTATGTAACGCAACCTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCAAGGAGCTCTGGCTATGTTTCATTATGTAACGCAACCTCCCT  250

seq1  ACATCCCTGTCCCCTGACCTACCTTGACATCAAAATTCCATCTTGTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTGTCCCCTGACCTACCTTGACATCAAAATTCCATCTTGTTTCA  300

seq1  TTATCTTTGCTTGAAAATTGTATCTAAAATGACCTTTCCAAGAAAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTGCTTGAAAATTGTATCTAAAATGACCTTTCCAAGAAAATGTC  350

seq1  GGCCTTTGGTGACTTGTAAGACAGGAAGTAATGCAGATACAGGGGATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTGGTGACTTGTAAGACAGGAAGTAATGCAGATACAGGGGATAGA  400

seq1  TGAGATACTGTTCTGAGTTACAAATGTCTGTTCAAATTCCCTGCAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATACTGTTCTGAGTTACAAATGTCTGTTCAAATTCCCTGCAGAGAA  450

seq1  TAGTGCACATAGATCTTTCTCACTCCCGAGACTCAGGTCCATCTTTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCACATAGATCTTTCTCACTCCCGAGACTCAGGTCCATCTTTGTGA  500

seq1  GATCAGCCTGCTTCATGATGTGCTTAGTAAATCCAGAATCCAGATTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCCTGCTTCATGATGTGCTTAGTAAATCCAGAATCCAGATTGTGA  550

seq1  AGTGGCATAGGAGCTAGCTTTAGAATATCACAGGAGGATAGAAGTGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCATAGGAGCTAGCTTTAGAATATCACAGGAGGATAGAAGTGAGGC  600

seq1  ATATTGACCAAGCTAGTACCAAGAAACCTCTCCTGTTGGATGTGGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGACCAAGCTAGTACCAAGAAACCTCTCCTGTTGGATGTGGTGACT  650

seq1  TCTACTAAGCAGGGAGTTGGGGACTGGTTTCCAACATTCTGCCTACTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAAGCAGGGAGTTGGGGACTGGTTTCCAACATTCTGCCTACTCAT  700

seq1  TCTGCTTTTTTTTTCTTTCAAAATTTTTATTAGGTATTTTCTTTATTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTTTTTTTCTTTCAAAATTTTTATTAGGTATTTTCTTTATTTAC  750

seq1  ATTTCAAATGCTATCCCAAAAGTCCCCCATACCCTCCCCTACCCCCCGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGCTATCCCAAAAGTCCCCCATACCCTCCCCTACCCCCCGAC  800

seq1  TCCCGTAACTACCCATTCCCACTTCTTGTCCCTGGTGTTCCCCTCTACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTAACTACCCATTCCCACTTCTTGTCCCTGGTGTTCCCCTCTACTG  850

seq1  GGGCATATAAAGTTTGCAAGACCAGGGGCCTCTCTTCCCAATGATGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAAAGTTTGCAAGACCAGGGGCCTCTCTTCCCAATGATGGCTA  900

seq1  ACTAGGCCATCTTCTGCTACATATGCGGCTAGAGACACTAGCTCCGGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCATCTTCTGCTACATATGCGGCTAGAGACACTAGCTCCGGGAG  950

seq1  GTACTGGGTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAG-ATCCCT  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTACTGGGTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGAATCCCT  1000

seq1  TTAGC-TCCTTGGTTAC-TTTCTCTAGCTCCTCCATTGGGGGCCCTGTG-  1046
      ||||| |||| |||||| ||||||||||||||||| |||||||| |||| 
seq2  TTAGCTTCCTGGGTTACTTTTCTCTAGCTCCTCCA-TGGGGGCCTTGTGT  1049

seq1  TTCCATCCAATCGCTGGCT-GTGAGCAACCACTTCTGTGT-TTGCCAGGC  1094
      ||| ||||||||||||||| |||||||  ||||||||||| ||  || ||
seq2  TTCAATCCAATCGCTGGCTGGTGAGCA--CACTTCTGTGTGTTTGCAAGC  1097

seq1  ACTGGCATAGCC-TCACAAGAGACAGCT-ATATCAGGGTCCTTTCAGCAA  1142
      ||| |||||||| ||||||||||||||| |||||||| || |||||||||
seq2  ACTTGCATAGCCTTCACAAGAGACAGCTAATATCAGGTTCTTTTCAGCAA  1147

seq1  AATCT  1147
      |||||
seq2  AATCT  1152

seq1: chr7_47607913_47608869
seq2: B6Ng01-292I15.g_64_1023 (reverse)

seq1  TGGTAGCTTGGTGGGAACCTACCCTCTGT-GGCCTTAGTGCTGGCTGG-C  48
      ||||||||||||||| ||||||||||||| ||||||||||||||| || |
seq2  TGGTAGCTTGGTGGG-ACCTACCCTCTGTGGGCCTTAGTGCTGGCAGGCC  49

seq1  ACTTTGTTACTCACTTTGAGTATTAAT-GCCCTGATAATTGTCCTGCTGC  97
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  ACTTTGTTACTCACTTTGAGTATTAATGGCCCTGATAATTGTCATGCTGC  99

seq1  TTTGATACTTGGCTT-CCATGTTGTGCTTTCCATGGCTTTGGCACC-TCG  145
      || |||||||||||| |||||||||||||||||| ||||||||||| |||
seq2  TTAGATACTTGGCTTCCCATGTTGTGCTTTCCAT-GCTTTGGCACCTTCG  148

seq1  TAAATGACAGGAAGAAGCATCCTTTCCTACCACTCAAAGTCTCCCATGAC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGACAGGAAGAAGCATCCTTTCCTACCACTCAAAGTCTCCCATGAC  198

seq1  TCAAAAATGATGCCCAAACAAAAAAGAAGCATTTAATCACTTAGGAACAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATGATGCCCAAACAAAAAAGAAGCATTTAATCACTTAGGAACAG  248

seq1  AGATGGAAATTAGAAAATGTTCTGGGTTTCTAAAAATATACTTTTTATTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAAATTAGAAAATGTTCTGGGTTTCTAAAAATATACTTTTTATTC  298

seq1  TGTTTTCTTTGATCGATAGTCCGATGCTTTATTCATTGTACCACTGGCTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTTGATCGATAGTCCGATGCTTTATTCATTGTACCACTGGCTT  348

seq1  GAGTTCTACCATTGAGCCATACCTCTGGTCTCTCATTGGGGCACATTCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTACCATTGAGCCATACCTCTGGTCTCTCATTGGGGCACATTCTC  398

seq1  TGTTGCTGAACCACAACTCAGTCCTCTCCACTGGTCCTTGCCACTCGTTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGAACCACAACTCAGTCCTCTCCACTGGTCCTTGCCACTCGTTC  448

seq1  CTTCAGTTTGTGTTATGTCTTCTTTTATGGCATAGTTTGTGAGAACACCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTTGTGTTATGTCTTCTTTTATGGCATAGTTTGTGAGAACACCC  498

seq1  TGTTTTCCAAGTCAGGTCACCTTGCTGAGTACTATCTCAGCCCCACAGAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCAAGTCAGGTCACCTTGCTGAGTACTATCTCAGCCCCACAGAT  548

seq1  GCTGTCTCCAAGCTGTGTGAGGAATTGTTCCTGAAGTTCCAAAAACCATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCCAAGCTGTGTGAGGAATTGTTCCTGAAGTTCCAAAAACCATG  598

seq1  GAGGGGATAACACTGTACCCAGCAGAGAAACAATCTGCAATGAAAGTCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGATAACACTGTACCCAGCAGAGAAACAATCTGCAATGAAAGTCTG  648

seq1  ATGGTTTTAGTCATTCCCATTTCTGCTAATGATGCCACATTTATGTAGCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTAGTCATTCCCATTTCTGCTAATGATGCCACATTTATGTAGCC  698

seq1  TTCCCCATGTTGCTGGCTCTCCTCTCTTGGCATATCTGCTTCATTGTAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATGTTGCTGGCTCTCCTCTCTTGGCATATCTGCTTCATTGTAGC  748

seq1  CTTATTATGACAAGGACTTGAAATATTAATGAGAACAATCGAGCATCTAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATGACAAGGACTTGAAATATTAATGAGAACAATCGAGCATCTAC  798

seq1  CCCTTCTCTCTTCTCCCCTCCCTCTCTTCCTTCTTCTTTTTCTCTCTTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCTCTTCTCCCCTCCCTCTCTTCCTTCTTCTTTTTCTCTCTTCC  848

seq1  TCTCATTTCATGCACTGTTCATGTCGTCTTCCAGTCCGGGACATGCAATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCATGCACTGTTCATGTCGTCTTCCAGTCCGGGACATGCAATG  898

seq1  CTCAAACTTCCCATCCATCACTCATATGCTCATTCAGTACAGCTCCAGAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTTCCCATCCATCACTCATATGCTCATTCAGTACAGCTCCAGAA  948

seq1  AAAAGAGAATTC  957
      ||||||||||||
seq2  AAAAGAGAATTC  960