BAC Information

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BAC

Clone NameB6Ng01-292L14
Chromosome7 (Build37)
Map Location 78,425,521 - 78,426,730
singlet/doubletsinglet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535, Mctp2, LOC100042873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292L14.bB6Ng01-292L14.g
ACCGA089288GA089289
length1,2021,142
definitionB6Ng01-292L14.b B6Ng01-292L14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagctgaaattatcatggtattttcatactttcaggtcttat
ataacttgtgagaaaggggtacaatttcatttgtctacctgtcaatttct
aattttgccagtagcaccccctctctagttatgttcttagaactttttcc
aaaaatcaattgactatagactcataatgtcatgttatttctgggcatga
ttgccatttcattcacctgcatggctgctgtggtttctttttatatgctg
gtgttaggtagtataatactcccctcccagatgtctcccttccttccttc
cttccttccttctctctctctctctctctctctctttctttctttctctc
ttcctttccttctttctcttagctagtcactgaccctcagccttcacctc
attccatgagtataaaggttgatgttggattctagggaaatctatgaagc
tatgaagctatattgtttacaaaataattctatttaagaacttcattcta
tatcaaataagttttaaaataaatagaaaagtattcttagtgtctgcaca
gtcacagtttccacagcacaggtggcttatatatagatagctactggggc
cactgaaatggttcagctgctgaaagcttatcaccaagaccaaccacctg
ggtttgactctctgggaccttcatagcagaaagagagaataaagtacagc
aagttgtcctctgacctctacatgtataccacagtgcccacatgccaatg
tggacacacacacacaaacacactagcattggctaaatacatacatacat
acatacatacatacatacatacatacacacatacataaaatgtaatttta
aattgtgtctgttaagaaaaatagaccccttatagagactcagcagagaa
gagagtccacaaataaaatgtgcaacatatttttttcacatcagcattta
cctaaggtgacaaattatttttgatataacaagatgttacctaatttctc
tcagaaaaaaagagaaaccgataatttcatatgtttaattctggaaaagc
aattcatcacttcttgatgagctcatcagtactaaagtatgagttgagaa
aatgtctacaccacaggtaaatagctgctcggcttccatacaaaccaaaa
atggatagtagccttcctttgtacttgtatatccttcagtgtgtgtgtat
ga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccatcatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgcccggggccctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcatagggctcc
caatggaggagctagagaaagtagccaagagctaaagggatctgcaccat
aggtggaacaacattatgactacagtaccccgagctctgactctagctgc
atatatatcaaaagatgcttagtcgcatcacttgaagagaggtcatggac
tgcactaaattgcccagaacagggaacgccgagggccaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78425521_78426730
seq2: B6Ng01-292L14.b_47_1248

seq1  GAATTCTCTAGCTGAAATTATCATGGTATTTTCATACTTTCAGGTCTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGCTGAAATTATCATGGTATTTTCATACTTTCAGGTCTTAT  50

seq1  ATAACTTGTGAGAAAGGGGTACAATTTCATTTGTCTACCTGTCAATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTGTGAGAAAGGGGTACAATTTCATTTGTCTACCTGTCAATTTCT  100

seq1  AATTTTGCCAGTAGCACCCCCTCTCTAGTTATGTTCTTAGAACTTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGCCAGTAGCACCCCCTCTCTAGTTATGTTCTTAGAACTTTTTCC  150

seq1  AAAAATCAATTGACTATAGACTCATAATGTCATGTTATTTCTGGGCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAATTGACTATAGACTCATAATGTCATGTTATTTCTGGGCATGA  200

seq1  TTGCCATTTCATTCACCTGCATGGCTGCTGTGGTTTCTTTTTATATGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATTTCATTCACCTGCATGGCTGCTGTGGTTTCTTTTTATATGCTG  250

seq1  GTGTTAGGTAGTATAATACTCCCCTCCCAGATGTCTCCCTTCCTTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGGTAGTATAATACTCCCCTCCCAGATGTCTCCCTTCCTTCCTTC  300

seq1  CTTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTCTC  350

seq1  TTCCTTTCCTTCTTTCTCTTAGCTAGTCACTGACCCTCAGCCTTCACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCTTCTTTCTCTTAGCTAGTCACTGACCCTCAGCCTTCACCTC  400

seq1  ATTCCATGAGTATAAAGGTTGATGTTGGATTCTAGGGAAATCTATGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATGAGTATAAAGGTTGATGTTGGATTCTAGGGAAATCTATGAAGC  450

seq1  TATGAAGCTATATTGTTTACAAAATAATTCTATTTAAGAACTTCATTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGCTATATTGTTTACAAAATAATTCTATTTAAGAACTTCATTCTA  500

seq1  TATCAAATAAGTTTTAAAATAAATAGAAAAGTATTCTTAGTGTCTGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATAAGTTTTAAAATAAATAGAAAAGTATTCTTAGTGTCTGCACA  550

seq1  GTCACAGTTTCCACAGCACAGGTGGCTTATATATAGATAGCTACTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTTTCCACAGCACAGGTGGCTTATATATAGATAGCTACTGGGGC  600

seq1  CACTGAAATGGTTCAGCTGCTGAAAGCTTATCACCAAGACCAACCACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAATGGTTCAGCTGCTGAAAGCTTATCACCAAGACCAACCACCTG  650

seq1  GGTTTGACTCTCTGGGACCTTCATAGCAGAAAGAGAGAATAAAGTACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGACTCTCTGGGACCTTCATAGCAGAAAGAGAGAATAAAGTACAGC  700

seq1  AAGTTGTCCTCTGACCTCTACATGTATACCACAGTGCCCACATGCCAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTCCTCTGACCTCTACATGTATACCACAGTGCCCACATGCCAATG  750

seq1  TGGACACACACACACAAACACACTAGCATTGGCTAAATACATACATACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACACACACACAAACACACTAGCATTGGCTAAATACATACATACAT  800

seq1  ACATACATACATACATACATACATACACACATACATAAAATGTAATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATACATACATACATACACACATACATAAAATGTAATTTTA  850

seq1  AATTGTGTCTGTTAAGAAAAATAGACCCCTTATAGAGACTCAGCAGAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTCTGTTAAGAAAAATAGACCCCTTATAGAGACTCAGCAGAGAA  900

seq1  GAGAGTCCACAAATAAAATGTGCAACATA-TTTTTTCACATCAGCATTTA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAGAGTCCACAAATAAAATGTGCAACATATTTTTTTCACATCAGCATTTA  950

seq1  CCTAAGGTGACAAATTA-TTTTGATATAACAAGATGTTACCTAATTTCTC  998
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTAAGGTGACAAATTATTTTTGATATAACAAGATGTTACCTAATTTCTC  1000

seq1  TCAG-AAAAAAGAGAAACCGATAATTTCATATGTTTAATTTCTGAAAAGC  1047
      |||| |||||||||||||||||||||||||||||||||||   |||||||
seq2  TCAGAAAAAAAGAGAAACCGATAATTTCATATGTTTAATTCTGGAAAAGC  1050

seq1  AATTCATCACTTCTTGATGAGCTCATCAAGTACTAAAGTATGAGTTGAGA  1097
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATTCATCACTTCTTGATGAGCTCATC-AGTACTAAAGTATGAGTTGAGA  1099

seq1  AAATGTCTACACCACA-GTAATAAGCTGCTTCGGGCTCCCATACAAACCA  1146
      |||||||||||||||| ||||  |||||||   |||| ||||||||||||
seq2  AAATGTCTACACCACAGGTAAATAGCTGCT--CGGCTTCCATACAAACCA  1147

seq1  AAAAATTGTATTAGTAG-CTTTCTTTGTAATTGTATA--CTTCAGTTGTG  1193
      ||||  || | |||||| ||| ||||||| |||||||  |||||| ||||
seq2  AAAA--TGGA-TAGTAGCCTTCCTTTGTACTTGTATATCCTTCAG-TGTG  1193

seq1  TAGGTACTAATGTATGA  1210
      |         |||||||
seq2  T--------GTGTATGA  1202


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